Bbet012363.1
Basic Information
- Insect
- Biston betularia
- Gene Symbol
- -
- Assembly
- GCA_905404145.1
- Location
- FR989865.1:2616329-2625796[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 29 0.015 1.2 10.3 1.8 2 23 206 228 205 228 0.96 2 29 0.0018 0.14 13.3 0.7 2 21 264 283 263 284 0.92 3 29 0.00011 0.0086 17.1 0.4 2 23 321 343 321 343 0.97 4 29 7.1 5.7e+02 1.9 0.3 2 13 376 387 375 396 0.82 5 29 0.0013 0.1 13.7 0.4 1 23 406 429 406 429 0.97 6 29 0.97 78 4.6 0.1 1 23 444 466 444 466 0.94 7 29 0.00023 0.018 16.1 1.0 2 23 509 530 508 530 0.95 8 29 0.0021 0.16 13.0 5.4 2 23 571 593 570 594 0.96 9 29 8.8e-06 0.00071 20.5 1.3 1 23 643 666 643 666 0.97 10 29 0.0042 0.34 12.1 0.2 1 23 723 745 723 745 0.97 11 29 0.0034 0.27 12.4 7.3 1 23 756 778 756 778 0.98 12 29 0.26 21 6.4 0.8 2 23 790 811 789 811 0.92 13 29 0.0035 0.28 12.3 1.0 1 23 821 843 821 843 0.98 14 29 0.29 23 6.3 4.7 2 23 871 892 870 892 0.95 15 29 0.0031 0.25 12.5 4.6 1 23 903 925 903 925 0.97 16 29 8e-05 0.0064 17.5 0.3 1 23 933 955 933 955 0.97 17 29 0.0027 0.22 12.7 0.2 2 23 975 997 974 997 0.97 18 29 0.17 13 7.0 0.3 1 23 1015 1037 1015 1037 0.96 19 29 0.76 60 5.0 2.2 1 23 1044 1066 1044 1066 0.94 20 29 0.011 0.91 10.7 0.9 2 23 1077 1099 1076 1099 0.95 21 29 0.004 0.32 12.1 0.2 1 23 1121 1143 1121 1143 0.97 22 29 0.051 4.1 8.7 0.2 2 23 1224 1245 1223 1245 0.91 23 29 0.1 8 7.7 1.1 5 23 1255 1273 1253 1273 0.92 24 29 0.0081 0.65 11.2 0.7 2 23 1284 1306 1283 1306 0.95 25 29 0.4 32 5.8 0.5 2 21 1323 1339 1323 1341 0.73 26 29 3.5 2.8e+02 2.9 1.9 2 20 1345 1363 1344 1365 0.91 27 29 0.46 37 5.6 1.9 2 23 1414 1435 1413 1435 0.93 28 29 0.004 0.32 12.1 0.6 2 23 1446 1468 1445 1468 0.97 29 29 1.4 1.1e+02 4.1 0.9 2 20 1506 1524 1506 1526 0.93
Sequence Information
- Coding Sequence
- ATGGCCCTCAAACTTGGAAAATGCAGGCTATGTCTTAAGCTCGGCGATTTCTACTCCATTTTTACGGTTGACAATGCCGTCCAACTTGCAGAGATGGTTATGGAATGCTCAAGGATAAAAGTTTATGAAGGAGATGGCTTACCAGATAAAGTATGTGCCGAGTGCATACAAAAGCTCAGCAGTGCCTATATATTCAAACAACAGTGTGAGAGAGCTGATCAGGAGTTGAGGCGGAACTATGTACCACCTCCAGGCTTCAGTATAAGCCCACCGCCTCCGAATAGACAAAGTAGCGATTCAGCATTTTCGACGCACACCGACAGCTCCAACATAAAGTCGTCATTCACAGAAAACAAAGTAACACCGGTTAAAAGAAATAGAAAGAGAAGCGTTGAAAGCGATAATGCGTCTGAAGCTAGTCGATCACAGGACTACGGCCGACCCAGCAGCTCCAAACGCGTCGAAGAGCTTCGCAGAACGCAGAAAAGGCCACGACTTTCTGTCAACAACTCGAACTCTCAGTGCGATTCCGATTACGAAGACAACGGAGGCTCCAGCTATGTCCCGGAGACGGATAATGATTCTGATGAACCGCTCATCAACCCCAACGAAAACAAATGTGACTTTTGCAGCAAAACCTTCCGATGGAGAAAAAGCTTGAAGGCCCACGTGAAGAATGTCCATGGAAAGAAAGATTTTAGTTTTGACGTCGTCGCTGGTAACTCCGTCACTGCCGTCAATCCACCTAAAAAATCTACCGATACGAAGCTCAGCGACGATGAGAAGCTGAATTGCTCTCGATGCGACAAAACTTTCAAATTGAAGATTATGCTAAAGAGACATTTAGAAACGTGCACGGGAAAGTCGCCTCTAAAGTTACCCGTAAAGTCACCGCAAAAAGAGCTGTTTATATCCTTGGAACCAATAGATGCCGTACACAAGATTACGGTAAAGAAACCTACCTGCGAATACTGCACGGCCAAATTCAAAACCGTGGAAAATTTGGAGAAACATCTTAGAATCGTCCATGCGGCTGTTCTGAAGAAAGAAATCGACACGAAGGTGACAAAGGCCGGTCCGAAACCGGGCCTGAAGTTCAAGGAGGGCTCCAATGTGTTCACTATCCCATGTGTTTACTGTCAGAAGCCGTTCGATGATTACTATGTACATCAATCCCACTTCAATACATGCCCACAGAAGGACATGCGATCCGTTTATGAATGTCCGATCTGCCAGAAAATATCAAGCCGGAAAAATGGTTACTTCATCCACTTAAAGAACATCCATTTCGAACCTCGAGCGACGAAGCTCGAGGGTCCGTCGGCGTCCTTCGAATGTCGAATATGCAGTAAGAAACTGCTCTCTCAGGAAATGCTCGTCACTCATTTGGCAGCTCATGCATCAAATATAGACGACGATAACGACGAGACTGCTCACGACGATGGTGATTCGAGACAAAGCACCTTTGAAGATTCAGCATCCATCCACTCTACTCAAAGCACGCCTGCCCCCGGCGGCCCACTAAAATGCAACGTGTGTGACAAAGAGTTCAAGTACCGCAAGTCGCTCGTCAACCACGAGGCGAAACACACAGAAGACGAAATACGAGTAAAAAATGAACCCCCAGATAAATCATCGATGAGTTTACTAAGTGAGGCCAACCGGGAGTCTGATTTTGAATCTAGTCAAGACGACGAGGCGGACGACCTAACCTGCGACATCTGTGAGAAAATGTTCTCTTACAAACGCCTCCTCGACCACCACAAGAGAACAAAGCACCATATGTCATCCGGGACGAAACGAGCGAAAATAAACCTTAAAGACTGCTCTGTGAGGTGCTTGCTGTGCGACATGGAGATGAAAGTCAGCGCTATCAATGAGCACAATCAGAAGCATATATCTATGAATGTGAAGCCACGGAACATCTACACATGTGCCGAGTGCGGGCAGAAGTTCAAAAGTTGTAGCAATTTGGCGAGTCATATTAAATTAGTTCATAGGTTGAAGCACACACAAGAGCAGGTTCCGCGGCAGTTCCTGGGCGCGGACATGGCGGATTTTTGTGAAGTCGTTGTGACGAAGGCGGAACCCCTGGACCACATCCAGAGTCACAACGGCTTTGGCGAGGTTCCGTCTCAGGCGGCTCCAACAGTGGACCTCAGCGGGTTCACGTGTCCAATCTGTAGCAAGAAGATGCCCACGCTCATCTCGCTGAAGCGTCACGTCAACTGGCACTCGTACGTCGGCGCCAATCTTGAAAAGAAGTACGAGTGCTTTGTCTGCAAAGAGACATTTAAGTTCCAGTGCCACTTCAAGATCCACATGCGCGAACATTACCACGACCCCAATATCGACCCGGTGCTGCTCACTTGCTCCATCTGCGGTCGCAAGAGCAAGCATCTCCGCGCAGCCCAGGCACACAACAACTGGCACAAACAAACGCGTTTCCAAAACAAAGATTACCAGTGCTCAATATGCAAACGCGTCTTTCAATACAGAAAGGTCTACTTATCCCATATGGCCATACATTATAAGAAGGGAGAGAGTGCCATGAATACTGTAGTTGGAGATATGAATTGGGCCGATAAAGGAGCCATAGATGGGACCACAACGTGCCATCTCTGCGGGAAAGTCTGCCTGTCCGAAACTTCTTTGAAGCATCACCTCATCTGGCACAAATCGAAAACTCTGTTGTACGGAGCGAGGCATGAGTGCCAGATGTGCCAGCTGCAGTTTACCAACAAGCGACATTTAGAGCTGCACACTCGAGCGCATTACGAAGACGAGAATGGTCCGTTCAAGTGCAATATCTGCGGGAAAGGATATATCGATGAAGAATACATGCGGCGGCATGTCAAAGGGCACAATTTCGATCACTCGTCGCACAAGAAGCGGCTCGAGAAACTGCGCAAAGATAAAGTGAAATGTCCGATTTGTTCCCGATATTATCCTGACTTGGTGCGACTGATTAGACATTTACGGCGAACGCATCCCGAGTCGAAAATGATCAAAGAAGATCCGGACGCGCCTCCTCCTGCTTATTTCTCTTGCAAGCTCTGCGCTAAGGTGTTCCTAGACGAGGCTCGGCTGAAGAAACACGAAGAAATGCATTTACGGAAGCCAAACTTCTTCCGATGCAAGTTCTGCGGTCGAAAGACGATCTCTCTGAAAGCGCACAATGTACACATCAAGGGGCATCTGACGAGGAAGCACGTGGATAATCCGCTGAAGTGTCCGCAGTGCGATGAAGTGTTTATACTTGGATACGCGCTTCACCATCATTTGAGAGATACGCATGGAGTGAACGAGACTTGGATCTCTGAACGAGCGGACGCGCCCCTGGCAGGACCTCTTAAAGAGTTCCAGTGTGCAGTTTGTTTGAAAGTCCTCGCTAGCAAAGGCAACTTCGAACGGCATCTCGATTATCACAACTCTTTGCGGTGCAATTATTGCTATGATTACTTCGGCGGGCTTCGGTTCCTGGAAGGGCACTTGGCGTTCAGCTGTGACAAGAAGAAGCTCGTCGGCGACACAGAGGTGCATCCGCGGCGAATCAAGTGCGAGCTGTGCTATAAGGCCTTCCATCTGCAGGTGAAGCTGGACTGTCACCTGCGCACGCGGCACGGCGTGTCGGTGGAGAGGCGCGCCGGCGCGGCGAGCGCGGACACCGTCTGCGACTACTGCTTCCGAACATTCGAGAACGAGTACGCGCTCGCCGGGCACAAGGTGTACCACCGCTCCGTCGGATATTTCGGCTGCATCTACTGCCCCAGGAAGTTCAACACGCGCGCCGCCTACAACAGGCACAAGACTCAGCACCTCTACACGCTCAACGCTGACGACCCCACCAAGTGCGAGCACTGCGACGAGACGTTTGTCGCCTTCCGCGACATGATCGATCACATGAGAGACGAGCACGGGGACGACAAAGAGTGGATCATAGAGCCGAAGGAGTCTATAGAGGAGAAGTGCCCCATATGCGAGAAAATGTTCTACAATTTACCGCGCCATCTGCAGTACCACGAGGAAAACAAGTGCAAAAAATGCAGCGAGTACTTCAACTCGCGGCTCGAGTACGATAACCATCTGTGCGCGATCGAAAGCGACGCCGATGACGAAGTATTCGGCGGAGACGCGCCGGCGCGAGTTTACGAGGAATGCACCTTCTGCTTCAAACCGATCACCAAGAAGGACTCGAAGAAGAAGCACGATATCTTGCACAAGACGTCGGGCGCGATCTCGTGCCGGTTCTGTCACCTCAAGTTCAAAACCATCGACGCGTTCAACATTCACGCGTTCTCCCACCGCAGCCGCAAGTACGTGAAGCGGCCGATCAAATGCCGCGTGTGCAAGGAGCGCTTCGTGAAGTACGGGCCCTTCATCAAGCACATGAAAACAGCGCACAAGTTGACAAAGAAGTTGCATTACCGGGCGACGGTGAAGCCAGAGCGGTGCGTCGTCTGCGGGGAGTTCCTGCCGAACTTGCACAACCACTACCGCGCTCATCTCCTCAACCGCTGTCAGCTGTGCGCGAAATACTTCATTTCCTCGCGACTGTACGCGCGACACGAGTGCGACAAAGAAGACGCCGATCCTGCGAAAGTGTTCACTTCCGACGTGGACCTGTCGGCGCTTATAGCTTCCTACACTCCCAAAGACGAGAGGGACGACGAGAAATACTACGGGTACACAGACGACGAGGAGGACGCGGAGCCCGAGCCGGTAGAGTTGGCAGCGCACACGAAGGCTAAAGACGTTAAGACTTTCTCGAAGCTGGCGAAGCGACCTCGAATTACCGAGCTGCCGAGGTCGCAACCGATAGACAGCCAGCTCGCGGAGGACGAGCGCAACTTGCACATGATGGTGCAGTCTCCGATCATATCGGACGTGCTCTCACTCTACCAGAAGAAGGAGATCGACGGGGACTCCAAGAGTCAGACGAGTCAGGCCGACGATATCGTCGACCTTAGCGATGATTCGTTGGATGCGACGGATGTGAACGCGCCGGTTGTTGTCATCGACGATTCTAGTTAA
