Basic Information

Insect: Camptogramma bilineatum
Gene Symbol: -
Assembly: GCA_958496255.1
Location: OY292450.1:5082714-5085074[+]

Transcription Factor Domain

TF Family: zf-GAGA
Domain: zf-GAGA domain
PFAM: PF09237
TF Group: Zinc-Coordinating Group
Description: Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 2.2 1e+04 -2.6 0.7 7 17 4 14 2 19 0.75

2 12 0.00053 2.5 8.9 0.2 21 48 176 203 171 205 0.90

3 12 0.0004 1.9 9.3 0.1 20 45 204 229 200 234 0.87

4 12 0.011 53 4.7 0.1 21 50 271 300 267 305 0.90

5 12 0.0027 13 6.7 0.1 21 48 393 420 391 426 0.91

6 12 0.31 1.5e+03 0.1 0.0 26 48 427 449 421 452 0.88

7 12 0.004 19 6.1 0.0 21 48 491 518 488 522 0.88

8 12 0.11 5.1e+02 1.5 0.0 23 46 534 557 529 563 0.85

9 12 0.43 2e+03 -0.4 0.0 24 51 620 647 615 648 0.81

10 12 0.00033 1.6 9.6 0.1 21 46 645 670 635 676 0.90

11 12 0.23 1.1e+03 0.5 0.1 21 45 701 725 695 730 0.85

12 12 0.0089 43 5.0 0.2 21 45 730 754 726 762 0.88

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	2.2	1e+04	-2.6	0.7	7	17	4	14	2	19	0.75
2	12	0.00053	2.5	8.9	0.2	21	48	176	203	171	205	0.90
3	12	0.0004	1.9	9.3	0.1	20	45	204	229	200	234	0.87
4	12	0.011	53	4.7	0.1	21	50	271	300	267	305	0.90
5	12	0.0027	13	6.7	0.1	21	48	393	420	391	426	0.91
6	12	0.31	1.5e+03	0.1	0.0	26	48	427	449	421	452	0.88
7	12	0.004	19	6.1	0.0	21	48	491	518	488	522	0.88
8	12	0.11	5.1e+02	1.5	0.0	23	46	534	557	529	563	0.85
9	12	0.43	2e+03	-0.4	0.0	24	51	620	647	615	648	0.81
10	12	0.00033	1.6	9.6	0.1	21	46	645	670	635	676	0.90
11	12	0.23	1.1e+03	0.5	0.1	21	45	701	725	695	730	0.85
12	12	0.0089	43	5.0	0.2	21	45	730	754	726	762	0.88

