Clat017447.1
Basic Information
- Insect
- Cantharis lateralis
- Gene Symbol
- dl
- Assembly
- GCA_963170105.1
- Location
- OY720627.1:32142925-32144742[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.2e-56 5.1e-52 177.0 0.0 2 168 29 194 28 195 0.97 2 2 0.11 7.1e+02 0.8 0.0 94 134 311 352 290 358 0.69
Sequence Information
- Coding Sequence
- ATGGATTTTGATTCCgaacttaacaattttctgaACAATTTCGAACCAAGCAACCTTTTAAATCTGCAAGTGGAACCATACGTTATCATTGCAGAGCAACCAGCGAAAAGATCTCTCCGATTTAGATATTTAAGTGAAGGAAAATGGGCTGGTTCAATTCGCGGAGTAAATCATACGTCATCCAAAAAAACCTTCCCAAAGATTGAAGTTATTGGTTACCGTGGTAAAGCTTCGGTGGAGGTTTCGTGTGTTTTGGATGATTATCCCTACAAGCAGCATCCGCATGAATTAGTAGGAAAAGAAGGATGTGCAAATGGAGTGTGCAGACTACCCATTCCGGAAGAAACAATGTcgttaacattttcaaatttaggaATTCATTGTGTAAAAAAGGATGACATCCCAAAATCTCTACGCTTAAGGCAAGAAATAGGAATAGATCCATTCAAAGGTGGATTTTCTCATGCGTCCGAAATAACCAGCAAACGTTTAAAATCTCTGAGGCTAtgttttcaagtttatttagaagagaatggaaataaaattccttTGAAGCCAGTGGTTAGTGATACGATTATTAATCAACAAAAACCAAATAAGCTTGTGATTGTAAAATTGTCACACTGTGTTTGTCCAGCTACTGGGTCCGAACACGAAATCATGATATTTTGTGAAAAGATTGACAAGGACGATATACAAATTCGTTTTTATAAGGAAAGCAATAACCTGTTGGTATGGGAAGGTTTTGGATCTTTTGAAGATAAAGATATCCATAAAGAATTTGGAATCAGTTTTAAAGCTCCAAGTTATATAGacgtaaatattacaaaaccgGTAGAGGTGTTTGTCCAATTGAGAAGGCCTTCTGATGGTATTTGTAGTGACGGATTACGTTTTGAATATCTTCCGATTTCTACGAATTTAGTTCCCCCCAGGATAGGTGTTAAACGATATAGACGGAACGAACTAACTGACAGGTTAGAAGAATATCAAAAACAATtaaatttgGCTTCCACCAGCAAGGTACAACAGCATAGCAATCTAAAGTATGACTACAAGCCAAATGTGGTAGTAAATGAACCTCATCCTTATCCACGATATAATGAATTAGAAACTATACCAAGCTTGCTTCCAAGTTTCTGTCAGACGTGGGGACCGGTTGATCATtcaaatagatttttaaatacaaataacttGGGCCCTACGAACTTGATCGATTCGCATATTAGGGAGgaaactaaaaatgtaaatcaaaatgtattattatctAACGGTTTCGCCAATATTCCATTTAATGATTTGTCAATAAACAACAACGAGATTATCAACAATGACATCCTCTCAGAAGAAAACGCCCATGGAAGAGGGTTAAACTGGCTGTTGAACAATACTACCGAAATaagtttttga
- Protein Sequence
- MDFDSELNNFLNNFEPSNLLNLQVEPYVIIAEQPAKRSLRFRYLSEGKWAGSIRGVNHTSSKKTFPKIEVIGYRGKASVEVSCVLDDYPYKQHPHELVGKEGCANGVCRLPIPEETMSLTFSNLGIHCVKKDDIPKSLRLRQEIGIDPFKGGFSHASEITSKRLKSLRLCFQVYLEENGNKIPLKPVVSDTIINQQKPNKLVIVKLSHCVCPATGSEHEIMIFCEKIDKDDIQIRFYKESNNLLVWEGFGSFEDKDIHKEFGISFKAPSYIDVNITKPVEVFVQLRRPSDGICSDGLRFEYLPISTNLVPPRIGVKRYRRNELTDRLEEYQKQLNLASTSKVQQHSNLKYDYKPNVVVNEPHPYPRYNELETIPSLLPSFCQTWGPVDHSNRFLNTNNLGPTNLIDSHIREETKNVNQNVLLSNGFANIPFNDLSINNNEIINNDILSEENAHGRGLNWLLNNTTEISF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00267901;
- 90% Identity
- -
- 80% Identity
- -