Cfla010150.1
Basic Information
- Insect
- Cantharis flavilabris
- Gene Symbol
- -
- Assembly
- GCA_949152465.1
- Location
- OX424436.1:3163045-3164107[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.4e-13 5.6e-11 43.1 0.0 7 40 5 38 4 42 0.92
Sequence Information
- Coding Sequence
- ATGCCGAATTACGaagCATTGCAACATGTGCGAAATAAACGAATGACCTTGAGAGAAGCCCAAGATGTCTACGGAATCCCAAAATCTACTTTGCAAAAtcatgttaaaaaaagttttaaaacttcaggGGGGCAATGTGTCCTTTCTGCACTAGAAGAACAAATGTTtgtcgatattattattgttgcatcTGAATGGGGCTACCCCTTTGAAAAAATCGATATAAGACTTCTAGTAAAAGGTTATCTAGACAGCCTTGGCCGCAGAGAACcacgatttaaaaataactttcctGGTGAAGACTGGTGCCTTAGGTTTATGAAATACCACAGGGCTAAGTTAACTGTTCGCCTAAGTGAAAACATCAAACGTTCTAGAGCAGCTGTCTCCAGGGACATATTAACCTATTAA
- Protein Sequence
- MPNYEALQHVRNKRMTLREAQDVYGIPKSTLQNHVKKSFKTSGGQCVLSALEEQMFVDIIIVASEWGYPFEKIDIRLLVKGYLDSLGRREPRFKNNFPGEDWCLRFMKYHRAKLTVRLSENIKRSRAAVSRDILTY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00271003;
- 90% Identity
- iTF_00268111; iTF_00268097; iTF_00268098; iTF_00268099; iTF_00268100; iTF_00268101; iTF_00268102; iTF_00268103; iTF_00268104; iTF_00268105; iTF_00268106; iTF_00268107; iTF_00268108; iTF_00268089; iTF_00268090; iTF_00268091; iTF_00268092; iTF_00268093; iTF_00268094; iTF_00268095; iTF_00268096;