Basic Information

Insect: Bactrocera minax
Gene Symbol: -
Assembly: None
Location: JAPVRH010008076.1:89342-91827[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 4.8 3.7e+02 2.2 0.1 1 18 87 104 87 104 0.90

2 12 0.18 14 6.7 2.0 1 21 211 231 211 232 0.91

3 12 6.2e-05 0.0047 17.6 0.5 1 23 281 303 281 303 0.98

4 12 9.5e-06 0.00073 20.1 3.3 2 23 324 345 324 345 0.98

5 12 0.002 0.16 12.8 0.8 1 23 371 392 371 392 0.95

6 12 0.0088 0.68 10.8 2.0 1 23 398 420 398 420 0.97

7 12 0.00019 0.015 16.0 0.8 1 23 447 469 447 469 0.97

8 12 6.6e-07 5.1e-05 23.8 1.4 1 23 475 497 475 497 0.96

9 12 0.00015 0.011 16.4 2.1 1 23 503 525 503 525 0.99

10 12 1.8e-06 0.00014 22.4 1.3 1 23 531 553 531 553 0.99

11 12 1.5e-05 0.0011 19.5 0.8 1 23 557 579 557 579 0.98

12 12 0.0007 0.054 14.3 0.3 1 23 591 614 591 614 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	4.8	3.7e+02	2.2	0.1	1	18	87	104	87	104	0.90
2	12	0.18	14	6.7	2.0	1	21	211	231	211	232	0.91
3	12	6.2e-05	0.0047	17.6	0.5	1	23	281	303	281	303	0.98
4	12	9.5e-06	0.00073	20.1	3.3	2	23	324	345	324	345	0.98
5	12	0.002	0.16	12.8	0.8	1	23	371	392	371	392	0.95
6	12	0.0088	0.68	10.8	2.0	1	23	398	420	398	420	0.97
7	12	0.00019	0.015	16.0	0.8	1	23	447	469	447	469	0.97
8	12	6.6e-07	5.1e-05	23.8	1.4	1	23	475	497	475	497	0.96
9	12	0.00015	0.011	16.4	2.1	1	23	503	525	503	525	0.99
10	12	1.8e-06	0.00014	22.4	1.3	1	23	531	553	531	553	0.99
11	12	1.5e-05	0.0011	19.5	0.8	1	23	557	579	557	579	0.98
12	12	0.0007	0.054	14.3	0.3	1	23	591	614	591	614	0.95

