Basic Information

Insect: Bactrocera correcta
Gene Symbol: -
Assembly: GCA_027475135.1
Location: CM050325.1:6174905-6177743[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 4.4 5e+02 2.2 0.1 1 18 95 112 95 112 0.90

2 12 0.38 43 5.5 2.1 1 21 218 238 218 239 0.90

3 12 0.00034 0.04 15.1 2.4 1 23 288 310 288 310 0.96

4 12 2.3e-06 0.00026 22.0 1.1 2 23 331 352 331 352 0.98

5 12 0.011 1.3 10.4 0.8 1 23 378 399 378 399 0.90

6 12 0.00058 0.066 14.4 2.8 1 23 405 427 405 427 0.98

7 12 5.8e-05 0.0067 17.5 0.7 1 23 448 470 448 470 0.97

8 12 7.9e-07 9e-05 23.4 0.9 1 23 476 498 476 498 0.96

9 12 0.00013 0.015 16.4 2.1 1 23 504 526 504 526 0.99

10 12 8.6e-07 9.8e-05 23.3 0.8 1 23 532 554 532 554 0.99

11 12 5.1e-06 0.00058 20.9 0.3 1 23 558 580 558 580 0.98

12 12 0.00041 0.047 14.9 0.0 1 23 592 615 592 615 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	4.4	5e+02	2.2	0.1	1	18	95	112	95	112	0.90
2	12	0.38	43	5.5	2.1	1	21	218	238	218	239	0.90
3	12	0.00034	0.04	15.1	2.4	1	23	288	310	288	310	0.96
4	12	2.3e-06	0.00026	22.0	1.1	2	23	331	352	331	352	0.98
5	12	0.011	1.3	10.4	0.8	1	23	378	399	378	399	0.90
6	12	0.00058	0.066	14.4	2.8	1	23	405	427	405	427	0.98
7	12	5.8e-05	0.0067	17.5	0.7	1	23	448	470	448	470	0.97
8	12	7.9e-07	9e-05	23.4	0.9	1	23	476	498	476	498	0.96
9	12	0.00013	0.015	16.4	2.1	1	23	504	526	504	526	0.99
10	12	8.6e-07	9.8e-05	23.3	0.8	1	23	532	554	532	554	0.99
11	12	5.1e-06	0.00058	20.9	0.3	1	23	558	580	558	580	0.98
12	12	0.00041	0.047	14.9	0.0	1	23	592	615	592	615	0.96

