Cvic001561.1
Basic Information
- Insect
- Calliphora vicina
- Gene Symbol
- Rel
- Assembly
- GCA_958450345.1
- Location
- OY288232.1:25457966-25461352[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.1e-51 2.1e-47 162.2 1.0 1 168 153 331 153 332 0.92 2 2 1.3 6.8e+03 -2.2 0.2 68 111 855 906 846 953 0.46
Sequence Information
- Coding Sequence
- ATGGAAAATATGATGCCATATTTAAGTTCTACGACAAATAATGAAAAGGATTTTATCAATATGGATACACTGGAACGTATACGAAGTGTCAGCGAATCTTCTATGGGTGGCACTAGTGGCTATAATAGCACAACATCGCCAGGACCAGAAAACTCTCCTGTTTCAAGTCGCTATTCTCCGGTACAATCCCCAGACTCTGTTCTACAAACTGAATTTTCCCAATTAGTGATACCGCCACTATCTTATCAACAGCAAAACACATCGCAATACGTACAATTGCAGAATGTGCACATGAATGTAAACAACAATCAGCCACTATTGTATCAACAGAACCAAAATATGAATTTCTCACCTCATTTAAACTTTGGAAATCCTATAAATTATCAACAATTTCAGCAGCCAACCGCACCATCAACAATGTCATATACAGAtgttaaatatgaatatgagGCATCCTTACGTATTACCGAACAACCGGTAGAAAAATTCCGTTTTCGTTACAAGTCCGAAATGCACGGCACACATGGCTCCCTAAATGGTACCAACTctcaaagaaatacaaaaacctTCCCCGAAGTCGAGCTGGTCGGTTATAAAGGACCAGCCATCATACGCTGTAGTTTGTTTCAAACTAACCTTGAAAGTCCACACTCACATCAGTTGGTTGTACGCAAGGATGACCACGATATATGCGATCCACACGAATTGAAGGTTTCCCTAGAAGTTGGTTATTTTgccgaatttaaaaatatgggtaTTATACATACCGCCAAGAAATTCATTGTAGAggaattgttaaaaaagaaaCGTAAGCGTTTGGGTCGTGAAGTTTTAACAACAAAAGAAGATCAGGAGCTGCACAAGCAAACAGAAAAAGAAGCCAAGGATATGAATTTAAATCAGGTACGTCTATGTTTTGAAGCATTTCGTGTTGAAGAAAACAAATCGTACACGCCTATAGCTGCGCCAGTTTATTCAAATCCCATTAATAATCGTAAGTCTGCACAAACCGGAGAATTGCGTATTACACGCTTGAGCATAGCAACAGGCAATGTTGCAGGTGGCGACGATCTAATATTATTGGTGGAAAAGGTTAGCAAAAAGAACATTAAAGTACGATTCTATGAAATGGTTGAAGATGAGCAAGTATGGGAGGCTTTTGCTACTTTTCGCGAATCCGATGTCCATCATCAATATGCAATTGTCTGTCGGACACCATCGTATAAAGACAAGGATATCGACAAAGCTGTTGAGGTGTTTATTGAGCTTGTAAGGCCATCGGACGATGAACGCAGTTATCCGCCAGTATCGTTTCGTTATAAGCCAAACTATGCTGTAATATCGCGTAAACGTAGACGAACATGTTCATCTTTAAATAGCGGTTCTTGTAGCAATTCTGGCTCACTAAGTTCAGGAGAAATACCTAAAACTATTCAAGAACAACAGAAATTACTTAATGCATCAGATGAACTTAAACAGTTATTCAACTCGGAGTTGATTAAATCCGATATATCAATAGATTCGGGCTTATTGGCTTATTTAGAGGATCCAAAAGTGAACGATTTCGACCCATTGCTATCGAGTGGTAATCGTATCGAAAAAGATGGAGTTTGTAGCGCCAGCGAAGCTAAGAACCCCTATCACTACAAGAAATCGATGATTAGCAAAAAACAAATGGATTTGGCTAGACAAGGTGTACAACAGCATCAGCAACCacttaatttatatttacagcgtattttaaatatacatcATGATACTATTAGGTCTTCAACACCACCAAATCCCACAAAACGCGACAGTGCTGCTGAGCAAATAACCAAAATCATAAATGAACATGCTGAAAAATATGGAGATTCGCTGATACACGAAATTGTACTGGGAGATAACAATAAATTTGCCATACCGATTTTTAGGGTTTTGGagtatttcaaattaaatgaacTTTTAAATACCATAACAAACAAAAGAACACAGACGGCCTTACACTATACCTGTCTGTACAGTCAGCCAAACTATATACGGCCGCTTTTAAAATTGGGCTGTAACCCCAACATCCAAGATTCTGATGGTAATACAGCACTGCATCTTGCAGTGCGTGAAAAGGACTTGAAATGCTTGGAAAGTTTCATAAATTCGGAAATGTCTTTGAATCTAAACCATTTAAACGATGATGGTTTTACACCCTTACATTTGGCCATACGCGATAACAATTACGAAATTGTGGCCAAACTATTGAAATTTGATGCAAATACAGTGACTACGACCTGCAGTAAAGATGGCAGTACCGCTTTACATATGGCcgtacaacaacaaaatcttaAATTGGTTAATTTAATATTGGACAATAGCCCattaatttctgcaatattaTATGCCAACAACAGGGCTGGCTATACGCCTTTAGATTTGGCCAAGCAACTGGTAACGAGTGATGAACAGGCGAAACAAATACTAAGCAAACTTCTAACATTCTACAACAAATATCCTTCTCAcgataaaacagaaaaaatggaCGTGAACACATGTAGCGGCGATGTTGTGGATGACGAAGATGAAGAACATAAATTGGTaataaaagaagaagaaaattcATGTTCATCTACCGAAGACGACGAGGAGGATAATAACAGTAATTTAAGTGaatcaaatacaaaaacaacatccaAAGTAGGGCCGATTACACAAACGAAACTCATAAAAGAATCAGACATTAAACAAGAACTTACCGACGACCAGGCTACTACCACCACTACTCTCAATGCAACGGATCTGGAGGCggctttaaataataaacagatTTTCTCACAACTTAGCGTTAAGTTAAATGAGaatgaaaattggaaaaaactagCCACAGATATGGAAATGCCTCATTTTTATTTAACGAATGCACAAGCTTTCCTCAATTCATTGAAACGCAATTTAAAAAGCGTAAATTGTACACAATTTGCCTTAGCACTGGTTACTATTGACAAaagtttatataatttattattaaataaataa
- Protein Sequence
- MENMMPYLSSTTNNEKDFINMDTLERIRSVSESSMGGTSGYNSTTSPGPENSPVSSRYSPVQSPDSVLQTEFSQLVIPPLSYQQQNTSQYVQLQNVHMNVNNNQPLLYQQNQNMNFSPHLNFGNPINYQQFQQPTAPSTMSYTDVKYEYEASLRITEQPVEKFRFRYKSEMHGTHGSLNGTNSQRNTKTFPEVELVGYKGPAIIRCSLFQTNLESPHSHQLVVRKDDHDICDPHELKVSLEVGYFAEFKNMGIIHTAKKFIVEELLKKKRKRLGREVLTTKEDQELHKQTEKEAKDMNLNQVRLCFEAFRVEENKSYTPIAAPVYSNPINNRKSAQTGELRITRLSIATGNVAGGDDLILLVEKVSKKNIKVRFYEMVEDEQVWEAFATFRESDVHHQYAIVCRTPSYKDKDIDKAVEVFIELVRPSDDERSYPPVSFRYKPNYAVISRKRRRTCSSLNSGSCSNSGSLSSGEIPKTIQEQQKLLNASDELKQLFNSELIKSDISIDSGLLAYLEDPKVNDFDPLLSSGNRIEKDGVCSASEAKNPYHYKKSMISKKQMDLARQGVQQHQQPLNLYLQRILNIHHDTIRSSTPPNPTKRDSAAEQITKIINEHAEKYGDSLIHEIVLGDNNKFAIPIFRVLEYFKLNELLNTITNKRTQTALHYTCLYSQPNYIRPLLKLGCNPNIQDSDGNTALHLAVREKDLKCLESFINSEMSLNLNHLNDDGFTPLHLAIRDNNYEIVAKLLKFDANTVTTTCSKDGSTALHMAVQQQNLKLVNLILDNSPLISAILYANNRAGYTPLDLAKQLVTSDEQAKQILSKLLTFYNKYPSHDKTEKMDVNTCSGDVVDDEDEEHKLVIKEEENSCSSTEDDEEDNNSNLSESNTKTTSKVGPITQTKLIKESDIKQELTDDQATTTTTLNATDLEAALNNKQIFSQLSVKLNENENWKKLATDMEMPHFYLTNAQAFLNSLKRNLKSVNCTQFALALVTIDKSLYNLLLNK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00921218;
- 90% Identity
- iTF_00259547;
- 80% Identity
- -