Bpyr006487.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Bombus pyrosoma
Gene Symbol
BAZ2B
Assembly
GCA_014825855.1
Location
CM026125.1:15730599-15742434[+]

Transcription Factor Domain

TF Family
MBD
Domain
MBD domain
PFAM
PF01429
TF Group
Unclassified Structure
Description
The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 9e-23 4.4e-19 68.0 0.0 4 76 550 622 547 623 0.94

Sequence Information

Coding Sequence
ATGTATACAGAAGCGTATTGGCCTCGAGGTGATAGTGCAGCTTCGTCGTTATTCGGAGGAATGCCGGGCGGGTATGGATTGGGGGCCCATCATTTACCATCGGCTTATGCCATCTTGGGCCGTGGTGGCTCTGCTCCCGGATTTGGGGGCCACACACCAGCTTCCGCTCCACCACCACCTCCATACTCCCATAGCAGCCTTGGTACTCTGAGTGTAGCTGCCAGTCAGGCTGCGAGTTTAGGTATCAATCCTGCTAGTGCAGCATGGTGGACAATGGCCTCACATTTAGCTGCACAGGACTACCTCGCGAGGTTACAAGGAGCGGCAGGGCTACCCGGATTTCCGCCTGGTGCCGAGAGCCTTCTGCCACCCTATCCTGCCTCTCTACTTAATCCCCCGTCCCTATCGTCCCACAAGTCTAGTAAGTCTAAGTCAAGCAAGAGTCACAAGACGCCAGCGAGCAGTAGCAGCTCGACGACGCCGAGTATGACGGGCAGCAGTTTACCGGTTTCGACTCAAGCACCAGTCACGTCGTCTCATCACAGCACGTCGACCAGCAGCACGCCGAATTCGCAAACGAACGTTGTCAGCGATCCTAGCAGTATATTAGGAGGTGTACGCCTGCCACCTGATACGGAGATTATCAAGTACACGTCGAGCATAGTCGGTCCAAAGGTTCCTGGCACAACGAACCGCGGGAGGAAGAAGACTATATCCTTAGACACGCCGAGTGTGAGTGTGCATCCACCGCCGGTACCTGCTCTGAGTGCTCATCAGACAAACACCACGACATCTTCGTTAATGATGGAACCGAGAAAATATAATCGCACGGGGACCGAGTCGAACGATTATAGGGAGTCGGTGGATCGCGTGGAGGTGATCAAACTGCCGGCACATTCGACAAACGGCTCTGCCTTACCAGCGCCATCGTCGTATACAACAACCACTAACGCGAGCAATTCGAATGATTCGGACGCGCCGCTGAACCTCTCGCTGAAACCCTCGACGACGAGCAGTAGCTCGCCGATTTCAGGCAGTCAGCCGCTCAGTCAGCTCAGTAATTTAAGTCAGTCGTTACTCGCCTCCGATCGAACTTCGAGAAGAAAGCCAGGACCGAAGCCTCGAAGGGTACCACAGAATTCCGTACCGGTGCCAGCATCGCCGAGTCCATCCTTGGCGCAGCTGTTCGCTGCAGCGGATTCACCTCAACGACCGAGCAGCGGTAGCGAGGAGAGCGAGAGCGCCAGCACGACCCACCACAAAGATGGTCGACCGAGAAACCTGGGCCGTGGAGTATCTAAACCGAAGAAGAACACGGTGGCCTCGCTGCTAGCTCAGAGTAGAGCTTTGGGAATCAAACCGACGCCCACTTTGGATCCTAGTGTGCCATTGTCTCATCAGGTCTCGTTACTTAGGTCGAATATTCTGGCTGCTCAATTGCATGCCACTGCCACTGGCCAGACTGATGACAAGAATCAGCGGTCTTTACAGGAGAAGATGAAGAACAAGGTGCTCGAGGTATCCGGTGAGGAGAGTAACATGGACGTGACGAGCGAGAGCGGCAGCAACACCGACGTTGTGACGGACACCGACGACGACAACGCGGATGGCGTGTCTAGCGCGAAGAGAAGAAAAGTGAAGCCTAGCGAGAGGGATCTCCAGGTGCCGCTTGAGCGTGGCTGGAAGCGAGAGACCGTCATCAAGGGATTAGGAAAGTCAGGGGTGATAAAGGGTGACGTGTCTTATTATAGTCCTTGTGGAAAGACGTTCAGGAGTAGTCCGGATTTGGCGAAGTTTTTGGAGCAACAGAATCCACCCGACTTAACGACGGCAAACTTTTCGTTCTCGTCTCGTCCGCTTGTGGGTGAATTCCTGCAGCCAACGATGGGTCTCGCGGAGGCGGAATTCGTTAGGTTGGGCGCTCAGGAAGTTGCGAGAAGATTGGAGGAGTTGAGAGCCGCAGGTGGTTTCAGGGACGTGCGAACAAACAATCAGTACGAGAGGGAGAAACTGGCATATGCAAAAAAGCTAGCGAAAGAGGAGGCGCAACGACACAAGGAGCAGGCTAGGCTCATCAAGGAGCAAGAGAAAACGGAAAGGCAGGAGGCAGTGAGGCGAGAACGGGAGATTCGAAATCAACAGCTGCTCGAGGGTCGAAAGCGGCTAGCGTTCACGATCAAGCAGAAAATGAAGATCATCCAAGAGATCGAACGCGGTAAGAGCAAGAGCGACGTGGCGCGCGAGCTGGGTCTGGCTAGCAGCACGGTGGCCACCATTTGGAAGAATCGGGAAAGCATCGCGGAGAGCTGGAGGAACCGCGACATGATGCAGCACTCTGATGTCGAGGACTCGGTCGCAAAAAAGTCCGGCCTGTCCTCATCATCGTCGAATTTGGCATCCGTCACGTCGTTGGTGACGAACAATACGGTGTTAAACACCGTCAACACCAACAACAGTAGCACCACCGGCACCACGTTGCCCACCGCCATCGTGGTGGCACCGCCACAGGTGCAGGTGGTGCCGCCGCCACCACCACCGCCTCTCCCATTGCCGACCACCTCTGCCACGGTCGTCCCGTCGACGTCGCAACCGACGCAGCTCTCCACACCGCCAATCTCCAGCACCATGTCCACAGGCACCACCACCACCACCAACGCCAGCATGGACAATACTCAGCAGGCCCAGACCCAGACGCAAAGTCAGGAGCTTCTGGAGGTAAGATGTCGTATGACGCCTCCCGACCCCTCACCGAAATACCCTCAGATAACTCGAAAAAATCGAGTTACCAACCCCAAAATTCTCTCCGCCCTCGATCATCCCTTTCAGGGGAACCTTCCATCGCGAGTCGCGTCCTCGAGGTTTTTGGTCATATTCAGATGCAATTCACGATGGAATTGTGGTTGGTGTGGAATCCATAAGCAGTGA
Protein Sequence
MYTEAYWPRGDSAASSLFGGMPGGYGLGAHHLPSAYAILGRGGSAPGFGGHTPASAPPPPPYSHSSLGTLSVAASQAASLGINPASAAWWTMASHLAAQDYLARLQGAAGLPGFPPGAESLLPPYPASLLNPPSLSSHKSSKSKSSKSHKTPASSSSSTTPSMTGSSLPVSTQAPVTSSHHSTSTSSTPNSQTNVVSDPSSILGGVRLPPDTEIIKYTSSIVGPKVPGTTNRGRKKTISLDTPSVSVHPPPVPALSAHQTNTTTSSLMMEPRKYNRTGTESNDYRESVDRVEVIKLPAHSTNGSALPAPSSYTTTTNASNSNDSDAPLNLSLKPSTTSSSSPISGSQPLSQLSNLSQSLLASDRTSRRKPGPKPRRVPQNSVPVPASPSPSLAQLFAAADSPQRPSSGSEESESASTTHHKDGRPRNLGRGVSKPKKNTVASLLAQSRALGIKPTPTLDPSVPLSHQVSLLRSNILAAQLHATATGQTDDKNQRSLQEKMKNKVLEVSGEESNMDVTSESGSNTDVVTDTDDDNADGVSSAKRRKVKPSERDLQVPLERGWKRETVIKGLGKSGVIKGDVSYYSPCGKTFRSSPDLAKFLEQQNPPDLTTANFSFSSRPLVGEFLQPTMGLAEAEFVRLGAQEVARRLEELRAAGGFRDVRTNNQYEREKLAYAKKLAKEEAQRHKEQARLIKEQEKTERQEAVRREREIRNQQLLEGRKRLAFTIKQKMKIIQEIERGKSKSDVARELGLASSTVATIWKNRESIAESWRNRDMMQHSDVEDSVAKKSGLSSSSSNLASVTSLVTNNTVLNTVNTNNSSTTGTTLPTAIVVAPPQVQVVPPPPPPPLPLPTTSATVVPSTSQPTQLSTPPISSTMSTGTTTTTNASMDNTQQAQTQTQSQELLEVRCRMTPPDPSPKYPQITRKNRVTNPKILSALDHPFQGNLPSRVASSRFLVIFRCNSRWNCGWCGIHKQ