Basic Information

Insect: Cataglyphis hispanica
Gene Symbol: -
Assembly: GCA_004195275.1
Location: SGAY01007003.1:1-3930[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.039 5 8.5 0.1 3 23 515 537 514 537 0.94

2 10 0.0023 0.29 12.4 1.4 1 23 543 567 543 567 0.98

3 10 0.00089 0.11 13.7 0.9 1 23 573 597 573 597 0.94

4 10 0.00033 0.043 15.0 0.2 3 23 605 627 603 627 0.92

5 10 6.5e-05 0.0084 17.2 1.7 1 23 634 658 634 658 0.97

6 10 0.00027 0.035 15.3 0.7 2 23 666 689 665 689 0.95

7 10 4.7e-05 0.006 17.7 4.9 1 23 695 719 695 719 0.97

8 10 7.3e-06 0.00094 20.2 0.6 1 23 725 749 725 749 0.96

9 10 7.1e-05 0.0091 17.1 0.9 1 23 755 777 755 777 0.99

10 10 0.44 56 5.2 0.1 1 23 864 889 864 889 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.039	5	8.5	0.1	3	23	515	537	514	537	0.94
2	10	0.0023	0.29	12.4	1.4	1	23	543	567	543	567	0.98
3	10	0.00089	0.11	13.7	0.9	1	23	573	597	573	597	0.94
4	10	0.00033	0.043	15.0	0.2	3	23	605	627	603	627	0.92
5	10	6.5e-05	0.0084	17.2	1.7	1	23	634	658	634	658	0.97
6	10	0.00027	0.035	15.3	0.7	2	23	666	689	665	689	0.95
7	10	4.7e-05	0.006	17.7	4.9	1	23	695	719	695	719	0.97
8	10	7.3e-06	0.00094	20.2	0.6	1	23	725	749	725	749	0.96
9	10	7.1e-05	0.0091	17.1	0.9	1	23	755	777	755	777	0.99
10	10	0.44	56	5.2	0.1	1	23	864	889	864	889	0.96

