Basic Information

Insect: Agriopis marginaria
Gene Symbol: -
Assembly: GCA_932301435.1
Location: CAKOAR010000170.1:2645487-2656220[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 28 0.0018 0.11 13.4 2.4 2 23 207 229 206 229 0.96

2 28 0.003 0.18 12.7 0.9 2 22 265 285 264 285 0.94

3 28 0.00011 0.0067 17.2 0.4 2 23 322 344 322 344 0.97

4 28 4.5 2.6e+02 2.7 0.6 2 13 377 388 376 397 0.82

5 28 0.0004 0.024 15.4 0.3 1 23 407 430 407 430 0.97

6 28 0.41 24 6.0 0.1 1 23 446 468 446 468 0.94

7 28 0.0032 0.19 12.6 0.9 2 23 511 532 510 532 0.96

8 28 0.037 2.2 9.3 3.1 2 23 574 596 573 596 0.96

9 28 6.9e-06 0.00041 21.0 1.3 1 23 646 669 646 669 0.97

10 28 0.0005 0.03 15.1 0.1 1 23 726 748 726 748 0.97

11 28 0.03 1.8 9.6 9.1 1 23 759 781 759 781 0.97

12 28 0.01 0.61 11.0 0.7 2 23 793 814 792 814 0.96

13 28 0.004 0.24 12.3 1.0 1 23 824 846 824 846 0.98

14 28 0.22 13 6.8 1.9 2 23 873 894 872 894 0.95

15 28 0.00064 0.038 14.8 3.7 1 23 905 927 905 927 0.97

16 28 4.4e-05 0.0026 18.4 0.4 1 23 935 957 935 957 0.98

17 28 0.003 0.18 12.7 0.2 2 23 977 999 976 999 0.97

18 28 0.19 11 7.0 0.3 1 23 1017 1039 1017 1039 0.96

19 28 0.85 50 5.0 2.2 1 23 1046 1068 1046 1068 0.94

20 28 0.023 1.4 9.9 1.0 2 23 1079 1101 1078 1101 0.95

21 28 0.023 1.4 9.9 0.2 1 23 1123 1145 1123 1145 0.97

22 28 0.075 4.5 8.3 0.5 2 23 1226 1247 1225 1247 0.91

23 28 0.11 6.7 7.7 1.1 5 23 1257 1275 1255 1275 0.92

24 28 0.03 1.8 9.5 0.7 2 23 1286 1308 1285 1308 0.95

25 28 0.97 58 4.8 0.6 2 21 1325 1341 1325 1343 0.72

26 28 0.52 31 5.6 1.9 2 23 1416 1437 1415 1437 0.93

27 28 0.006 0.35 11.7 0.8 2 23 1448 1470 1447 1470 0.97

28 28 1.2 73 4.5 1.1 2 20 1508 1526 1508 1528 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	28	0.0018	0.11	13.4	2.4	2	23	207	229	206	229	0.96
2	28	0.003	0.18	12.7	0.9	2	22	265	285	264	285	0.94
3	28	0.00011	0.0067	17.2	0.4	2	23	322	344	322	344	0.97
4	28	4.5	2.6e+02	2.7	0.6	2	13	377	388	376	397	0.82
5	28	0.0004	0.024	15.4	0.3	1	23	407	430	407	430	0.97
6	28	0.41	24	6.0	0.1	1	23	446	468	446	468	0.94
7	28	0.0032	0.19	12.6	0.9	2	23	511	532	510	532	0.96
8	28	0.037	2.2	9.3	3.1	2	23	574	596	573	596	0.96
9	28	6.9e-06	0.00041	21.0	1.3	1	23	646	669	646	669	0.97
10	28	0.0005	0.03	15.1	0.1	1	23	726	748	726	748	0.97
11	28	0.03	1.8	9.6	9.1	1	23	759	781	759	781	0.97
12	28	0.01	0.61	11.0	0.7	2	23	793	814	792	814	0.96
13	28	0.004	0.24	12.3	1.0	1	23	824	846	824	846	0.98
14	28	0.22	13	6.8	1.9	2	23	873	894	872	894	0.95
15	28	0.00064	0.038	14.8	3.7	1	23	905	927	905	927	0.97
16	28	4.4e-05	0.0026	18.4	0.4	1	23	935	957	935	957	0.98
17	28	0.003	0.18	12.7	0.2	2	23	977	999	976	999	0.97
18	28	0.19	11	7.0	0.3	1	23	1017	1039	1017	1039	0.96
19	28	0.85	50	5.0	2.2	1	23	1046	1068	1046	1068	0.94
20	28	0.023	1.4	9.9	1.0	2	23	1079	1101	1078	1101	0.95
21	28	0.023	1.4	9.9	0.2	1	23	1123	1145	1123	1145	0.97
22	28	0.075	4.5	8.3	0.5	2	23	1226	1247	1225	1247	0.91
23	28	0.11	6.7	7.7	1.1	5	23	1257	1275	1255	1275	0.92
24	28	0.03	1.8	9.5	0.7	2	23	1286	1308	1285	1308	0.95
25	28	0.97	58	4.8	0.6	2	21	1325	1341	1325	1343	0.72
26	28	0.52	31	5.6	1.9	2	23	1416	1437	1415	1437	0.93
27	28	0.006	0.35	11.7	0.8	2	23	1448	1470	1447	1470	0.97
28	28	1.2	73	4.5	1.1	2	20	1508	1526	1508	1528	0.93

