Basic Information

Insect: Camptogramma bilineatum
Gene Symbol: -
Assembly: GCA_958496255.1
Location: OY292450.1:5080314-5085074[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 22 1.6e-06 0.00011 23.1 0.5 1 23 153 175 153 175 0.99

2 22 6.6e-06 0.00045 21.2 1.2 1 23 222 245 222 245 0.94

3 22 5e-07 3.4e-05 24.7 1.0 1 23 251 274 251 274 0.96

4 22 0.0037 0.25 12.5 3.1 1 23 280 302 280 302 0.96

5 22 2.3e-05 0.0016 19.4 0.2 1 23 317 340 317 340 0.94

6 22 1.7e-05 0.0012 19.9 2.8 1 23 346 369 346 369 0.95

7 22 0.00098 0.067 14.3 0.1 3 23 377 397 375 397 0.97

8 22 0.19 13 7.1 2.4 1 23 402 424 402 424 0.96

9 22 0.0008 0.055 14.6 0.8 1 23 439 462 439 462 0.95

10 22 1.5e-06 0.00011 23.2 1.0 1 23 468 491 468 491 0.96

11 22 5.7e-07 3.9e-05 24.5 1.1 2 23 498 520 497 520 0.96

12 22 0.0079 0.54 11.5 1.0 1 23 537 560 537 560 0.94

13 22 6.2e-07 4.2e-05 24.4 1.0 1 23 566 589 566 589 0.96

14 22 4.3e-05 0.0029 18.6 3.8 1 23 607 629 607 629 0.98

15 22 1.1 76 4.7 0.3 3 19 637 653 635 655 0.86

16 22 0.0083 0.56 11.4 1.3 1 23 664 686 664 686 0.97

17 22 1.2e-05 0.00079 20.4 0.7 3 23 694 714 692 714 0.96

18 22 0.00012 0.0078 17.3 2.6 1 23 720 742 720 742 0.98

19 22 1.3e-05 0.00091 20.2 0.3 3 23 750 770 748 770 0.98

20 22 0.00026 0.018 16.1 2.7 1 21 776 796 776 799 0.90

21 22 7.1e-05 0.0048 17.9 6.5 1 23 805 827 805 827 0.98

22 22 0.0007 0.048 14.8 3.0 1 23 833 856 833 856 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	22	1.6e-06	0.00011	23.1	0.5	1	23	153	175	153	175	0.99
2	22	6.6e-06	0.00045	21.2	1.2	1	23	222	245	222	245	0.94
3	22	5e-07	3.4e-05	24.7	1.0	1	23	251	274	251	274	0.96
4	22	0.0037	0.25	12.5	3.1	1	23	280	302	280	302	0.96
5	22	2.3e-05	0.0016	19.4	0.2	1	23	317	340	317	340	0.94
6	22	1.7e-05	0.0012	19.9	2.8	1	23	346	369	346	369	0.95
7	22	0.00098	0.067	14.3	0.1	3	23	377	397	375	397	0.97
8	22	0.19	13	7.1	2.4	1	23	402	424	402	424	0.96
9	22	0.0008	0.055	14.6	0.8	1	23	439	462	439	462	0.95
10	22	1.5e-06	0.00011	23.2	1.0	1	23	468	491	468	491	0.96
11	22	5.7e-07	3.9e-05	24.5	1.1	2	23	498	520	497	520	0.96
12	22	0.0079	0.54	11.5	1.0	1	23	537	560	537	560	0.94
13	22	6.2e-07	4.2e-05	24.4	1.0	1	23	566	589	566	589	0.96
14	22	4.3e-05	0.0029	18.6	3.8	1	23	607	629	607	629	0.98
15	22	1.1	76	4.7	0.3	3	19	637	653	635	655	0.86
16	22	0.0083	0.56	11.4	1.3	1	23	664	686	664	686	0.97
17	22	1.2e-05	0.00079	20.4	0.7	3	23	694	714	692	714	0.96
18	22	0.00012	0.0078	17.3	2.6	1	23	720	742	720	742	0.98
19	22	1.3e-05	0.00091	20.2	0.3	3	23	750	770	748	770	0.98
20	22	0.00026	0.018	16.1	2.7	1	21	776	796	776	799	0.90
21	22	7.1e-05	0.0048	17.9	6.5	1	23	805	827	805	827	0.98
22	22	0.0007	0.048	14.8	3.0	1	23	833	856	833	856	0.95

