Cfla000700.1
Basic Information
- Insect
- Cantharis flavilabris
- Gene Symbol
- -
- Assembly
- GCA_949152465.1
- Location
- OX424435.1:7013746-7014925[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1e-13 4.1e-11 43.5 0.0 6 39 26 59 24 64 0.91
Sequence Information
- Coding Sequence
- ATGGCCTGTGATAAGTTGTGTGGTCTCGAAGTTGATTGGGTTGATGTTTCCTGGGTCAACATGGGGTATGAAGTCGTAGaagCATTGCAACATGTGCGAAATAAACGAATGACCTTGAGAGAAGCCCAAGATGTCTACGGAATCCCAAAATCTACTTTGCAAAAtcatgttaaaaaaagttttaaaacttcaggGGGGCAATGTGTCCTTTCTGCACTAGAAGAACAAATGTTtgtcgatattattattgttgcatcTGAATGGGGCTACCCCTTTGAAAAAATCGATATAAGACTTCTAGTAAAAGGTTATCTAGACAGCCTTGGCCGCAGAGAACcacgatttaaaaataactttcctGGTGAAGACTGGTGCCTTAGGTTTATGAAATACCACAGGGCTAAGTTAACTGTTCGCCTAAGTGAAAACATCAAACGTTCTAGAGCAGCTGTCTCCAGGGACATATTAACCTATTAA
- Protein Sequence
- MACDKLCGLEVDWVDVSWVNMGYEVVEALQHVRNKRMTLREAQDVYGIPKSTLQNHVKKSFKTSGGQCVLSALEEQMFVDIIIVASEWGYPFEKIDIRLLVKGYLDSLGRREPRFKNNFPGEDWCLRFMKYHRAKLTVRLSENIKRSRAAVSRDILTY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00271003;
- 90% Identity
- iTF_00268112;
- 80% Identity
- iTF_00268112;