Cnig025236.1
Basic Information
- Insect
- Cantharis nigra
- Gene Symbol
- dl
- Assembly
- GCA_958510845.1
- Location
- OY294033.1:11923226-11929156[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-54 1.1e-50 172.8 0.0 2 168 88 253 87 254 0.97 2 2 0.42 2.3e+03 -0.7 0.0 94 128 370 405 351 414 0.70
Sequence Information
- Coding Sequence
- ATGAAAAATGACGTCGATCGCAACACTTTCAAGTACCACGAAGGATTACGCACCATCCAATACCATAACGCTAACAGGCTCTCTCGCATGAAACCAGATACTCGTTCGCAACCACCCACAAGTGCGATGTCAGAAACCAAGAAAACATTTTTAGGTATCAAAGCTATGGATTTTGATTCCGAACTTAACAACCTTTTGAATGATTTTGAAccaagcaattttttgaaagaacTTCCGCCTGTAAAAGTGGAACCATACGTGATCATTGTAGAGCAACCAGCGAAAAGATCTCTCCGATTTAGGTACTTAAGTGAAGGAAAATGGGCTGGTTCAATTCGTGGAGCTAATCATACGGATCTCAAAAAAACATTTCCAAAGATTGAAGTTATCGGTTATCGCGGTAAAGCTTCGGTGGAAGTTTCTTGTGTTTTAGATGATTATCCCTATAAGCAACATCCGCATGAATTAGTTGGAAGAGAAGGATGTGCAAATGGAGTATGCAGATTACCCATTCCGGAAGAAACTATGTCgttaacattttcaaatttaggCATTCACTGTATAAAAAGGGCTGACATCAAACAATCACTAAACTTAAGGAAAGATATGAGAGTAGATCCATTCAAAgGTGGATTTTCTCATGCATCTGAAATAACtggaaaacatttaaaatctcTGCGACTCTGTTTTCAAGTTTACCTAGAAGAAAATGGGAATAAAATTCCTTTGAAACCCGTCGTTAGTGATACAATTATTCATCAACAAAAGCCAAATAAACTTGTTATTGTGAAATTGTCACACTGTGTTTGTCTAGCTTCTGGATCTGAACACCAAATCATGTTATTTTGTGAAAAGATTGACAAGGACGATATAGAAATCCGTTTTTATAAGGAAAGCAATAGTCTACTGATATGGGAGGGTTTTGGATCTTTTGAAGATAAAGATATTCATAAAGAATTTGGAATCAGTTTTAATGCTCCAAGTTATATAGATGTAAATATTACAACACCGGTAGAGGTGTTCGTTCAATTAAGAAGGCCTTCTGATGGTATTTGTAGCGAAGGATTACGTTTTGAGTATCTTCCGATTTCTACGAATTTGGTTCCCCCTAGGATAGGAGTTAAACGTTATAGACGGAATGAACTAACCGATAGGTTAGAACAATATCAAAAACAATTAAATTTGGCGTCAACCAGCATGGTACAACAGCATTGCAATTTGAAGTTTGACTACAATCCACATGTAGATCAACCTTCTTATTCACGCAATAATGAATTTGAAACAATTCCAAGCTTGCTTCCAAGTTTCTGTCAGACGTGGGGATCGGTTGATCATTCAAATAGGTTTTTAAATAGCAACAACTTAAGCCCCATGAACTTGATTGACTCAAATATTAGAGAagaaccaaaaattttaaatcaagccGGATTATTACCTAGCGGATTTGCCAACATTCCGTTAAATAATTTGTCTATAAACAACAACGATAGCACCAACAATGCCAGCCTACCAGTAGAAAACACCCATGGAAGAGAATTTAACTGGCCGTTTAACAATAATACtgaattaagtttttaa
- Protein Sequence
- MKNDVDRNTFKYHEGLRTIQYHNANRLSRMKPDTRSQPPTSAMSETKKTFLGIKAMDFDSELNNLLNDFEPSNFLKELPPVKVEPYVIIVEQPAKRSLRFRYLSEGKWAGSIRGANHTDLKKTFPKIEVIGYRGKASVEVSCVLDDYPYKQHPHELVGREGCANGVCRLPIPEETMSLTFSNLGIHCIKRADIKQSLNLRKDMRVDPFKGGFSHASEITGKHLKSLRLCFQVYLEENGNKIPLKPVVSDTIIHQQKPNKLVIVKLSHCVCLASGSEHQIMLFCEKIDKDDIEIRFYKESNSLLIWEGFGSFEDKDIHKEFGISFNAPSYIDVNITTPVEVFVQLRRPSDGICSEGLRFEYLPISTNLVPPRIGVKRYRRNELTDRLEQYQKQLNLASTSMVQQHCNLKFDYNPHVDQPSYSRNNEFETIPSLLPSFCQTWGSVDHSNRFLNSNNLSPMNLIDSNIREEPKILNQAGLLPSGFANIPLNNLSINNNDSTNNASLPVENTHGREFNWPFNNNTELSF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00267901;
- 90% Identity
- iTF_00267901;
- 80% Identity
- -