Sequence Information

Coding Sequence: ACAGAGGCGATCGACGAGAACGTGAGCGATAAGAAAAATGGAGCGCGCTCTGATAAGCGCAACGACAATCGCACGTGCAACGCCCGGGCTTCCGGAGCGAAGCTACTCCTCGCCgtgagcaaaaaaaataatgctctGTCGAATGTCGTTGTCGTTCCTAGGCTTCCTCCGCAGTGCTGGCCACGGGGTGGACCATCAATGTCTTGCAGAGGAGCCGCCGCCATCGTCGCCTGCACGTCGAGACGACGCAGTCGGGAGAAAATCGGTTCCGAGGCAACGGAATGCGTGCCTTCCGACACGCTCTTTGCCCTGTCGAAGACGGAGGGGATCGCTAAGAAGGATAGAAGAATTAGGAAAAATGAGGCTTGGCACCAGACGACGGTCAGCAAGAGCGCCGACGTCGTCGAGACGGTAGCCGATTTTGAGAAATGGCTGAAGATGCGCAACACGGAGCCATCGGTATCAACAAGCATGGATCTGGACGCGGCCAAGGTGGTGGAGGGTGTTGATCGGTATCTGAGCGAGGAGGTGCTGTCGCATGGCTACTTTCTAAGTAAGGATCCGTATGGTTTGTCCATCGACATCGATCTGGCAGATGCCAAGAAGCTCAATTTGTCATCGGGCTATGATCCGATACTGCAGGATCTGACACAGAGTGAGAATCGATTACTAGAACCTCCATGCGAGAAGGTCGTCGATGAGTTCATGCTGCCAGAATTTCAATTGGATCATCTAGATCCTCTGGCAGCGCTCTCATCAGATGACATGATGGTAGCCGGTGAGATCCTACCATCCACCAGCAGCCAatcgatattaaatcaaatagaGAACCAAGACGTTGAACAAATTGCTCCAAAAATGGAAGTTTTAGAGCGTAACACTGAAGTAGCCTGTGAGAAATCTACGCAGGTTGCTCTCAATGAAATACCAGTGAATTTAGAAGCAATGAATAAGATGGAGGATATAAAGTCAGAGCAGGAAACTGCGATACAGTGTTCAAGAAGTTCTTCGGAACTTTTTATTGAGGCGTTATCATCGATAGAGGAGAACTCACCGAATTCCATAGAAACAGATACTCAAAGTAGCATAATAGAACAATTGAAATCGAAGACTAGAATGAAACTTGAACCGCGTATCATTAAAAAGCGTCGGCAGATGACGGAACGATTAGAGAAGAAGCTTGACAAGCACATCAACGGAAAGAGTTTCACCAATACGGATTCGCAGGATGGCGTAATGGCTGTGGTTGCCATATCTACTGATAAAATATCCAACACGACGCAGATTGTCATCAACACCGGAACGGAGAAGCAAATCTATCAGGGCAAAACTTCGGAGCTGATCGAAGCAACAGGCAACTTTCCGAAATTGCCCAAGATAGATACATCTACTGCGATCTGGAACGGTAACATCGAGTATAATGTTGATAATAATCCGAGTAGCTCGTACGAAATTGTCATATCCAATGCGCTGGAGGAACTAGGCATCACCGATGACAGTTTGCAACCTGTAAGCGTTACCGAGCACGACAAAGTATGGCTCTGCCCGCGAGCCGGTTGCAACAGGCAATTTGGTAGACTGTACACTTTAAAAGGTCACTTGTTGGCTCATTATGGAGTTAGACCGTTTAAGTGTGACTTCGAAGGCTGCACTTGGGCCTTTTATTCCGAATTCAAGTTAAAAAGACATAAGGAGACGCATCTGAAGCGCAAGGATCATGTGTGCCAAGTGGAAGGTTGCAACCGTCGTTTCACCACTGTCTACAATCTGTGGAGCCACGAGAAATTACATAGTCGTCCAAACCGGATTGTTTGCCAGGTACCGAACTGTGGCGAAAAATTTCAGACGAAGCGGGCACTGGAACTGCATATGAAATCGCATGATCAACGCCACGCGCCTTATGTTTGCCAACACGAAGGTTGCGGCAAGCGTTACTACAGCAGCAACGCGTTGACGTCTCATCAGCGATCGCACAGCTATAAAGAAGTGGACATCAAGTGCTCGTGGCCGGGCTGCGGGAAAGTTTTCGATAAACCGTGCCGACTCAAGGCCCACACGCGCTCTCATACCGGCTGCAAACCTTACCATTGTACGTTTCAGGATTGCAAATGGGCATTTTCATCATCCAGTAAACTTAAGCGCCATCAGAAGAAGCATACCAACGAACGCAAATTCATGTGTGATGCACCGGACTGCGGTAAGGCTTTCATGCGTTCGGAACATTTAAAGGAGCACCGGCTGACACATAAGGAAGGCCGATTTTTCCAATGTTTTGTATGCGATGCTCGATTCTCTGCCAAGAGCAGTCTTTATGTGCACATTAAAAAGCATCAGCAGACCAAGACGGACGTAAGCCTAGCCGACAATGTGCCGACAGAATTCGGCTATACTTCCGGCGATCAGAAACGTTCGAAAACGGACGAATCTGATTGCTTGCGAGTGAAACCGATCGTCAAGCCGAAACAAAAATCCACGGAACTAACGAATGCCATAGAAACTGTCACGAAGGAAGATGACGCCGAGAAGCCGAATACGATATGCGACATCAGTACGCGTTCCCAGAATTCTCAGGATCAACTGGAATGGTTGTATCGTTGTCCGATAGAGATGTGCGATTATCTGATTGGAAACGAGACGAGTCTACGCGAGCACTTACTGAAGATGCACGGTATACATTGCGACGATCTGCTGGATAAGCCGTCTTCGGACGTTACTAATACAGACTACATTCTATATGCGGTGCACGAATCACCCCCAACTTCGCCAATCGCCATCGAGGAAGAACAGATGGTTATGGTAACACCATGCGACGCCGTTATCCTCGGCACCTCGTCATCAAGCGCGGATCGTCGATGTCTACCGGAACCGGAACCGCCACCTTTCAATACTTTACTTAAGAGTTCGGAATCGCTACATACCGATGTCTGTGCCGAGCAAATTGACAAGGGAATTCTATCGATCAAGAAAGATCAGAATTCTGCGAGGACAGATCTGACATATTCGGATTGGTCCAGGCTGAAGAAAAACGGCACACTGACGGATTCGATAGTGACAAACACATCGGATGTTGCACTGGGTACAAGTAGTGATCTGAGCGAGAATCTATTGCTCACGGAGGAATTACCATCGATGTATTATCAGGACGATGTGGCAGGTACGGAATATCAGGTGTTATTATTGGACTCGAGTCCACTTGAGAGTGCCGTTAATTTGCGCGGTCTCGAATGA
Protein Sequence: TEAIDENVSDKKNGARSDKRNDNRTCNARASGAKLLLAVSKKNNALSNVVVVPRLPPQCWPRGGPSMSCRGAAAIVACTSRRRSREKIGSEATECVPSDTLFALSKTEGIAKKDRRIRKNEAWHQTTVSKSADVVETVADFEKWLKMRNTEPSVSTSMDLDAAKVVEGVDRYLSEEVLSHGYFLSKDPYGLSIDIDLADAKKLNLSSGYDPILQDLTQSENRLLEPPCEKVVDEFMLPEFQLDHLDPLAALSSDDMMVAGEILPSTSSQSILNQIENQDVEQIAPKMEVLERNTEVACEKSTQVALNEIPVNLEAMNKMEDIKSEQETAIQCSRSSSELFIEALSSIEENSPNSIETDTQSSIIEQLKSKTRMKLEPRIIKKRRQMTERLEKKLDKHINGKSFTNTDSQDGVMAVVAISTDKISNTTQIVINTGTEKQIYQGKTSELIEATGNFPKLPKIDTSTAIWNGNIEYNVDNNPSSSYEIVISNALEELGITDDSLQPVSVTEHDKVWLCPRAGCNRQFGRLYTLKGHLLAHYGVRPFKCDFEGCTWAFYSEFKLKRHKETHLKRKDHVCQVEGCNRRFTTVYNLWSHEKLHSRPNRIVCQVPNCGEKFQTKRALELHMKSHDQRHAPYVCQHEGCGKRYYSSNALTSHQRSHSYKEVDIKCSWPGCGKVFDKPCRLKAHTRSHTGCKPYHCTFQDCKWAFSSSSKLKRHQKKHTNERKFMCDAPDCGKAFMRSEHLKEHRLTHKEGRFFQCFVCDARFSAKSSLYVHIKKHQQTKTDVSLADNVPTEFGYTSGDQKRSKTDESDCLRVKPIVKPKQKSTELTNAIETVTKEDDAEKPNTICDISTRSQNSQDQLEWLYRCPIEMCDYLIGNETSLREHLLKMHGIHCDDLLDKPSSDVTNTDYILYAVHESPPTSPIAIEEEQMVMVTPCDAVILGTSSSSADRRCLPEPEPPPFNTLLKSSESLHTDVCAEQIDKGILSIKKDQNSARTDLTYSDWSRLKKNGTLTDSIVTNTSDVALGTSSDLSENLLLTEELPSMYYQDDVAGTEYQVLLLDSSPLESAVNLRGLE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00280718; iTF_01245426; iTF_00729558; iTF_00730267; iTF_00730976; iTF_01077701; iTF_00110022; iTF_01255032; iTF_00869114; iTF_00868316; iTF_00867678; iTF_00264520; iTF_00265223;
90% Identity: iTF_01077701;
80% Identity: -