Cbil000569.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Camptogramma bilineatum
Gene Symbol
-
Assembly
GCA_958496255.1
Location
OY292450.1:5082714-5085074[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 22 1.4e-06 9.6e-05 23.3 0.5 1 23 82 104 82 104 0.99
2 22 5.9e-06 0.00041 21.3 1.2 1 23 151 174 151 174 0.94
3 22 4.5e-07 3.1e-05 24.8 1.0 1 23 180 203 180 203 0.96
4 22 0.0034 0.23 12.6 3.1 1 23 209 231 209 231 0.96
5 22 2.1e-05 0.0014 19.6 0.2 1 23 246 269 246 269 0.94
6 22 1.6e-05 0.0011 20.0 2.8 1 23 275 298 275 298 0.95
7 22 0.00089 0.06 14.5 0.1 3 23 306 326 304 326 0.97
8 22 0.17 12 7.2 2.4 1 23 331 353 331 353 0.96
9 22 0.00073 0.049 14.7 0.8 1 23 368 391 368 391 0.95
10 22 1.4e-06 9.5e-05 23.3 1.0 1 23 397 420 397 420 0.96
11 22 5.2e-07 3.5e-05 24.6 1.1 2 23 427 449 426 449 0.96
12 22 0.0071 0.49 11.6 1.0 1 23 466 489 466 489 0.94
13 22 5.6e-07 3.8e-05 24.5 1.0 1 23 495 518 495 518 0.96
14 22 3.9e-05 0.0026 18.7 3.8 1 23 536 558 536 558 0.98
15 22 1 69 4.9 0.3 3 19 566 582 564 584 0.86
16 22 0.0075 0.51 11.6 1.3 1 23 593 615 593 615 0.97
17 22 1e-05 0.00071 20.5 0.7 3 23 623 643 621 643 0.96
18 22 0.0001 0.0071 17.4 2.6 1 23 649 671 649 671 0.98
19 22 1.2e-05 0.00083 20.3 0.3 3 23 679 699 677 699 0.98
20 22 0.00024 0.016 16.3 2.7 1 21 705 725 705 728 0.90
21 22 6.4e-05 0.0044 18.1 6.5 1 23 734 756 734 756 0.98
22 22 0.00064 0.043 14.9 3.0 1 23 762 785 762 785 0.95

Sequence Information

Coding Sequence
ATGGAAAGAAAAAAACCCCCCGGAACACCCTTGAGACGGACCAAGGAAAAAATGCCCCTGTACATCCAGGTGCATTATGTAGGTAGACCACAGGCGGGGACTGGTATTATTTATTCTACTGGTATATTAATAGTGGTTTTTTTATCCACAGACCTACCTACAGTGTCTGAAGACAATGATTCAGAATCGGACCCCTTAGAAGCTGTCAAAATCGAAGATATCGATGAAAGTCTATCTATCCCTTACCAATGTGACGATTGTCCGAGAAGATTCAACTCAGCTAAAGATCTTGAAAGGCATAAAATCACTCATAAAAAGATACACAAAATTAACACCGATTCAGAATTGATAAATAATGATGAAGAGTATTTGGGTGATGAAAAGTCTGTAGAAGAGTTAGAGAATGAGAAATGTGACGCGGAGAGTCTGATAGCGTCCGATGGAGTGAAATTTGCGTGTGTATTGTGTAATAAGACATTCTCACAGAAAGGCCATTTGAAAACGCACATAATGGCCTTACATACTGGCGAAAGGCCATTTGCATGCACTATATGTAATAAAAGATTCGTGCAAAAGAGTAATTTGCGAACTCATGTAAAATCAGCACACACAGATGAGTTACCCCACACTTGTAATATATGTAAAGGAGTTTGTAATGATGAAAGCCATTTGAGAGAGCATATGGGTATACATACTAACACATTTATCGAGGTAATTGAGTCTGGAGCTAAACCGTTTGCGTGTGGACAGTGTGGGAAAGCATTTACAGCGAAAGCCCATCTGAAATCGCATATAATGGCCATTCATACAGGTGAAAGGCCATTTGCATGTACTATGTGCGATAAAAGATACACACAAAAAAGCCATTTAAGACTACACGCCCGTCTTTCTCATGTTGTAGAGAAACCATTTGGTTGCGATGATTGTGAAATGAGATTCGACGACGCAGAATCATTGAGAAAGCATGGAAGAGCTCATGAAAAATCAACATTCATCTGCTCGACTTGCCACAAACTTTTTTTAACCGAAAACAGTTTCAATAAACATATTCTCGGTCATAGCGAGAAACGCAGTGTTAAAgtcaaagttaaagttaaaccaTTCTCGTGTGTGTTGTGCGGCAAGAAGTTCGGTTGGAAATCACATTTAAAAACCCATATAATGGCCATACATACCGGCGAAAGGCCATATTCATGTTCTTTATGTGATAAAACATTCGTTCAGCGTAGTAACTTAAGGTCGCATTCTAAAGTAGCTCATTCTATATCAAGCTCATTGAAATGTGATGTCTGCAAGAAAACTTTTCGAACCGAATACAATCTTAATATACACATGAAGAGTGTTCATTTGAATGAAGAGACAAAGAACGAGAAAGATGTTGATATTAAGAGGCCGTTCGCGTGTCTTATGTGTAGTAAAAGATTTGGGTGGAAATCACATCTTAAAACCCACATAATGGCCATACATACCGACGAAAGACCGTACGCGTGCCCTATGTGTGACAAAAAGTTCGTACAAAAGAGCTATTTAAGATACCACATGAAAAATGTCCATCCGGGAGAAAAAGCTACACAAACCATGACTAATATAGGACACGGACGGCCTTTTACATGTAAAATATGCTCCATTAAGTTCACAAACAAAACCAACTTTGAAAAACATAAGAGATTGCATACAGACACTCCTCCATACTTATGTATCAAATGCGATCAGAAATTCACCTCCAAAGATGATATGGACTCACATAATTTATGCTTGCATGCATTAGACCTAACGTTCGTCTGTGCTACATGTAATTCTAGATTTGAGGATGAGAAAGGCTTGAAGAAACATCATCTTGTACATTCTGTCAGCTACCCTCTATTCTGTGAAGTTTGCAATCGAACATATCCATCAAAATCCTCGTTAAAACGACACCAAGAAATCCACAGCGACGAGAAACCATATTCCTGTAAATTTTGCAAGAAAGCTTTTAAACAAGAGCGTGTATTgaaaaaacatttacaaattCATACGGAGGAGAAGAAATTCGGATGTGATACTTGCGGAAGGAAGTTTTATCAACGAGGTAACTTAATAGGTCACATGCGGATACATTCTGGTGAAAAACCATATGTATGTGATCGATGTGGTAACAGTTTCAACCAGAAAAGTCATTTAAGAACgcataatttatttatgcaTACAACGGACAAGCCTCATACTTGTAACGTATGTAATAAGAAGTTTAGACTTAAGAGTTGTCTGCGGAACCATATGATGGTTCACACGGGGGAACGGCCTCATCCATGCGATAGATGTGACAAGAAGTATTATAAGAAAAGCGAGTTGAAATCGCACGTTTTGAAAATGCACTCTTAA
Protein Sequence
MERKKPPGTPLRRTKEKMPLYIQVHYVGRPQAGTGIIYSTGILIVVFLSTDLPTVSEDNDSESDPLEAVKIEDIDESLSIPYQCDDCPRRFNSAKDLERHKITHKKIHKINTDSELINNDEEYLGDEKSVEELENEKCDAESLIASDGVKFACVLCNKTFSQKGHLKTHIMALHTGERPFACTICNKRFVQKSNLRTHVKSAHTDELPHTCNICKGVCNDESHLREHMGIHTNTFIEVIESGAKPFACGQCGKAFTAKAHLKSHIMAIHTGERPFACTMCDKRYTQKSHLRLHARLSHVVEKPFGCDDCEMRFDDAESLRKHGRAHEKSTFICSTCHKLFLTENSFNKHILGHSEKRSVKVKVKVKPFSCVLCGKKFGWKSHLKTHIMAIHTGERPYSCSLCDKTFVQRSNLRSHSKVAHSISSSLKCDVCKKTFRTEYNLNIHMKSVHLNEETKNEKDVDIKRPFACLMCSKRFGWKSHLKTHIMAIHTDERPYACPMCDKKFVQKSYLRYHMKNVHPGEKATQTMTNIGHGRPFTCKICSIKFTNKTNFEKHKRLHTDTPPYLCIKCDQKFTSKDDMDSHNLCLHALDLTFVCATCNSRFEDEKGLKKHHLVHSVSYPLFCEVCNRTYPSKSSLKRHQEIHSDEKPYSCKFCKKAFKQERVLKKHLQIHTEEKKFGCDTCGRKFYQRGNLIGHMRIHSGEKPYVCDRCGNSFNQKSHLRTHNLFMHTTDKPHTCNVCNKKFRLKSCLRNHMMVHTGERPHPCDRCDKKYYKKSELKSHVLKMHS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00267785;
90% Identity
iTF_00267785;
80% Identity
iTF_00267389;