Sequence Information

Coding Sequence: ATGGAAAGAAAAAAACCCCCCGGAACACCCTTGAGACGGACCAAGGAAAAAATGCCCCTGTACATCCAGGTGCATTATGTAGGTAGACCACAGGCGGGGACTGGTATTATTTATTCTACTGGTATATTAATAGTGGTTTTTTTATCCACAGACCTACCTACAGTGTCTGAAGACAATGATTCAGAATCGGACCCCTTAGAAGCTGTCAAAATCGAAGATATCGATGAAAGTCTATCTATCCCTTACCAATGTGACGATTGTCCGAGAAGATTCAACTCAGCTAAAGATCTTGAAAGGCATAAAATCACTCATAAAAAGATACACAAAATTAACACCGATTCAGAATTGATAAATAATGATGAAGAGTATTTGGGTGATGAAAAGTCTGTAGAAGAGTTAGAGAATGAGAAATGTGACGCGGAGAGTCTGATAGCGTCCGATGGAGTGAAATTTGCGTGTGTATTGTGTAATAAGACATTCTCACAGAAAGGCCATTTGAAAACGCACATAATGGCCTTACATACTGGCGAAAGGCCATTTGCATGCACTATATGTAATAAAAGATTCGTGCAAAAGAGTAATTTGCGAACTCATGTAAAATCAGCACACACAGATGAGTTACCCCACACTTGTAATATATGTAAAGGAGTTTGTAATGATGAAAGCCATTTGAGAGAGCATATGGGTATACATACTAACACATTTATCGAGGTAATTGAGTCTGGAGCTAAACCGTTTGCGTGTGGACAGTGTGGGAAAGCATTTACAGCGAAAGCCCATCTGAAATCGCATATAATGGCCATTCATACAGGTGAAAGGCCATTTGCATGTACTATGTGCGATAAAAGATACACACAAAAAAGCCATTTAAGACTACACGCCCGTCTTTCTCATGTTGTAGAGAAACCATTTGGTTGCGATGATTGTGAAATGAGATTCGACGACGCAGAATCATTGAGAAAGCATGGAAGAGCTCATGAAAAATCAACATTCATCTGCTCGACTTGCCACAAACTTTTTTTAACCGAAAACAGTTTCAATAAACATATTCTCGGTCATAGCGAGAAACGCAGTGTTAAAgtcaaagttaaagttaaaccaTTCTCGTGTGTGTTGTGCGGCAAGAAGTTCGGTTGGAAATCACATTTAAAAACCCATATAATGGCCATACATACCGGCGAAAGGCCATATTCATGTTCTTTATGTGATAAAACATTCGTTCAGCGTAGTAACTTAAGGTCGCATTCTAAAGTAGCTCATTCTATATCAAGCTCATTGAAATGTGATGTCTGCAAGAAAACTTTTCGAACCGAATACAATCTTAATATACACATGAAGAGTGTTCATTTGAATGAAGAGACAAAGAACGAGAAAGATGTTGATATTAAGAGGCCGTTCGCGTGTCTTATGTGTAGTAAAAGATTTGGGTGGAAATCACATCTTAAAACCCACATAATGGCCATACATACCGACGAAAGACCGTACGCGTGCCCTATGTGTGACAAAAAGTTCGTACAAAAGAGCTATTTAAGATACCACATGAAAAATGTCCATCCGGGAGAAAAAGCTACACAAACCATGACTAATATAGGACACGGACGGCCTTTTACATGTAAAATATGCTCCATTAAGTTCACAAACAAAACCAACTTTGAAAAACATAAGAGATTGCATACAGACACTCCTCCATACTTATGTATCAAATGCGATCAGAAATTCACCTCCAAAGATGATATGGACTCACATAATTTATGCTTGCATGCATTAGACCTAACGTTCGTCTGTGCTACATGTAATTCTAGATTTGAGGATGAGAAAGGCTTGAAGAAACATCATCTTGTACATTCTGTCAGCTACCCTCTATTCTGTGAAGTTTGCAATCGAACATATCCATCAAAATCCTCGTTAAAACGACACCAAGAAATCCACAGCGACGAGAAACCATATTCCTGTAAATTTTGCAAGAAAGCTTTTAAACAAGAGCGTGTATTgaaaaaacatttacaaattCATACGGAGGAGAAGAAATTCGGATGTGATACTTGCGGAAGGAAGTTTTATCAACGAGGTAACTTAATAGGTCACATGCGGATACATTCTGGTGAAAAACCATATGTATGTGATCGATGTGGTAACAGTTTCAACCAGAAAAGTCATTTAAGAACgcataatttatttatgcaTACAACGGACAAGCCTCATACTTGTAACGTATGTAATAAGAAGTTTAGACTTAAGAGTTGTCTGCGGAACCATATGATGGTTCACACGGGGGAACGGCCTCATCCATGCGATAGATGTGACAAGAAGTATTATAAGAAAAGCGAGTTGAAATCGCACGTTTTGAAAATGCACTCTTAA
Protein Sequence: MERKKPPGTPLRRTKEKMPLYIQVHYVGRPQAGTGIIYSTGILIVVFLSTDLPTVSEDNDSESDPLEAVKIEDIDESLSIPYQCDDCPRRFNSAKDLERHKITHKKIHKINTDSELINNDEEYLGDEKSVEELENEKCDAESLIASDGVKFACVLCNKTFSQKGHLKTHIMALHTGERPFACTICNKRFVQKSNLRTHVKSAHTDELPHTCNICKGVCNDESHLREHMGIHTNTFIEVIESGAKPFACGQCGKAFTAKAHLKSHIMAIHTGERPFACTMCDKRYTQKSHLRLHARLSHVVEKPFGCDDCEMRFDDAESLRKHGRAHEKSTFICSTCHKLFLTENSFNKHILGHSEKRSVKVKVKVKPFSCVLCGKKFGWKSHLKTHIMAIHTGERPYSCSLCDKTFVQRSNLRSHSKVAHSISSSLKCDVCKKTFRTEYNLNIHMKSVHLNEETKNEKDVDIKRPFACLMCSKRFGWKSHLKTHIMAIHTDERPYACPMCDKKFVQKSYLRYHMKNVHPGEKATQTMTNIGHGRPFTCKICSIKFTNKTNFEKHKRLHTDTPPYLCIKCDQKFTSKDDMDSHNLCLHALDLTFVCATCNSRFEDEKGLKKHHLVHSVSYPLFCEVCNRTYPSKSSLKRHQEIHSDEKPYSCKFCKKAFKQERVLKKHLQIHTEEKKFGCDTCGRKFYQRGNLIGHMRIHSGEKPYVCDRCGNSFNQKSHLRTHNLFMHTTDKPHTCNVCNKKFRLKSCLRNHMMVHTGERPHPCDRCDKKYYKKSELKSHVLKMHS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00267785;
90% Identity: iTF_00267785;
80% Identity: iTF_00267389;