Basic Information

Insect: Cantharis rufa
Gene Symbol: RREB1
Assembly: GCA_947369205.1
Location: OX376303.1:91733433-91739052[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.0048 0.64 11.6 1.4 1 23 90 112 90 112 0.95

2 15 0.0098 1.3 10.7 0.1 1 23 125 147 125 147 0.97

3 15 4.6e-06 0.00061 21.2 3.1 1 23 153 175 153 175 0.98

4 15 0.0019 0.26 12.9 1.9 2 23 278 300 278 300 0.90

5 15 0.35 47 5.8 0.7 1 19 349 367 349 368 0.89

6 15 0.04 5.3 8.8 0.2 1 23 500 522 500 522 0.97

7 15 0.0039 0.52 11.9 0.7 1 23 531 553 531 553 0.96

8 15 0.0044 0.59 11.8 3.7 1 23 559 582 559 582 0.97

9 15 0.00036 0.049 15.2 1.5 1 23 988 1011 988 1011 0.96

10 15 0.00025 0.034 15.7 0.6 2 23 1238 1259 1237 1259 0.97

11 15 0.37 49 5.7 7.1 1 23 1265 1288 1265 1288 0.97

12 15 0.0001 0.014 16.9 1.2 1 23 1317 1341 1317 1341 0.97

13 15 0.29 39 6.0 2.5 1 23 1406 1429 1406 1429 0.94

14 15 0.017 2.3 9.9 0.4 3 23 1477 1497 1475 1497 0.93

15 15 0.014 1.8 10.2 7.8 1 23 1503 1525 1503 1525 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.0048	0.64	11.6	1.4	1	23	90	112	90	112	0.95
2	15	0.0098	1.3	10.7	0.1	1	23	125	147	125	147	0.97
3	15	4.6e-06	0.00061	21.2	3.1	1	23	153	175	153	175	0.98
4	15	0.0019	0.26	12.9	1.9	2	23	278	300	278	300	0.90
5	15	0.35	47	5.8	0.7	1	19	349	367	349	368	0.89
6	15	0.04	5.3	8.8	0.2	1	23	500	522	500	522	0.97
7	15	0.0039	0.52	11.9	0.7	1	23	531	553	531	553	0.96
8	15	0.0044	0.59	11.8	3.7	1	23	559	582	559	582	0.97
9	15	0.00036	0.049	15.2	1.5	1	23	988	1011	988	1011	0.96
10	15	0.00025	0.034	15.7	0.6	2	23	1238	1259	1237	1259	0.97
11	15	0.37	49	5.7	7.1	1	23	1265	1288	1265	1288	0.97
12	15	0.0001	0.014	16.9	1.2	1	23	1317	1341	1317	1341	0.97
13	15	0.29	39	6.0	2.5	1	23	1406	1429	1406	1429	0.94
14	15	0.017	2.3	9.9	0.4	3	23	1477	1497	1475	1497	0.93
15	15	0.014	1.8	10.2	7.8	1	23	1503	1525	1503	1525	0.98