Sequence Information

Coding Sequence: ATGGCCCTCAAACTCGGAAAATGCAGATTATGTCTCAAGCTCGGCGATTTCTACTCTATTTTCACGGTTGACAATGCCGTACAACTTGCGGAGATGGTTATGGATTGCGCGAGGATAAAAGTATACGAAGGAGATGGATTACCAGATAAAGTATGTGCCGAGTGTGTACAGAAGCTCAGTAGTGCCTACATATTCAAACAACAGTGTGAGAGAGCTGATCAAGAGTTACGGCGGAACTATGTCCCTCCTCCGGGCTTCAGTATCAGTCCACCACAGCCGACTAGACAAAGTAGCGATTCGGCGTTTTCAACACACACAGAAAGCTCAAACATAAAGTCGTCTTTCATAGAAAGCAAAGTTACACCAGTCAAAAGAAGTAGGAAAAGAAGTGTCGAAAGCGATAATGCATCTGAAGCGAGTCGGTCACAAGACTATGGCCGACCCAGTAGCTCCAAACGAGTAGAGGAACTCCGTAGAACGCAGAAAAGACCGAGACTATCCGCTAACAACAGTAACAACTCCCAGTGCGATTCCGATTACGAAGACAATGGAGGCTCCAGCTATGTCCCGGAGACTGATAACGATTCTGACGAACCGCTTATCCGGCCTAACGAAAACAAATGCGAATTCTGCAACAAAACTTTCCGGTGGAGGAAGAGTTTAAAGGTTCACATGAAAAACGTCCATGGAAAGAAGGATAGTTTTGATGCACTCGTCACTGCCAATTCCATCACTGCCGTCAGCACACCCAAAGAGCATGAGGATACGTCTTTTGATGATGACGAGAAGCTGAATTGCTCCCGATGCGACCAAACTTTCAAACTAAAGATTATGTTAAAAAGGCACATTAAAACGTGCACCGGAAAGACACCTGTAAAGTCACCTGTAAAGTCACCACAAAAAGAGTTATTTATAACCTTGGAACCAATCGATGCTGTACACAAGATCACGGTAAAGAAACCTACTTGCGAATACTGCACGGCCAAATTCAAAACTGTCGAAAATCTAGAGAAACATCTTAGAGTTGTGCATGCAGCAGTTTTGAAGAAAGAGATCGACGCTAAAGTAGCCAAATCTGGTCCGAAACCAAGCCTGCAGTTCAAGGAAGGCTCCAATGTGTTTACCATACCATGCGTCTACTGTCACAAGCCATTTGATGATTACTACGTCCACCAATCTCACTTCAACACATGCCCAAAAAAGGACACGCGTTTTGTTTTCGAATGCCCGATCTGCCAGAAGGTGTCGAGCCGGAAAAATGGTTACTTTATCCACATAAAGAACATCCACTTCGAACCTCGAGCGAGCAAGCCCGAAGACCAGTCGGAATCTTCCTTCGAATGTCGCATATGTAATAAGAAACTGCTCTCGCAAGAAATGCTCGTCACGCATTTGGCAGCTCACGCGTCCAATATAGACGAGGATAACGATGACAACGCACACGACGATGGCGATTCGAGACCGAGCACCTTTGAAGATTCAGCGTCCATGCACTCGGCTCACAGCACGCCTGTGCCAGGTGGGCCACTCAAATGCCGCGTGTGCGAAAAAGAGTTCAAGTACCGCAAGGCGCTTATCACTCACGAGGAGAAACATGCAGAGGACGAAATACGAGTGAAAAATGAACCTCCGGACAAACACTCAATGAGTTTATTGAGCGAGACCCACCGTGAGTCTGATTTTGAATCTAGTCAAGATGACGATGAGGCGGATGACCTAACCTGCGATATATGTGAGAAAATGTTCTCCTACAAACGCATACTTGATCACCACAAGAGGACGAAGCACAACATGTCTTCAGGCACGAAGCGTGCGAAAATAAACCTTAAAGACTGCTCTGTAAGGTGCTTGCTCTGCGACTTGGAGATGAAAGTAAGTGCCATCAATGAGCACAATCAGAAGCACATTTCCATGAACATCAAGCCGAGGAACATTTATACTTGTGCCGAGTGCGGACAGAAGTTCAAGAGTTGCAGTAATTTGGCGAATCATATTAAGCTAGTTCACAGGTTGAAGCATACACAAGAGCAAGTGCCGCGGCAGTTCATTGGCGCAGATCTGGCGGATTTTTGTGAAGTCGTTGTGACCAAGGCGGAACCCCTGGACCCAATCCAGAGTCACAACGGCTTTGGCGAGGTTCCGTCGCAGGGGGCTCCAACAGTGGACCTTAGCGGGTTCACGTGTCCCATCTGTGGCAAGAAAATGGCTACTCTCATCTCACTGAAGCGCCATGTCAACTGGCATTCATATGTGGGCGCCAATCTAGAGAAGAAACACGAGTGCTTCGTTTGTAAGGAGACATTCAAGTTCCAATGCCACTTCAAGATCCACATGCGCGAGCACTACCATGACCCGAACATCGACCCTGTTCTGCTAACCTGCTCCATCTGCGGACGCAAGAGCAAACACCTCCGCGCAGCGCAGGCGCACATGAACTGGCACAAACAAACACGCTTCCAGAACAAAGACTACCAGTGCTCCATATGCAAGCGCGTCTTCCAATACAGAAAGGTCTACTTATCCCACATGGCTATACATTACAAGAAGGGAGAGAGCGCCATGAATACTATAGTCGGTGATATGACTTGGGGTAAGGCATCCCTCGATGGGACTTCAACCTGCCAGCTTTGCGGGAAGGTCTGTCTATCTGAAGTCTCGTTGAAGCATCACCTCATTTGGCACAAGTCGAAAACTCTTTTATACGGAGCGAGGCACGAGTGTCAGATGTGTCAACTCCAGTTCACTAACAAGCGTCACCTGGAGCTTCACATCCGGGCGCACTACGAGGACGAGAATGGTCCGTACAAGTGCAACGTTTGCGGGAAAGGATATATCGATGAAGAGTACATGCGGCGGCACCAGAAAGGACACAATTTCGACCACTCTTCCCACAAAAAGAGGCTCGAAAAACTTCGAAAAGATAAGGTGAAGTGTCCGATTTGCTCGCGGTACTATCCCGATTTGGTGCGATTGATTCGACATTTACGGCGCACGCATCCAGAATCCAAAATGATTAAAGAAGACCCGGATGCCCCGGCTCCTTCTTATTTCTCTTGCAAGCTCTGCGCCAAAGTTTTCCTTGACGAGGCCCGACTCAAAAAGCATGAAGAAATGCACTTGCGGAAGCCGAACTTCTTCCGATGCAAGTTCTGCGGCCGAAAGACGATATCTCTCAAAGCGCACAATGTTCACATTAAGGGACATCTGACGAGAAAGCATGTGGATAATCCGCTGAAGTGTACGCAATGTGACGAAGTGTTTGTGCTAGGGTATGCGTTACATCATCACTTGCGCGACGTGCACGGAGTGAACGAGACGTGGATTGCGGAGCGAGCCGATGCGCCTCTCGCAGGCCCGCTTAAAGAATTCCAGTGCGCCGTCTGTATGAAAGTCCTTGCTAGTAAAGGCAACTTCGAGCGGCACCTGGACTACCACAACTCTCTGCGCTGCAACTACTGCTTCGACTACTTTGGAGGGCTGCGGTTCTTGGAGGGTCACCTTGCGTTCAGCTGTGAGAAGAAAAAGCTGGTTGGAGATACGGAGGTGCATACGCGACGCATCAAGTGCGAGTTGTGCTACAAGGCCTTCCATCTGCAGGTGAAGCTGGACTGCCACCTGCGCACGCAGCACGGCGTGTCGGTGGACCGGCGCGCGGGCGCCGCCAGCGCGGACACCGTCTGCGACTACTGCTTCCGAACATTCGAGAACGAGTTCGCGCTCACCGGACACAAGGTGTACCACCGCTCCGTCGGGTACTTCGGCTGCATCTACTGCCCGCGCAAGTTCAACACGCGCGCCGCCTACAACAGACATAAGACGCAGCACCTGTACACACTGAACGCCGACGACCCCACGAAATGCGAACACTGCGACGAAAAGTTCGTCGCTTTCCGCGACATGATCGATCACATGAAGGAAGCACACGGCGACGACAAGGAATGGATTGTCGAACCGAAGGAGTCGATCGAGGAGAAGTGCCCGATATGTGAGAAGCAGTTCTACAACCTGCCGCGCCACCTGCAGTACCACGAGGAAAATAAATGCAAGAAGTGCAATGAGTACTTTTATTCGCGGCTCGACTGCGACAACCACCTGTGCGCGATCGAAAGTGACGCCGAGGAAGAAACGTTGGGCGGCGATACACCGGCGCGAGTTTATGAAGAATGCACCTTCTGCTTCAAGCCGATCACCAAGAAAGACTCCAAGAAAAAACACGATATCTTGCACAAGACGTCGGGTGCAATCTCGTGTCGCTTCTGCCACCTCAAGTTCAAAACCATCGACGCGTTTAACATTCACGCGTTCTCTCACCGCAGCCGCAAGTACGTGAAGCGCGCGATCAAGTGCCGAGTGTGCAAAGAGCGCTTTATCAAGTATGGACCTTTCATGAAGCACATGAAAACAGCGCACAAATCTACCAAGAAGCTGCATTACCGCGCCGTGGTGAAGGCGGAGAGGTGCGTCGTGTGCGGGGTGTATCTGCCAAACTTGCACAACCACTATCGCGCTCACCTCACCAACCGCTGCCAGCTGTGCGCAAAATACTTCATCTCCTCGCGACTGTTCGCGCGACACGAGTGCGACAAAGAGGACGCAGACCCTTCCAAAGTGTTCACATCTAACGCAGACCTGCCCGCGCTTATAACCTCCTACATTCCCAAAGACGAGAAGGACGATGAAAAGTTTTATGGTTATACAGACGACGAGGAAGACCCGGAGCCCGAACCGGAGGAGTTGCCGACGCAACCGAAGCCCAAGGTCCTCAAAACTTACTCGAAGCCGGCGAAGCGACCTCAAATCGCCGAGTTGCCGAGATCTCAGCCTATTGACAGCCAGCTGGCGGAAGACGAGCGCAACTTGCACATGATGGTTCAGTCTCCGATCATTTCTGACGTGCTCTCTCTATATCAGAAACAGGAGATCGACGGGGACTCCAAGAGCCAGACGAGTCAGTTCGGGGATGTGGTCGACGTCAGCGATGATTCTCTAGATGCGATTGATCTCAACGCGCCCGCCGATGTTGTCGTCATTGACGATTCAAGTTAA