- Protein Sequence
- MALKLGKCRLCLKLGDFYSIFTVDNAVQLAEMVMECSRIKVYEGDGLPDKVCAECIQKLSSAYIFKQQCERADQELRRNYVPPPGFSISPPPPNRQSSDSAFSTHTDSSNIKSSFTENKVTPVKRNRKRSVESDNASEASRSQDYGRPSSSKRVEELRRTQKRPRLSVNNSNSQCDSDYEDNGGSSYVPETDNDSDEPLINPNENKCDFCSKTFRWRKSLKAHVKNVHGKKDFSFDVVAGNSVTAVNPPKKSTDTKLSDDEKLNCSRCDKTFKLKIMLKRHLETCTGKSPLKLPVKSPQKELFISLEPIDAVHKITVKKPTCEYCTAKFKTVENLEKHLRIVHAAVLKKEIDTKVTKAGPKPGLKFKEGSNVFTIPCVYCQKPFDDYYVHQSHFNTCPQKDMRSVYECPICQKISSRKNGYFIHLKNIHFEPRATKLEGPSASFECRICSKKLLSQEMLVTHLAAHASNIDDDNDETAHDDGDSRQSTFEDSASIHSTQSTPAPGGPLKCNVCDKEFKYRKSLVNHEAKHTEDEIRVKNEPPDKSSMSLLSEANRESDFESSQDDEADDLTCDICEKMFSYKRLLDHHKRTKHHMSSGTKRAKINLKDCSVRCLLCDMEMKVSAINEHNQKHISMNVKPRNIYTCAECGQKFKSCSNLASHIKLVHRLKHTQEQVPRQFLGADMADFCEVVVTKAEPLDHIQSHNGFGEVPSQAAPTVDLSGFTCPICSKKMPTLISLKRHVNWHSYVGANLEKKYECFVCKETFKFQCHFKIHMREHYHDPNIDPVLLTCSICGRKSKHLRAAQAHNNWHKQTRFQNKDYQCSICKRVFQYRKVYLSHMAIHYKKGESAMNTVVGDMNWADKGAIDGTTTCHLCGKVCLSETSLKHHLIWHKSKTLLYGARHECQMCQLQFTNKRHLELHTRAHYEDENGPFKCNICGKGYIDEEYMRRHVKGHNFDHSSHKKRLEKLRKDKVKCPICSRYYPDLVRLIRHLRRTHPESKMIKEDPDAPPPAYFSCKLCAKVFLDEARLKKHEEMHLRKPNFFRCKFCGRKTISLKAHNVHIKGHLTRKHVDNPLKCPQCDEVFILGYALHHHLRDTHGVNETWISERADAPLAGPLKEFQCAVCLKVLASKGNFERHLDYHNSLRCNYCYDYFGGLRFLEGHLAFSCDKKKLVGDTEVHPRRIKCELCYKAFHLQVKLDCHLRTRHGVSVERRAGAASADTVCDYCFRTFENEYALAGHKVYHRSVGYFGCIYCPRKFNTRAAYNRHKTQHLYTLNADDPTKCEHCDETFVAFRDMIDHMRDEHGDDKEWIIEPKESIEEKCPICEKMFYNLPRHLQYHEENKCKKCSEYFNSRLEYDNHLCAIESDADDEVFGGDAPARVYEECTFCFKPITKKDSKKKHDILHKTSGAISCRFCHLKFKTIDAFNIHAFSHRSRKYVKRPIKCRVCKERFVKYGPFIKHMKTAHKLTKKLHYRATVKPERCVVCGEFLPNLHNHYRAHLLNRCQLCAKYFISSRLYARHECDKEDADPAKVFTSDVDLSALIASYTPKDERDDEKYYGYTDDEEDAEPEPVELAAHTKAKDVKTFSKLAKRPRITELPRSQPIDSQLAEDERNLHMMVQSPIISDVLSLYQKKEIDGDSKSQTSQADDIVDLSDDSLDATDVNAPVVVIDDSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00634735;
- 90% Identity
- iTF_00207200; iTF_00666718; iTF_00034025;
- 80% Identity
- -