Basic Information

Insect: Polyommatus iphigenia
Gene Symbol: -
Assembly: GCA_963422495.1
Location: OY730188.1:35714065-35716829[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 3.8e-05 0.0036 18.7 4.3 1 23 87 109 87 109 0.97

2 18 0.007 0.66 11.5 3.4 1 23 116 138 116 138 0.97

3 18 0.0011 0.1 14.1 2.3 1 23 144 166 144 166 0.95

4 18 7.8e-05 0.0074 17.7 1.2 1 23 172 194 172 194 0.97

5 18 0.00054 0.051 15.0 1.4 1 23 200 222 200 222 0.96

6 18 0.0014 0.13 13.8 3.3 1 23 230 252 230 252 0.97

7 18 1.2e-05 0.0012 20.2 2.6 1 23 258 280 258 280 0.99

8 18 0.013 1.3 10.6 1.0 1 23 289 311 289 311 0.89

9 18 0.023 2.2 9.9 0.3 1 23 319 341 319 341 0.98

10 18 0.00098 0.093 14.2 3.7 1 23 347 369 347 369 0.97

11 18 0.0045 0.42 12.2 7.0 1 23 375 397 375 397 0.97

12 18 0.39 37 6.1 0.2 1 11 405 415 405 418 0.92

13 18 0.00026 0.024 16.1 3.6 1 23 434 456 434 456 0.99

14 18 0.001 0.1 14.1 7.4 1 23 462 484 462 484 0.98

15 18 6.2e-05 0.0059 18.0 5.7 1 23 490 512 490 512 0.98

16 18 3.8e-05 0.0036 18.7 2.4 1 23 518 540 518 540 0.98

17 18 6.9e-07 6.6e-05 24.1 0.3 1 23 548 570 548 570 0.97

18 18 9.6e-06 0.00091 20.5 4.4 1 23 576 598 576 598 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	3.8e-05	0.0036	18.7	4.3	1	23	87	109	87	109	0.97
2	18	0.007	0.66	11.5	3.4	1	23	116	138	116	138	0.97
3	18	0.0011	0.1	14.1	2.3	1	23	144	166	144	166	0.95
4	18	7.8e-05	0.0074	17.7	1.2	1	23	172	194	172	194	0.97
5	18	0.00054	0.051	15.0	1.4	1	23	200	222	200	222	0.96
6	18	0.0014	0.13	13.8	3.3	1	23	230	252	230	252	0.97
7	18	1.2e-05	0.0012	20.2	2.6	1	23	258	280	258	280	0.99
8	18	0.013	1.3	10.6	1.0	1	23	289	311	289	311	0.89
9	18	0.023	2.2	9.9	0.3	1	23	319	341	319	341	0.98
10	18	0.00098	0.093	14.2	3.7	1	23	347	369	347	369	0.97
11	18	0.0045	0.42	12.2	7.0	1	23	375	397	375	397	0.97
12	18	0.39	37	6.1	0.2	1	11	405	415	405	418	0.92
13	18	0.00026	0.024	16.1	3.6	1	23	434	456	434	456	0.99
14	18	0.001	0.1	14.1	7.4	1	23	462	484	462	484	0.98
15	18	6.2e-05	0.0059	18.0	5.7	1	23	490	512	490	512	0.98
16	18	3.8e-05	0.0036	18.7	2.4	1	23	518	540	518	540	0.98
17	18	6.9e-07	6.6e-05	24.1	0.3	1	23	548	570	548	570	0.97
18	18	9.6e-06	0.00091	20.5	4.4	1	23	576	598	576	598	0.97