Sequence Information

Coding Sequence: ATGGCAGATACAGCTTATAGAAACATAAAAATGGAAAATGGTTTGCATGAAGATGAATATACTGATGCCCTGTCAGCAAACAACTTGGCAGAACATGTTGAATATTTTGAATATGAAGATAATATTGGCACTGGTTATGAACATGAATCATTGATTGAATATATTGAAGAAGATGATGTACAAAATGGTGATTATGTCGAAAACGAAACTCTGGAGGAGCATGTGAAAACACACACTTTATCTATAAAGCACTTGCAGTTCGATGGTCAATCTCAGGAAATATATCGTTGCTTAGAGTGTGCCATAGATTTTGTTACTCTCGAAGACTTTACAAAAGTACATCAAGAAATGCAGAAAAAATTATCTAATAAAGCTTCAACAAATAGTACTAACGATACACTTCAAAACGAACAAGTCAAGGAAGAGCAAATTATTCAAAATTCAAACGGCAGTTGGCTGATTATAAAAGAAGAGCAGATTATTGTAGATGAAAATGAAACTAAAGATTTGGATGATTACTTAGAAACGAGTGAGGATATCATTGAACATACGAATTTTGACAAGGAAAATAATGATATCGCCACCGATACCTTTTTACATGTTAAAGAAGAAAAACAATCAATCACCGACGAAGAAGATGATGGGGAGAAATATTTTTGTTGTGATTGCCAACTGGTATTCAGTGATTTAGAAAAAGCTGAACAACATGTTTGTAGCGCCATAAATACTAGCACAGTTAAGCAGGAAGATGCAGATAACGTTGTAGAGCAAGAAGAATATGACAATGATATACGGTTATATCTTGAAGAGCAGAAGCAAGCATTGGACACATCGAAAAAAAGCCAAAGCAAGGGAGTACAACATCATTGTGCCGAATGTGATAAGACATTTAATTCTCTGCAAGGTTTACAAATACATAACCGTATTCACAAAACAAAAGAAATTAAAACACAGAATGATTCGTTTAGTGTAGTAGAATTGAAAAAACCAACATGTCCGATTTGCAATACTAATTTCAGTTCATATAAAAATCTTAAGTTACACATGAAAATTCATGATGCACAGCAATTGAGATCAATAGAGCAAGCATTGCCGGCTGGCGCCAAAACGCAATATAAGGATATGAATAAATTCTTCTGCGAGATATGCAATAAGAGTTTTGAACAGAATCTACTTGGTATACATAAGAACATGCATCAACAATCCACGGAGTTTAATTGTGGTATCTGCAATCGTCACTTTGAAAATAAAACGAGCTATGACATGCATATGCAAATGCATGCTGACAAACCCGCGAAACCACGTAAACAACAAATCAAGCAAACGGATAGTAGCGGTCGATTTGCTTGTCAATACTGTGGTCGAACGTTCCAGCGGCCGTATGAGAAAGTGCGGCATGAGCGTGTACACACTGGTGAAAAACCACACGCCTGCGAAGTGTGCGGCAAAACTTTTCGCGTTTCTTATTCACTGATACTACACCTGCGCACGCACACTGATATACGACCATACGTATGCGCCACTTGCAATAAACGTTTCAAGTCGCAGCCTGTTTATGCTCATCATCTACGCACTCACGATGCGGAACGTGCATACAAATGTGAAGTTTGTTCAAAATCGTTTCGAACTTCTGTGCAGCTTTCGGCGCATAGGAATATACATTCGAAACCTTACAATTGCCCAGTATGTAATCGTCCATTTGCTTCATTGTATTCGGTGAAAATACACATGAAAACACACAATAAACTTAATCGTTCCGGTGATACTACCAAATACAGTTGTTATGTTTGTGGTGCGGAATATGCGCGAGTTTCTGCATTACGAATACATATGAAGGATTTACATCTTATCGATTTTGATACGAACCGTTCGTTGGATTTAGATGATCTAATATCGGCAGAGGATCAAAACTCTCAATCTCATAACGACATAGATGGCAACGAAGATGAGCAAGAAGTTGATAATGAGGCTGCCGTTTTGATAGCAGCGGCTGCAGAAGCCGATTGCGCAGCCTATATAGAAGCTGCGACAGCGCATACGCCTGATCACACATCTACAGGACCAGAAAGCATGAGCCTTCACTCACAAGTCAATCAACCATACGAAGTTACGCTGCAAAATGAAGAGTTAATTGTGGACAATTACCAAACTGAAGAGATTGTAACCGACTGGTTATCAAAATAA
Protein Sequence: MADTAYRNIKMENGLHEDEYTDALSANNLAEHVEYFEYEDNIGTGYEHESLIEYIEEDDVQNGDYVENETLEEHVKTHTLSIKHLQFDGQSQEIYRCLECAIDFVTLEDFTKVHQEMQKKLSNKASTNSTNDTLQNEQVKEEQIIQNSNGSWLIIKEEQIIVDENETKDLDDYLETSEDIIEHTNFDKENNDIATDTFLHVKEEKQSITDEEDDGEKYFCCDCQLVFSDLEKAEQHVCSAINTSTVKQEDADNVVEQEEYDNDIRLYLEEQKQALDTSKKSQSKGVQHHCAECDKTFNSLQGLQIHNRIHKTKEIKTQNDSFSVVELKKPTCPICNTNFSSYKNLKLHMKIHDAQQLRSIEQALPAGAKTQYKDMNKFFCEICNKSFEQNLLGIHKNMHQQSTEFNCGICNRHFENKTSYDMHMQMHADKPAKPRKQQIKQTDSSGRFACQYCGRTFQRPYEKVRHERVHTGEKPHACEVCGKTFRVSYSLILHLRTHTDIRPYVCATCNKRFKSQPVYAHHLRTHDAERAYKCEVCSKSFRTSVQLSAHRNIHSKPYNCPVCNRPFASLYSVKIHMKTHNKLNRSGDTTKYSCYVCGAEYARVSALRIHMKDLHLIDFDTNRSLDLDDLISAEDQNSQSHNDIDGNEDEQEVDNEAAVLIAAAAEADCAAYIEAATAHTPDHTSTGPESMSLHSQVNQPYEVTLQNEELIVDNYQTEEIVTDWLSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00192235;
90% Identity: iTF_00190817; iTF_00191502; iTF_00193735;
80% Identity: -