Cfla029348.1
Basic Information
- Insect
- Cantharis flavilabris
- Gene Symbol
- dl
- Assembly
- GCA_949152465.1
- Location
- OX424439.1:22743398-22745191[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-55 8.9e-52 176.6 0.0 1 168 32 198 32 199 0.98 2 2 0.39 2.2e+03 -0.4 0.0 94 122 315 344 295 359 0.68
Sequence Information
- Coding Sequence
- ATGGATTTTGATTCCGAACTTAACAGCCTTCTGAATGATTTTGAAccaagcaattttttgaaagaacTTCCTCCCCTAAAAGTGGAACCATACGTGAACATTGTAGAGCAACCAGCGAAAAGATCTCTCCGATTTAGATACTTAAGTGAAGGAAGATGGGCTGGTTCAATTCATGGAGCTAATCATACGGCACTCAAGAAAACCTTCCCAAAAATAGAAGTTGTTGGTTATCGTGGTAAAACTTCTGTGGAAGTTTCTTGTGTTTTGGATGATTATCCCTATAAgcAGCATCCGCATGAATTAGTTGGAAAGGAAGGATGTGCAAATGGAGTATGCAGATTACCCATTTCGGAAGAAACAATGtcattaacattttcaaatttaggtATTCACTGTACAAAAAAAGCTGACATCAAAAAATCACTAAACTTAAGGAAAGATATGGGAGTAGATCCATTCAAAGGTGGATTTTCTCATGCGTCTGAAATAACCGGAAAACGTTTAAAATCTCTGCGACTCTGTTTTCAAGTTTACCTAGAAGAAAATGGGAATAAAATTCCTTTGAAACCCGTGGTTAGTGATACAATTATTCATCAACAAAAGCCAAACAAACttgttattgtaaaattgtCGCACTGTGTTTGTCCAGCTTCTGGATCCGAACACCAAATCATGATATTTTGTGAAAAGATTGACAAGGACGACATAGAAATCCGTTTTTATAAGGAAAGCAATAGTGTACTGATATGGGAAGGTTTTGGATCATTTGAAGATAAAGATATTCATAAAGAATTTGGAATCAGTTTTAACGCTCCAAGTTATatagacgtaaatattacaaaaccAGTAGAGGTGTTCGTCCAATTAAGAAGACCTTCTGATGGTATCTGTAGCGAAGGATTACGTTTTGAGTATCTTCCGATTTCTACGAATTTAGTTCCCCCTAGGATAGGAGTTAAACGTTATAGGCGGAATGAACTAACTGATAGGTTAGAAGAATATCAAAAACAATtaaatttgGCATCAACCAGCAAGGTACAACATCATTCTAATTTGAAGTATAACTACAATCCACACGTAGATCAACCTTCCTATTCACGTAATAATGAATTTGAAACAATTCCAAGCTTGCTTCCAAGTTTCTGTCAGACGTGGGGATCAGTTGATCATTCAAATAGGTTTTTAAATACAAACAACTTAAGCTCCATGAACTTGATCGACTCAAATATTAGAGAagaaccaaaaattttaaatcaagaCGGATTATTACCTAGCGGATTTGCCAACATTCCATTAAATAATTTGTCCATAAAAAACAACGATATCGCCAACAATGCTATCCTTCCAGTAGAAAACACCCATGGAAGAGATTTCAACTGGCCGTTTAACAATAGTAGTACtgaaataagtttttaa
- Protein Sequence
- MDFDSELNSLLNDFEPSNFLKELPPLKVEPYVNIVEQPAKRSLRFRYLSEGRWAGSIHGANHTALKKTFPKIEVVGYRGKTSVEVSCVLDDYPYKQHPHELVGKEGCANGVCRLPISEETMSLTFSNLGIHCTKKADIKKSLNLRKDMGVDPFKGGFSHASEITGKRLKSLRLCFQVYLEENGNKIPLKPVVSDTIIHQQKPNKLVIVKLSHCVCPASGSEHQIMIFCEKIDKDDIEIRFYKESNSVLIWEGFGSFEDKDIHKEFGISFNAPSYIDVNITKPVEVFVQLRRPSDGICSEGLRFEYLPISTNLVPPRIGVKRYRRNELTDRLEEYQKQLNLASTSKVQHHSNLKYNYNPHVDQPSYSRNNEFETIPSLLPSFCQTWGSVDHSNRFLNTNNLSSMNLIDSNIREEPKILNQDGLLPSGFANIPLNNLSIKNNDIANNAILPVENTHGRDFNWPFNNSSTEISF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00270818; iTF_00272228; iTF_00269520;
- 90% Identity
- iTF_00270818;
- 80% Identity
- -