Sequence Information

Coding Sequence: atggaaaataactTGCATGAGGGTGGATATGCTGGTGACACATCGGTGAACAACTTGACAGAAAATATCGAATACTTTCAATATGAGGATAATATTGTCACTGGTTGTGAAAACGAATCATTGATTGAATATGTAGAAGAAGATGATGTCTATGTCCAAAATAgtgattatgttgaaaaagaaGCGCTGGAAGAACATGTCAAAACGCATACTTTATCAATAAAACACTTGCAGATCGATGGTCAATCTCAGGAAGTTTATCGTTGCTTGGAGTGTGCTATAGATTTTGTTACTCTCGAGGACTTTACTAAAGTTCATCAAGAAATGCAGAAACAACAATCTAATAAAGctgcaacaaatattaatatcaatgAGACACTTCCAAATGAACAATTAAACGACGAGGAAATCATTGAAAACGCAGACGATAACTGGATGATTATAAAGGAAGAACAGATTATAATGGATGAAAATGAAACTGAAGCGTTTGAGGATTATATAGAAAGAAGTgagaatattattgaaaatacaaatttggaCAAGGAAAATAGCGATACCGTTACTGATACGCTTTTACATGTTAAGGAAGAAAAGCAAGCCATTAGTGACGAAGAAGATGATgaggagaaatatttttgctgtgATTGTCAATTAGTGTTCAGTAATTTAGAAAGCGCAGAGCAACATGTTTGTAGCGCCATAAATACTAGTACAGTTGATCAGGAAGATTCAGATAAAAGTGTAGAACAAGAagattatgaaaataactttgGGTTATATTTTGAAGAGCAGAAGCAAACATTAGGTACTTCGAAAAAGAGCGAAAACAAGGAAGTACAATATTACTGTGCCGAATGtgataagaaatttaattctcTTCAAGgcttacaaatacataaccgtattcacaaaacaaaagagaTTAAGACAGAAAGTGATCCGGTTGATGTAATAGAATTGAAAAGGCCAAAATGTCACATTTGCAATACTATTTTCAGTTCGTATAAGAATCTAAAGTTACACATGAAAATTCATGATGCGCAACAATTGCGATCAATAGAGCAAGCATTGCCGGCTGGCGCCAAAACACAATATAAGGATATGAATAAATtcttttgtgagatatgtaatAAGAGttttgaaCAAAATCTACTTATTATACATAAGAACATGCACCAACAGTCTAATGGGTATAATTGTGGTATCTGCAATCGTCActttgaaaatgaaacaagTTATGACATGCATACGCAAATGCATGCTGACAAAGGCTCGAAACCACGTAAACAACAAATCAAGCCAACGGATGGTAATGGCGCTGATAATCCTGGTGGACGATTTGCTTGTCAATATTGTGGACGAACGTTCCAGCGACCGTTTGAGAAAGTGCGTCATGAGCGTGTGCATACTGGCGAAAAACCGCATGCTTGCGAAGTGTGCGGCAAAACTTTTCGCGTTTCTTATTCGCTGACATTACATCTGCGAACGCACACCGATATACgaccatatgtatgtgcaactTGCAATAAACGTTTCAAATCACAGCCTGTTTATGCTCATCATCTACGCACACACGAAGCGGAACGTGCATACAAATGCGAAACATGTTCAAAATCCTTTCGAACTTCAGTGCAACTTTCGGCGCATAGGAATATACATTCTAAACCGTATAATTGTAAAGTATGTAATCGTCCGTTTGCTTCACTGTATACTGTGAAAGTACACATGAAAACACACAATAAATTTAACCGAACCGCTGACTCAACTAAATACTGTTGCTATGTATGTGGTGCGGAATATGCGAGAGTTTCTGCGTTACGAGTACATATGAAGGATTTACATCTAATCGATTTTGATACGAACCAATCGTTAGATGTAGATGATTTTTTAACGCCAGACGAGCGAAACTCACAACCGCAACACAACATGGATGGAGACGAAGATGAACAAGAAGTGGATCAAGAGGCAGCTATATTGATAGCAGCGGCTGCCGAAGTCGATTGCGCAGCCTATATAGAAGCTGCAACAGCGCATACGCCTGATCCTACAGCTGCGGAAACTGAGAGCATGGCACTTCACTCACAAGTCAATCCATCATATGAAGTTACGCTGCAAAATGAAGAGCTGATTGTGGACAATTACCAGACTGAAGAGATTGTAACTGACTGGTTatcaaagtaa
Protein Sequence: MENNLHEGGYAGDTSVNNLTENIEYFQYEDNIVTGCENESLIEYVEEDDVYVQNSDYVEKEALEEHVKTHTLSIKHLQIDGQSQEVYRCLECAIDFVTLEDFTKVHQEMQKQQSNKAATNININETLPNEQLNDEEIIENADDNWMIIKEEQIIMDENETEAFEDYIERSENIIENTNLDKENSDTVTDTLLHVKEEKQAISDEEDDEEKYFCCDCQLVFSNLESAEQHVCSAINTSTVDQEDSDKSVEQEDYENNFGLYFEEQKQTLGTSKKSENKEVQYYCAECDKKFNSLQGLQIHNRIHKTKEIKTESDPVDVIELKRPKCHICNTIFSSYKNLKLHMKIHDAQQLRSIEQALPAGAKTQYKDMNKFFCEICNKSFEQNLLIIHKNMHQQSNGYNCGICNRHFENETSYDMHTQMHADKGSKPRKQQIKPTDGNGADNPGGRFACQYCGRTFQRPFEKVRHERVHTGEKPHACEVCGKTFRVSYSLTLHLRTHTDIRPYVCATCNKRFKSQPVYAHHLRTHEAERAYKCETCSKSFRTSVQLSAHRNIHSKPYNCKVCNRPFASLYTVKVHMKTHNKFNRTADSTKYCCYVCGAEYARVSALRVHMKDLHLIDFDTNQSLDVDDFLTPDERNSQPQHNMDGDEDEQEVDQEAAILIAAAAEVDCAAYIEAATAHTPDPTAAETESMALHSQVNPSYEVTLQNEELIVDNYQTEEIVTDWLSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00192961; iTF_00190121; iTF_00190817; iTF_00193735; iTF_00191502; iTF_01563097; iTF_01563956;
90% Identity: -
80% Identity: -