Sequence Information

Coding Sequence: ATGGAGGTGTTGTCTGTGGTTGAGGAGGCCGTGTCACTGGAGCAGCTCGTTGGGGATCTGTTCCCGGACACGGACGAGCCACTCCCCATACACGACTTCGCCGACTTGGAATTGAGTCTAACACAAAGCGCGTTCACGAAACCCACAGAGTTCCTCGCGGAGCACAATAGGACCGACAAACAGAAGCAGCCGAGTGCGAGCGAGAACAAAGATTTGCAATTTTTCTTCGGTACGATAGAGAGGGACAGCAACAAACCGCACTCGTGCGACGTGTGCGGACTGAGGTTCTCGTACAGAAGCTACTTGAACAAACACAAGAAGAGGCACAACGGACAAGAGGACACCTACAGCTGCGATCGGTGCTTCCTCAAGTTTCCCACGCAGAAACTACTCAAACAACACAAAACGAAGCACACAGTCATCTTCCAACACTTCTGCAACGCGTGTGATGCCAAATTCACCTCCAAGAGTGGACTGAAAGCGCACAAGAAGTTGCATGCGGACGAGAGGCCATTCCCTTGTGACTCGTGCCCCAAGAAGTTCACTTCGCAAGTGTACTTGGACAAGCATAAGAGGCTACACTCCTCGGACGAGTCTCACGCTTGCAGTCAATGCGGGAAACGATTCGCAGCCGAACTGTCCTTGAAGATACACAGGAGGAAGCACGCGACGACCAGCACCAGGAACCACTACTGCGAGATCTGCATGAAGAAATTCACGTCGGAGGCATATCTGAAGATCCACAAGAAAACACACGCCGGCAACAAACTGTTCAAATGTAAGGTGTGCAAGAAGATATTCAGCTCGGAGATATATCTGAAGATACACCGACGGAAACACGCCCTGCCTCAAACCGATGCCGCTCACACCTGTGACGTATGCGACAAGGAGTTCAAGTCTCAGAACATTCTGGACATACACAAGACGGTCCACACGACGCATATCGACAGATCCTACAAATGCGACCTCTGCGGCGTCAAACTACCCACCAGGGATATACTGGAGCGACACAAGAGCAAACACAACGAGCGGAGCCTCCACAAGTGTACGGTCTGCCTCAAGATGTTCGCGTCGCGGAGATACCTGAACATCCACTACAAGCAACACCCCGACGATCGACCCTTCTCCTGCCACGTCTGCCACATGAGGTTCTCCCTCAACAAACACTTGATCGCCCACAAAAAACTCCACAAGGGCGAGAAGATCAAACTGTACAACTGTAACATCTGCCACGAGAAGTTCACCGCGAACATCCTGCCCGAACACAAAATAACGCACAAGCTGCTCGCCGACAGGCCATACAAATGCGATCGGTGCCCGCAGACCTTCACGCTCACCACCCATCTGAAGCTACACCAGAAGGTCCACTCCAAGACCACGGTATACAAGTGCGAGCACTGCCCGATGACCTTCGACAAGAGGTGGCACCTCCACAAACACGAGAAGTCGCACACCGACATCAAACCCTACGAGTGTGACATCTGCCACATGAAGTTCCGGCACAAGAGCCACGTGACCGTCCACGTCCGGATACACATGAACGCGAAACCCTTCCGTTGCAGGGTCTGCTACAGGCGGTTCCCCAATAACAGCGGGTTGAAACGGCACAAGCTGACTCACAGTAAAGTGAAGGATAAACCCCACGAGTGTGACGTTTGCGGTCAAGCGTTCGTTCGGAACAGCGACTTGAAGCGACACGCGCGCGCGCATACCGGCGAGCGACAATACGCGTGCTCCGTTTGCGACAAAAAGTTCTCGCAGAACTGCAACTTGACGCGACACAAAAAGTTGCACGAGACTTCACGAGACTAA
Protein Sequence: MEVLSVVEEAVSLEQLVGDLFPDTDEPLPIHDFADLELSLTQSAFTKPTEFLAEHNRTDKQKQPSASENKDLQFFFGTIERDSNKPHSCDVCGLRFSYRSYLNKHKKRHNGQEDTYSCDRCFLKFPTQKLLKQHKTKHTVIFQHFCNACDAKFTSKSGLKAHKKLHADERPFPCDSCPKKFTSQVYLDKHKRLHSSDESHACSQCGKRFAAELSLKIHRRKHATTSTRNHYCEICMKKFTSEAYLKIHKKTHAGNKLFKCKVCKKIFSSEIYLKIHRRKHALPQTDAAHTCDVCDKEFKSQNILDIHKTVHTTHIDRSYKCDLCGVKLPTRDILERHKSKHNERSLHKCTVCLKMFASRRYLNIHYKQHPDDRPFSCHVCHMRFSLNKHLIAHKKLHKGEKIKLYNCNICHEKFTANILPEHKITHKLLADRPYKCDRCPQTFTLTTHLKLHQKVHSKTTVYKCEHCPMTFDKRWHLHKHEKSHTDIKPYECDICHMKFRHKSHVTVHVRIHMNAKPFRCRVCYRRFPNNSGLKRHKLTHSKVKDKPHECDVCGQAFVRNSDLKRHARAHTGERQYACSVCDKKFSQNCNLTRHKKLHETSRD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00289012;
90% Identity: iTF_01217676; iTF_00935011; iTF_00404022; iTF_00164572; iTF_00934045;
80% Identity: -