Sequence Information

Coding Sequence: ATGTATGATATCGGTAGCACTCGGTATCAAGAGATGCTTGAGAAACTGACGGGCGAAACGATAACTGCAGGAGAAGATGTGCCGAACACTCTGTGCTACCTCTGTCACTCGCAAGTGCAGAAGGTGTGGAGGTTCCTCGTCTCCTGTCAGAGCATGGAGAGGAACCTGGCGAGACTGCTGCAGTACGGAGTCAAGGTATCCAGCTTGTCAGTGACTCTGATAAATAAAGCGAGTGTTCACAATCTGATGCTGTCTTCCGTCAAACAAACCTTCGACTGTGTGGTGTTCTGTGTGAAGGAAGAAGATGTGGCGGTCAAAACAGAGGCTTTGGACAAACGAGACCGTCTCGATGAGGATGTTGAAGACCTACCTACAGTGTCTGAAGACAATGATTCAGAATCGGACCCCTTAGAAGCTGTCAAAATCGAAGATATCGATGAAAGTCTATCTATCCCTTACCAATGTGACGATTGTCCGAGAAGATTCAACTCAGCTAAAGATCTTGAAAGGCATAAAATCACTCATAAAAAGATACACAAAATTAACACCGATTCAGAATTGATAAATAATGATGAAGAGTATTTGGGTGATGAAAAGTCTGTAGAAGAGTTAGAGAATGAGAAATGTGACGCGGAGAGTCTGATAGCGTCCGATGGAGTGAAATTTGCGTGTGTATTGTGTAATAAGACATTCTCACAGAAAGGCCATTTGAAAACGCACATAATGGCCTTACATACTGGCGAAAGGCCATTTGCATGCACTATATGTAATAAAAGATTCGTGCAAAAGAGTAATTTGCGAACTCATGTAAAATCAGCACACACAGATGAGTTACCCCACACTTGTAATATATGTAAAGGAGTTTGTAATGATGAAAGCCATTTGAGAGAGCATATGGGTATACATACTAACACATTTATCGAGGTAATTGAGTCTGGAGCTAAACCGTTTGCGTGTGGACAGTGTGGGAAAGCATTTACAGCGAAAGCCCATCTGAAATCGCATATAATGGCCATTCATACAGGTGAAAGGCCATTTGCATGTACTATGTGCGATAAAAGATACACACAAAAAAGCCATTTAAGACTACACGCCCGTCTTTCTCATGTTGTAGAGAAACCATTTGGTTGCGATGATTGTGAAATGAGATTCGACGACGCAGAATCATTGAGAAAGCATGGAAGAGCTCATGAAAAATCAACATTCATCTGCTCGACTTGCCACAAACTTTTTTTAACCGAAAACAGTTTCAATAAACATATTCTCGGTCATAGCGAGAAACGCAGTGTTAAAgtcaaagttaaagttaaaccaTTCTCGTGTGTGTTGTGCGGCAAGAAGTTCGGTTGGAAATCACATTTAAAAACCCATATAATGGCCATACATACCGGCGAAAGGCCATATTCATGTTCTTTATGTGATAAAACATTCGTTCAGCGTAGTAACTTAAGGTCGCATTCTAAAGTAGCTCATTCTATATCAAGCTCATTGAAATGTGATGTCTGCAAGAAAACTTTTCGAACCGAATACAATCTTAATATACACATGAAGAGTGTTCATTTGAATGAAGAGACAAAGAACGAGAAAGATGTTGATATTAAGAGGCCGTTCGCGTGTCTTATGTGTAGTAAAAGATTTGGGTGGAAATCACATCTTAAAACCCACATAATGGCCATACATACCGACGAAAGACCGTACGCGTGCCCTATGTGTGACAAAAAGTTCGTACAAAAGAGCTATTTAAGATACCACATGAAAAATGTCCATCCGGGAGAAAAAGCTACACAAACCATGACTAATATAGGACACGGACGGCCTTTTACATGTAAAATATGCTCCATTAAGTTCACAAACAAAACCAACTTTGAAAAACATAAGAGATTGCATACAGACACTCCTCCATACTTATGTATCAAATGCGATCAGAAATTCACCTCCAAAGATGATATGGACTCACATAATTTATGCTTGCATGCATTAGACCTAACGTTCGTCTGTGCTACATGTAATTCTAGATTTGAGGATGAGAAAGGCTTGAAGAAACATCATCTTGTACATTCTGTCAGCTACCCTCTATTCTGTGAAGTTTGCAATCGAACATATCCATCAAAATCCTCGTTAAAACGACACCAAGAAATCCACAGCGACGAGAAACCATATTCCTGTAAATTTTGCAAGAAAGCTTTTAAACAAGAGCGTGTATTgaaaaaacatttacaaattCATACGGAGGAGAAGAAATTCGGATGTGATACTTGCGGAAGGAAGTTTTATCAACGAGGTAACTTAATAGGTCACATGCGGATACATTCTGGTGAAAAACCATATGTATGTGATCGATGTGGTAACAGTTTCAACCAGAAAAGTCATTTAAGAACgcataatttatttatgcaTACAACGGACAAGCCTCATACTTGTAACGTATGTAATAAGAAGTTTAGACTTAAGAGTTGTCTGCGGAACCATATGATGGTTCACACGGGGGAACGGCCTCATCCATGCGATAGATGTGACAAGAAGTATTATAAGAAAAGCGAGTTGAAATCGCACGTTTTGAAAATGCACTCTTAA
Protein Sequence: MYDIGSTRYQEMLEKLTGETITAGEDVPNTLCYLCHSQVQKVWRFLVSCQSMERNLARLLQYGVKVSSLSVTLINKASVHNLMLSSVKQTFDCVVFCVKEEDVAVKTEALDKRDRLDEDVEDLPTVSEDNDSESDPLEAVKIEDIDESLSIPYQCDDCPRRFNSAKDLERHKITHKKIHKINTDSELINNDEEYLGDEKSVEELENEKCDAESLIASDGVKFACVLCNKTFSQKGHLKTHIMALHTGERPFACTICNKRFVQKSNLRTHVKSAHTDELPHTCNICKGVCNDESHLREHMGIHTNTFIEVIESGAKPFACGQCGKAFTAKAHLKSHIMAIHTGERPFACTMCDKRYTQKSHLRLHARLSHVVEKPFGCDDCEMRFDDAESLRKHGRAHEKSTFICSTCHKLFLTENSFNKHILGHSEKRSVKVKVKVKPFSCVLCGKKFGWKSHLKTHIMAIHTGERPYSCSLCDKTFVQRSNLRSHSKVAHSISSSLKCDVCKKTFRTEYNLNIHMKSVHLNEETKNEKDVDIKRPFACLMCSKRFGWKSHLKTHIMAIHTDERPYACPMCDKKFVQKSYLRYHMKNVHPGEKATQTMTNIGHGRPFTCKICSIKFTNKTNFEKHKRLHTDTPPYLCIKCDQKFTSKDDMDSHNLCLHALDLTFVCATCNSRFEDEKGLKKHHLVHSVSYPLFCEVCNRTYPSKSSLKRHQEIHSDEKPYSCKFCKKAFKQERVLKKHLQIHTEEKKFGCDTCGRKFYQRGNLIGHMRIHSGEKPYVCDRCGNSFNQKSHLRTHNLFMHTTDKPHTCNVCNKKFRLKSCLRNHMMVHTGERPHPCDRCDKKYYKKSELKSHVLKMHS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00267785;
90% Identity: iTF_00267785;
80% Identity: iTF_00267785; iTF_00267388; iTF_00267787;