Bhae009440.1
Basic Information
- Insect
- Bombus haemorrhoidalis
- Gene Symbol
- retn
- Assembly
- GCA_014825975.1
- Location
- CM026162.1:11917859-12052549[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.1 1.1e+04 -3.1 0.1 67 82 205 221 193 222 0.69 2 2 5.5e-26 1.5e-22 79.9 0.0 2 89 228 313 227 313 0.96
Sequence Information
- Coding Sequence
- ATGGAAATGAGCGACGAGTATCAGGACATGGGAAACCCCGGCGGAGGGGTAGCGATGGTCAACATACCCATTACCCATCACCAACATTCGCCTGATAGTCCATTGTCGCATCAGGAGGAGGATTTGTCGGATCCAGACCTTCAGGACGAAGAGAGCGGCGAAGAGTTACCTCAGCAACCACTTCAGGGTAACACGCACTCATCGTCGGATAATGCATCCGCACAGGCTAGTACACCTACTCCATTAACACACTTGAGCAGCCTGATGGGTGCACACCATCCGCACTTTCTGACGAAGCTGAAAATGGAGGCAGCCGATGTGGATGCATTAACCAACAAAAGCGGGCTAGAAGCGTTGCAAGTTGCTATGAGTGGAGCCGGATTCAATTTGCCATTTACGTTTCCACCACCTGCAGCGTTCCTAACGCCGCAGCACCATTCGCAAAACAGTCATCCACAATCGAGTAGTGCTATCGTGAGCGGCATTGGAAATCAAATGACATCATCGGCCAGTTCGCATTCCAGCGAATCGTCACAGGGTAGCGGTAGAAACGGTGGAGAGCCTAGAGAGACCAGCAATCATTCGCAGAGTAACTCGACAGGCACGAATCATCAGCAACAGACCAGCTGGAGCTTCGAAGAGCAGTTCAAACAGCTCTATGAGATTAACGACGATCCGAAAAGAAAAGAGTTTCTGGATGACCTCTTCAGCTACATGCAGAAACGGGGAACACCGATCAACCGACTGCCAATAATGGCAAAATCGGTACTTGATCTATACGAGCTGTATAATTTAGTGATTGCTCGGGGCGGACTCGTAGACGTAATCAACAAGAAGCTCTGGCAGGAAATCATCAAAGGCCTCCACCTGCCATCAAGTATCACTTCCGCCGCGTTCACTCTACGCACCCAGTACATGAAATACCTGTATCCGTACGAGTGCGAGAAGAGACGCCTATCAACACCGGCGGAATTGCAAGCGGCGATCGACGGGAATCGTCGGGAGGGACGTCGAAGCAGTTACGGGGCATACGCGACGAGCAGCAGCACGACGAACGAAAGTCTCGTGCAGAGGAACCCCCACACACCCAACTCGCTCGCGTTGCACGCGCAAATGTCACCGTTATCGTTGGTGACAGCGGTAGCGGCTGGTGGTCAACACCATGGACCGCAATCGCTGGTGAATGGAAGCGCCGCGCACACACCCTTACCCCACCATCCACATCATCCGCAACATTCTCAGGGAATAGCAGGCCAATCAAATGCAGGACCTATTCCTGGCATGGCACCATCCGAGTTCGAGGCACGCATGGTCGAGTACGTGAAGCTACTAAACAAAGAACTTAGAAGCGCTGGTGGTGGTACCCCGCCGCCCGTAATTCATCGACAAGGTAGCGCGTCACCTCCACCTTCGACACCACCGAGGGATGGCGCGTTCAGTGCACTGGAAATGTCCCGACTGACCTTGTGGAATATGTACAACAACAATACTCTATACCCAGGAATGGCTCACCAACCGCCCATGTCGCCACAGACTTCGCATTCACCGGTACCTGCACCTCCCAGTCCTGAACCTCAAAGAGAAGCTCTTGATCTCGGTCTCAGGTCTTCGCCTATATGCTTATCACCAGTAAGGCAAAGTTCACCCTCTTCCGGAGGTAGTATGCAAATAAAAAAAGATCAAGATTTAACTAATACACCTGGGCCCCCGCCAGCAAAAAGGTTACTCTCCGAAGAAGATAGTCCGGTGGAGAAGAGTGCAACGGTCGCTACTGGCACGCACATTAAAATTTCCAACCGAGGAGATGGAAGAAACGGTGATAATTCCTTAGTAGTCAGTATGGAGCTAAATGGAGTGATGTATCAAGGTGTTTTGTTCGCTCAAAGTGACAGTAGGACCACGAACAATACACCAGCATGCAGCAACAGCAATTCGAAACCGTCTCGAAGTGTGGTTTCGTGA
- Protein Sequence
- MEMSDEYQDMGNPGGGVAMVNIPITHHQHSPDSPLSHQEEDLSDPDLQDEESGEELPQQPLQGNTHSSSDNASAQASTPTPLTHLSSLMGAHHPHFLTKLKMEAADVDALTNKSGLEALQVAMSGAGFNLPFTFPPPAAFLTPQHHSQNSHPQSSSAIVSGIGNQMTSSASSHSSESSQGSGRNGGEPRETSNHSQSNSTGTNHQQQTSWSFEEQFKQLYEINDDPKRKEFLDDLFSYMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKRRLSTPAELQAAIDGNRREGRRSSYGAYATSSSTTNESLVQRNPHTPNSLALHAQMSPLSLVTAVAAGGQHHGPQSLVNGSAAHTPLPHHPHHPQHSQGIAGQSNAGPIPGMAPSEFEARMVEYVKLLNKELRSAGGGTPPPVIHRQGSASPPPSTPPRDGAFSALEMSRLTLWNMYNNNTLYPGMAHQPPMSPQTSHSPVPAPPSPEPQREALDLGLRSSPICLSPVRQSSPSSGGSMQIKKDQDLTNTPGPPPAKRLLSEEDSPVEKSATVATGTHIKISNRGDGRNGDNSLVVSMELNGVMYQGVLFAQSDSRTTNNTPACSNSNSKPSRSVVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00360694;
- 90% Identity
- iTF_00214811; iTF_00224347; iTF_00231781; iTF_00214193; iTF_00216174; iTF_00221719; iTF_00232405; iTF_00230496;
- 80% Identity
- -