Protein Sequence: MALKLGKCRLCLKLGDFYSIFTVDNAVQLAEMVMDCARIKVYEGDGLPDKVCAECVQKLSSAYIFKQQCERADQELRRNYVPPPGFSISPPQPTRQSSDSAFSTHTESSNIKSSFIESKVTPVKRSRKRSVESDNASEASRSQDYGRPSSSKRVEELRRTQKRPRLSANNSNNSQCDSDYEDNGGSSYVPETDNDSDEPLIRPNENKCEFCNKTFRWRKSLKVHMKNVHGKKDSFDALVTANSITAVSTPKEHEDTSFDDDEKLNCSRCDQTFKLKIMLKRHIKTCTGKTPVKSPVKSPQKELFITLEPIDAVHKITVKKPTCEYCTAKFKTVENLEKHLRVVHAAVLKKEIDAKVAKSGPKPSLQFKEGSNVFTIPCVYCHKPFDDYYVHQSHFNTCPKKDTRFVFECPICQKVSSRKNGYFIHIKNIHFEPRASKPEDQSESSFECRICNKKLLSQEMLVTHLAAHASNIDEDNDDNAHDDGDSRPSTFEDSASMHSAHSTPVPGGPLKCRVCEKEFKYRKALITHEEKHAEDEIRVKNEPPDKHSMSLLSETHRESDFESSQDDDEADDLTCDICEKMFSYKRILDHHKRTKHNMSSGTKRAKINLKDCSVRCLLCDLEMKVSAINEHNQKHISMNIKPRNIYTCAECGQKFKSCSNLANHIKLVHRLKHTQEQVPRQFIGADLADFCEVVVTKAEPLDPIQSHNGFGEVPSQGAPTVDLSGFTCPICGKKMATLISLKRHVNWHSYVGANLEKKHECFVCKETFKFQCHFKIHMREHYHDPNIDPVLLTCSICGRKSKHLRAAQAHMNWHKQTRFQNKDYQCSICKRVFQYRKVYLSHMAIHYKKGESAMNTIVGDMTWGKASLDGTSTCQLCGKVCLSEVSLKHHLIWHKSKTLLYGARHECQMCQLQFTNKRHLELHIRAHYEDENGPYKCNVCGKGYIDEEYMRRHQKGHNFDHSSHKKRLEKLRKDKVKCPICSRYYPDLVRLIRHLRRTHPESKMIKEDPDAPAPSYFSCKLCAKVFLDEARLKKHEEMHLRKPNFFRCKFCGRKTISLKAHNVHIKGHLTRKHVDNPLKCTQCDEVFVLGYALHHHLRDVHGVNETWIAERADAPLAGPLKEFQCAVCMKVLASKGNFERHLDYHNSLRCNYCFDYFGGLRFLEGHLAFSCEKKKLVGDTEVHTRRIKCELCYKAFHLQVKLDCHLRTQHGVSVDRRAGAASADTVCDYCFRTFENEFALTGHKVYHRSVGYFGCIYCPRKFNTRAAYNRHKTQHLYTLNADDPTKCEHCDEKFVAFRDMIDHMKEAHGDDKEWIVEPKESIEEKCPICEKQFYNLPRHLQYHEENKCKKCNEYFYSRLDCDNHLCAIESDAEEETLGGDTPARVYEECTFCFKPITKKDSKKKHDILHKTSGAISCRFCHLKFKTIDAFNIHAFSHRSRKYVKRAIKCRVCKERFIKYGPFMKHMKTAHKSTKKLHYRAVVKAERCVVCGVYLPNLHNHYRAHLTNRCQLCAKYFISSRLFARHECDKEDADPSKVFTSNADLPALITSYIPKDEKDDEKFYGYTDDEEDPEPEPEELPTQPKPKVLKTYSKPAKRPQIAELPRSQPIDSQLAEDERNLHMMVQSPIISDVLSLYQKQEIDGDSKSQTSQFGDVVDVSDDSLDAIDLNAPADVVVIDDSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00634735;
90% Identity: iTF_00206324;
80% Identity: -