Sequence Information

Coding Sequence: ATGCAAGGTACAATAGTAATGCCTGATGAACATCTACAGAGCAGCACTCCACCGCCAAATAAAAGCAACGATCCCCAAAATAATATGGATGTATCTCCAAAGTCTACTTTAGCAACCAAAGATTTTCATGTGAACCAAAGCAACCAAAGCGATTCGGGTATTTTATCTGCTACCGGCACTTCTACGTACACGGATATGGACGTTAGCAATCGTTCTGAAAACGAAGAAACCGACAACAGAAGCAGCTGTAGTTCCCCAGATCGCAAATTTTTGTGTTCCATTTGCGAGACAATTTTAACGTCCCAACACGAATTCACTCTTCACATACGATCTCATAACAACGAAACGGAGGCGCAAGACAACGAAAAGGGTTTTGTATGCCGCATTTGCTTCAAAATTTTAAGTTCGGCTGCCAGTTTGGATAGGCACGTGCTTATACACAGTGGCGAGAGACCTTTTCCATGCAAATATTGCGGTGACACGTTTACTACAAATGGAAACATGCATCGCCATATGCGTACTCATACGAATAAAACAAATTATGAATCGGACGGAAGCTCAGACAGTGGCGCAAGCTGCAGTTCCAAAACTGTGGAATATAATAATAACAAAGTGATACCAAAAATTGATATCAATACCAGTTACGATATCAGCAAAAAGCGAAATTGCACCAGCATAGACGAAATCAAAAATAATAAAAGAATTAAGTTACAAGAACCATCGTACGATTCTAGTCAAACTTATGCTTGTCCTGTATGCAGACGAGACGATTTTACTTCCACCGATATTCTGGAAATACATTTGGAAGATAATCACCCGGATTTTCCTGCAAAATGCAACATTTGCAATAAATCGTTTAAAAATTTGAAAGTATTAAGAGAACACAAATTTAACGTACACACCAAAAATGGAAGCAAACACCAGAAGAATTCCGTCCTTGGATTTCAAAATTTAACTTTCGTTGATTTTTCGAGCCAAAAATTTCCTTATATAGCCAAGTACGAATGCGAAAAAAATTTACACAAACCTGCTAGTGCACCAAAATTCCAATGCAATAAGTGTTCAAGAGCATTTCCGTGCTCCATGTCTCTTGAAATTCACGTTCCCGATTGTACGGCAAGTTTGGATTTATCGACAAAACCAAAGTTGCACTCCAGCGATGAAAAAGAATCCGAAAAAGATGTCTACAGGAATGATTTCTTTGCCCGATTAGATCTTCAAAGTAAATTGCAAAAATCGGAAGACGGAAGAGAAGATCAATTATTAAAATACAACACCAACATTTTACCTCCATCCGATACTAAAGATTTAGCCGACATACAATCTATCATTTCAATTACCACTAATGGAAGTTTATTGCACCAACTTCAAACGAATCCAAACGAATTGAATTCGATAAAACAAGAAAGTGAACTCGACACTTCCAGAAACGAGAACGACGAAGAATCGCAAGATATATTTGCAACTGAATTTCGTAAAATGAAAATTCGTGGCGAATTTCCCTGTAGACTTTGTCGGGCCGTGTTTCCTAACTTGCGAGCTTTAAAAGGCCACAACAGATCTCATTTAAATGGAAACAACAACGGAATGTATCTCTGCAATATGTGCCCTCACTCGTCTTTAGACAAAGCAGCTTTAATAAGACACATGAGAACGCACAACGGTGATCGTCCTTACGAGTGCTCGCTCTGTAAGTACGCTTTCACAACGAAAGCAAATTGTGAAAGACACCTCAAAAATAGACATGCCAAAAATACACGAGAAGAAGTGAAGAAAGCCATTATTTATCATCCATCTGAAGATCCCAGCAACGAAGAAATAAGTAAAATGTTGTCGCATGAAGAAACAAACAAAGCACTTCTTCTCTCGAATACTCACAAAAGCGTTAACAAACCGACTGATAAAGTAAAAATAATGACACCAAATATTACAAATCTTCTAGTTACAAGTCCAACAAAAAACCCCATTTCATCTGAAAATATAAACAGTTTCAACATCGAAGCAAATATTTCCCGATGTTATTCTACAAATGAAATTCCGCATAAAGACAATCTGATCGTACCGCCTCAAATTGTGCCTTCTTACTCACCACAGTTTAACTTTTATCCCAAACTTGAAAATACTTCAACGCCACAAAAAACTTTACCCAAAATTAACGTAAAAAATATTGAATCGCTAATTACTCCGGAGCAAGAAGCCAATGAAAATTTGAATAATTCCGATTGCGAATCGATGGAATGCGACGATCAACCCATGAACTTAGTTTTGGATTTAAGCAAGAAGAAATCGGAACCCGTACGCAGCACCCATCAAGAAATTCAGAAGGTGTCGCCAGTTATGGATCATCCCCAAGATTTGTCAAAAAGAAGTACCGAAATTCCAATGGCAAGCCAAAACGAAATTTTAACTCAAAATCTATTAAAATCGACAGCAAAATTAGATCCAGCTGCATTATATGCTTCTCAATTAGCTTTATACCGAAACGGATTTCCCCCGTTGCATTCTTTACACACCTGGCCTTTTTCATTAAATCCGTTATTATTTCAATCGATGTCGTCGCCACTGTTAACTCAAGATCCCCAAGAAATAAAAGAACGATTGCAACGTTTACAATTATGCGGAGGAGGCATGATTATGGATAATTTTGCCGAAAGATTTAAAAATTATCACCATTCCATAAATAATGCAAACTTAAACGCATTCAATAATTACAAAGTAAACGAAGTTCAACAAACTATGCACGATTCGAATTATTTGCACAGACCAGCCAAACCCGACGATGGTACACCTTTATCCTTATCGGTTGATCAAAGTCTGGCTGAAAACATGGCCTCGATGCACAGTCCCGGACAAATACCAAAGGCGGAATCGATTACCGGTTCGAGCTCAGTAAAAATGATTATCAAAAATGGTGTTTTGATGCCCAAACAAAAGCAAAGGCGATATAGAACAGAAAGACCATTTTCCTGCGAATATTGTTCTGCTAAATTTACGCTTCGCTCCAACATGGAACGTCACATCAAACAGCAGCATCCACAGTTTTGGCAGCAACGACATAAAGCAAGCATGGGAGCAGGTAGAAAGCCACAATCGAGTAGTACAAATCAAAAACAAAACTTTTGTAATATAAATATTCCAAATTATGACACACCGAAAAAACAAGAATATGGCGAACCAAAAGATAACCAAATAAGTGACAAAATTAAATATGCTATCCTTGCCCAACAATTGAAAGATTCGCACGATTATAAAACAACCAACAAAGGTGATATTAAAATTAAAGAAGAAGAGGATGAAGTGCCGTTAATAATTGACGAACCGAATGAAAATGCCAGTAAAATTGACGAGGGTGTCGATCGAAGGATAAATGATCATTTTTCTGATAAAAGCAAGCAATATGCCGATATGCACGCTTCAAATAGTCTCAATTTTAATTCCATAAAAAACGAAGAAACTCAAGACTTAGTTCCTGTTTCTCGATTATTGGACAACGCATCACAACAACCGTTTAAGAAATATTTTCATAGAGAAGCAGATGGACGTGAAGGAGGAGGTGTTAGCGAAGAAGACGAAGAAGGATTAGTTGCAAGTGGCAGCACCAGCGAAGAAAATAATTCCGGAACGGATGAAAATAGATCCGAATCGGAAAATGCCGTATTGCCCACACCTGTTAAGAAGAAGTCTGCATATTCCTTGGCTCCAAATCGTGTTACGTGTCCTTATTGTAAACGTAAATTTCCATGGACGTCGTCATTACGAAGACACATATTAACTCATACCGGACAAAAACCATACAAGTGCAGTCATTGTTCTCTGTTGTTTACCACCAAATCCAACTGCGATCGTCACCTTCTCCGAAAGCATGGAAATGCGGCTAGCGTTATTAATACTAACGATCAGTCAACCGGTTCGACAAATTTCATGATGCGAAATGTTCCTGATCGACCCTATAAGTGTCCCACTTGTCCCAGCAGCACATTTGCAACAAATTCAAATTTAAGAAAACATATGAGTACAAAACATTCGTTACCGGGTGTACCGAGCGATGATGCACAAGTTTCTCCTGGATACGAAGCCGGAAGTTCCGAGGACGAAAAGGTATCTCAAAGTGAACGGAAAAGTGAGTGGGAAAAGCAATTATTACCGAACAGTAAACCACTTCCATGTTCTAATACCGATCCCCAAAATATGCATTTACAAAATTCCGATTTACCGTTCAAATGTCACTTGTGCGACAATTCATTTGGAGAACGACACGACGCTTTGGATCATATCAAAGATAAACACAATTCCGAATACGAATTGCTGTTGTCAAAGAACGCATTGGATGTAAACGCCACCACTCCCGACGAGAATCCTCATCACGACGAAAATGAAGAAAGCGAAGTTCGTGGGAAATTTCCGGATTATGCAAACAGAAAAGTGATTTGTGCATTTTGCATGCGCCGATTTTGGTCCGCAGaagatttaagacggcacatgaggacgcacactggtgagagaccgttcagctgtgacgtttgccatcgtcgttttacattaaaacacagcatgttgcgacacagaaagAAGCACAACTTACAGTCGGAGAATGATCAAATCAACAGTGACGAGGATAATTGTGTAAATTTAAGTTCGTCATATAAGACAAACAATAACAATATGGAAAGAAAAACGGACGAGTCTGACGGTACCGAAAGTGACTTAATAAGCAACTTGTTGGGAATTCGCGATCGATCCATCATAGAACAAGTTTTAACTTCTTCTGCCGATGATGCAGCCAAATTATTAGGTGTTAAAAGTGGAGAATCGGAATAA
Protein Sequence: MQGTIVMPDEHLQSSTPPPNKSNDPQNNMDVSPKSTLATKDFHVNQSNQSDSGILSATGTSTYTDMDVSNRSENEETDNRSSCSSPDRKFLCSICETILTSQHEFTLHIRSHNNETEAQDNEKGFVCRICFKILSSAASLDRHVLIHSGERPFPCKYCGDTFTTNGNMHRHMRTHTNKTNYESDGSSDSGASCSSKTVEYNNNKVIPKIDINTSYDISKKRNCTSIDEIKNNKRIKLQEPSYDSSQTYACPVCRRDDFTSTDILEIHLEDNHPDFPAKCNICNKSFKNLKVLREHKFNVHTKNGSKHQKNSVLGFQNLTFVDFSSQKFPYIAKYECEKNLHKPASAPKFQCNKCSRAFPCSMSLEIHVPDCTASLDLSTKPKLHSSDEKESEKDVYRNDFFARLDLQSKLQKSEDGREDQLLKYNTNILPPSDTKDLADIQSIISITTNGSLLHQLQTNPNELNSIKQESELDTSRNENDEESQDIFATEFRKMKIRGEFPCRLCRAVFPNLRALKGHNRSHLNGNNNGMYLCNMCPHSSLDKAALIRHMRTHNGDRPYECSLCKYAFTTKANCERHLKNRHAKNTREEVKKAIIYHPSEDPSNEEISKMLSHEETNKALLLSNTHKSVNKPTDKVKIMTPNITNLLVTSPTKNPISSENINSFNIEANISRCYSTNEIPHKDNLIVPPQIVPSYSPQFNFYPKLENTSTPQKTLPKINVKNIESLITPEQEANENLNNSDCESMECDDQPMNLVLDLSKKKSEPVRSTHQEIQKVSPVMDHPQDLSKRSTEIPMASQNEILTQNLLKSTAKLDPAALYASQLALYRNGFPPLHSLHTWPFSLNPLLFQSMSSPLLTQDPQEIKERLQRLQLCGGGMIMDNFAERFKNYHHSINNANLNAFNNYKVNEVQQTMHDSNYLHRPAKPDDGTPLSLSVDQSLAENMASMHSPGQIPKAESITGSSSVKMIIKNGVLMPKQKQRRYRTERPFSCEYCSAKFTLRSNMERHIKQQHPQFWQQRHKASMGAGRKPQSSSTNQKQNFCNINIPNYDTPKKQEYGEPKDNQISDKIKYAILAQQLKDSHDYKTTNKGDIKIKEEEDEVPLIIDEPNENASKIDEGVDRRINDHFSDKSKQYADMHASNSLNFNSIKNEETQDLVPVSRLLDNASQQPFKKYFHREADGREGGGVSEEDEEGLVASGSTSEENNSGTDENRSESENAVLPTPVKKKSAYSLAPNRVTCPYCKRKFPWTSSLRRHILTHTGQKPYKCSHCSLLFTTKSNCDRHLLRKHGNAASVINTNDQSTGSTNFMMRNVPDRPYKCPTCPSSTFATNSNLRKHMSTKHSLPGVPSDDAQVSPGYEAGSSEDEKVSQSERKSEWEKQLLPNSKPLPCSNTDPQNMHLQNSDLPFKCHLCDNSFGERHDALDHIKDKHNSEYELLLSKNALDVNATTPDENPHHDENEESEVRGKFPDYANRKVICAFCMRRFWSAEDLRRHMRTHTGERPFSCDVCHRRFTLKHSMLRHRKKHNLQSENDQINSDEDNCVNLSSSYKTNNNNMERKTDESDGTESDLISNLLGIRDRSIIEQVLTSSADDAAKLLGVKSGESE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00271811;
90% Identity: iTF_00270402; iTF_00269080; iTF_00271811; iTF_01294305; iTF_01292707; iTF_00928123;
80% Identity: -