Cvom014355.1
Basic Information
- Insect
- Calliphora vomitoria
- Gene Symbol
- Rel
- Assembly
- GCA_942486075.2
- Location
- CALNXM020000421.1:389430-393252[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7e-52 2.4e-48 164.5 1.2 1 168 152 330 152 331 0.92
Sequence Information
- Coding Sequence
- ATGGAAAATATGATGCCATATTTAAGTTCTACGACAAATAATGAAAAGGATTTTATCAATATGGATACACTGGAACGTATACGAAGTGTCAGCGAATCTTCTATGGGTGGCACTAGTGGCTATAACAGCACAACATCTCCAGGACCAGAAAACTCTCCTGTTTCAAGTCGTTATTCTCCGGTACAATCACCAGACTCTGTTCTACAAACTGAATTTTCCCAATTAGTAATACCGCCACTATCTTATCAACAGCAAAACACATCGCAATACGTACAATTGCAGAATGTACACATGAATGTCAACAATCAACCACTATTGTATCAACAGAACCAAAATATGAATTTCTCACCTCATTTAAACTTTGGAAATCCTATAACTTATCAACAATTTCAGCAGCCAGCCGCAGCAACAACAATGTCTTATACAGATGTTAAATATGAATATGAGGCATCCTTACGTATTACCGAACAACCGGTAGAAAAATTCCGTTTTCGTTACAAGTCCGAAATGCACGGCACACATGGCTCCCTAAATGGTACCAACTCTCAAAGAAATACAAAAACCTTCCCCGAAGTTGAGCTGGTCGGTTATAAAGGACCAGCCATCATACGGTGTAGTTTGTTTCAAACTAACCTTGAAAGTCCACACTCGCATCAGTTGGTGGTGCGCAAGGATGACCACGATATATGTGACCCACACGAATTAAAGGTTTCCCAGGAAGTTGGTTATTTTGCAGAATTTAAAAATATGGGTATTATACATACCGCCAAGAAATTCATTGTAGAGGAATTGTTAAAAAAGAAACGTAAGCGTTTGGGTCGTGATGTTTTGACAACAAAGGAAGATCAGGAGCTGCACAAGCAAACAGAAAAAGAAGCCAAGGATATGAATTTAAATCAGGTACGTCTATGTTTTGAAGCATTTCGTATTGAAGAAAACAAATCGTACACACCTATAGCTGCGCCAGTTTATTCAAATCCCATTAATAATCGTAAGTCAGCACAAACCGGAGAATTACGTATTACACGCTTGAGCATAGCAACAGGCAATGTTGCAGGTGGCGACGATCTAATATTGTTAGTGGAAAAAGTTAGCAAAAAGAACATTAAAGTACGATTCTATGAAATGGTTGAAGATGAACAAGTGTGGGAGGCTTTTGCTACTTTTCGCGAATCCGATGTCCATCATCAATATGCGATTGTTTGTCGGACACCAGCGTATAAAGACAAGGATATCGACAAAGCTGTTGAGGTATTTATTGAGCTTGTAAGGCCATCGGACGATGAACGTAGTTATCCGCCAGTATCGTTTCGTTATAAGCCAAACTATGCTGTAATATCGCGTAAACGTAGACGAACATGTTCATCTTTAAATAGCGGTTCTTGTAGCAATTCTGGCTCACTAAGTTCAGGAGAAATACCCAAAACTATTCAAGAACAACAGAAATTACTTAATGCATCAGATGAACTTAAACAATTATTCAACTCTGAATTAATTAAATCCGATATATCGATAGATTCGGGCTTATTGGCTTATTTAGAGGATCCAAAAGTGAACGATTTCGACCCATTGCTATCGAGTGGTAATCGTATCGAAAAAGATGGAGTTTGTAGCGCCAGCGAAGCTAAGAACCCCTATCACTACAAGAAATCGATGATTAGCAAAAAACAAATGGATTTGGCTAGACAAGGTGTACAACAGCATCAGCAACCACTTAATATATATTTACAGCGTATTTTAAATATACATCATGATACCATTAGGTCTTCAACGCCACCAAATCCCACAAAACGCGACAGTGCTGCTGAGCAAATAACCAAAATCATAAATGAACATGCTGAAAAATATGGAGAGTCGCTGATACACGAAATTGTACTAGGAGATAACAATAAATTTGCCATACCGATTTTTAGGGTCTTGGAGTATTTCAAATTAAATGAACTTTTAAATACCATAACAAACAAAAGAACACAGACGGCCTTACACTATGCCTGTCTGTACAGTCAGCCAAACTACATACGGCCGCTTTTAAAATTGGGCTGTAACCCCAACATCCAAGACTCTGATGGTAATACAGCACTGCATATTGCAGTGCGTGAAAAGGACTTAAAATGCTTGGAAAGTTTCATAAATTCGGAAATGTCTTTGAATCTAAACCATTTAAACGACGATGGTTTTACACCCTTACATTTGGCCATACGCGATAACAATTACGAAATTGTGGCCAAACTATTGAAATTTGATGCGAATACAGTGTATACGACCTGCAGTAAAGATGGCAGTAACGCTTTACATATGGCTGTACAACAGCAAAATCTAAAATTGGTTAATTTAATATTGGACAATAGTCCATTAATTTCTGCAATATTATATGCCAACAACAGGGCCGGTTATACACCATTGGATTTGGCCAAGCAACTGGTAACGAGTGATGAACAGGCCAAACAAATACTAAGCAAACTTCTAACATTCTACAACAAATATCCTTCTCATGATAAAACAGAAAAAATGGACGTGAACACATGTAGCGGCGATGTTGAGGTTGATGATGATGAAGAACATAAACTGGTCATAAAAGAAGAAGAAAATTCATGTTCATCTACCGAAGACGACGAGGAGGATAACAACAGTAATTTAAGTGAGTCAAATACAAAAGCAACAGCGAAAGTAGCGCCGACTACACAAACGAAACTCATAAAAGAATCAGACATTAAACAAGAACTTACCGACGACCATGCTACTACCACCACTACTCTTAATGCAACGGATCTGGAGGCGGCGTTAAATAATAAAGAGATTTTCTCACAACTTAGCGTTAAGCTAAATGAGAATGAAAATTGGAAAAAATTAGCCACAGATATGGAAATGCCTCATTTTTATTTATCGAACGCTCAAGCTTTCCTCAACTCGTTGAAACGCAATTTAAAAAGTGTAAATTGTACACAATTTGCCTTAGCACTGAGTAATATTGACAAAAGTTTATATAATTTATTATTAAATAACTAA
- Protein Sequence
- MENMMPYLSSTTNNEKDFINMDTLERIRSVSESSMGGTSGYNSTTSPGPENSPVSSRYSPVQSPDSVLQTEFSQLVIPPLSYQQQNTSQYVQLQNVHMNVNNQPLLYQQNQNMNFSPHLNFGNPITYQQFQQPAAATTMSYTDVKYEYEASLRITEQPVEKFRFRYKSEMHGTHGSLNGTNSQRNTKTFPEVELVGYKGPAIIRCSLFQTNLESPHSHQLVVRKDDHDICDPHELKVSQEVGYFAEFKNMGIIHTAKKFIVEELLKKKRKRLGRDVLTTKEDQELHKQTEKEAKDMNLNQVRLCFEAFRIEENKSYTPIAAPVYSNPINNRKSAQTGELRITRLSIATGNVAGGDDLILLVEKVSKKNIKVRFYEMVEDEQVWEAFATFRESDVHHQYAIVCRTPAYKDKDIDKAVEVFIELVRPSDDERSYPPVSFRYKPNYAVISRKRRRTCSSLNSGSCSNSGSLSSGEIPKTIQEQQKLLNASDELKQLFNSELIKSDISIDSGLLAYLEDPKVNDFDPLLSSGNRIEKDGVCSASEAKNPYHYKKSMISKKQMDLARQGVQQHQQPLNIYLQRILNIHHDTIRSSTPPNPTKRDSAAEQITKIINEHAEKYGESLIHEIVLGDNNKFAIPIFRVLEYFKLNELLNTITNKRTQTALHYACLYSQPNYIRPLLKLGCNPNIQDSDGNTALHIAVREKDLKCLESFINSEMSLNLNHLNDDGFTPLHLAIRDNNYEIVAKLLKFDANTVYTTCSKDGSNALHMAVQQQNLKLVNLILDNSPLISAILYANNRAGYTPLDLAKQLVTSDEQAKQILSKLLTFYNKYPSHDKTEKMDVNTCSGDVEVDDDEEHKLVIKEEENSCSSTEDDEEDNNSNLSESNTKATAKVAPTTQTKLIKESDIKQELTDDHATTTTTLNATDLEAALNNKEIFSQLSVKLNENENWKKLATDMEMPHFYLSNAQAFLNSLKRNLKSVNCTQFALALSNIDKSLYNLLLNN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00921218;
- 90% Identity
- iTF_00258637;
- 80% Identity
- -