Basic Information

Insect: Zeugodacus tau
Gene Symbol: -
Assembly: GCA_031772095.1
Location: CM062652.1:56986391-56989079[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 3.1 3.1e+02 2.8 0.2 1 18 93 110 93 110 0.90

2 12 0.47 46 5.4 1.5 1 21 217 237 217 238 0.89

3 12 0.00014 0.014 16.5 1.2 1 23 287 309 287 309 0.98

4 12 2.2e-06 0.00022 22.1 0.7 2 23 330 351 330 351 0.98

5 12 0.012 1.2 10.4 0.8 1 23 377 398 377 398 0.90

6 12 0.00045 0.045 14.9 2.7 1 23 404 426 404 426 0.98

7 12 0.0002 0.019 16.0 0.8 1 23 453 475 453 475 0.97

8 12 6.8e-07 6.7e-05 23.8 1.4 1 23 481 503 481 503 0.96

9 12 0.00015 0.015 16.4 2.1 1 23 509 531 509 531 0.99

10 12 1.9e-06 0.00018 22.4 1.3 1 23 537 559 537 559 0.99

11 12 5.7e-06 0.00056 20.9 0.3 1 23 563 585 563 585 0.98

12 12 0.00084 0.083 14.0 0.3 1 23 597 620 597 620 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	3.1	3.1e+02	2.8	0.2	1	18	93	110	93	110	0.90
2	12	0.47	46	5.4	1.5	1	21	217	237	217	238	0.89
3	12	0.00014	0.014	16.5	1.2	1	23	287	309	287	309	0.98
4	12	2.2e-06	0.00022	22.1	0.7	2	23	330	351	330	351	0.98
5	12	0.012	1.2	10.4	0.8	1	23	377	398	377	398	0.90
6	12	0.00045	0.045	14.9	2.7	1	23	404	426	404	426	0.98
7	12	0.0002	0.019	16.0	0.8	1	23	453	475	453	475	0.97
8	12	6.8e-07	6.7e-05	23.8	1.4	1	23	481	503	481	503	0.96
9	12	0.00015	0.015	16.4	2.1	1	23	509	531	509	531	0.99
10	12	1.9e-06	0.00018	22.4	1.3	1	23	537	559	537	559	0.99
11	12	5.7e-06	0.00056	20.9	0.3	1	23	563	585	563	585	0.98
12	12	0.00084	0.083	14.0	0.3	1	23	597	620	597	620	0.95

Sequence Information

Coding Sequence: ATGGCAGcttataataacattaaaatggaaaatggtatACAAGACGATGAATATACTGGTGACATGTCGGTGGACAACTTGACTGGAACTGTCGAATACTTTGAATATGAAGATAATATTGGTACCAATTATGAGAACGAATCATTGATTGAATATGTTGAAGAAGATGATGACCAAAATAGTGATTTTGTTGAAAAAGAAACCCTGGAGGATCAGTTGAAAACACACACTTTATCAATAAAGCACATGCAGATCGATGGTCAACCTCAAGAAATATATCGTTGTTTGGAATGTGCTACAGATTTTGTAACACTCGAGGACTTTACTAAAGTGCATAAAGAAATGCAGAAGAAACTAAGTAATAAAGCTTTGACTAATGTTAGTATTAATgttcaacaacaaaatgagCAAATAAACGACGAGCAAACCATACAAAATTCGGGCGATAGTTGGATGATTATAAAAGAAGAGCAGATTATTGCAGATGAAAACGAAGCGGAAGCTTTTGAAGATTTCATAGAAACCAGTGAGAATCTAATTGATGATACGAATTTTGACAAGGAAAATGAAGATGCCGATACTGATATGCTTTTACAAGTTAAAGAGGAAAAGCAATCTATCACCGATGAAGAAGATGatggagaaaaatatttttgctgtgATTGCCAATTGGTATTTAGTGATATAGAGAGTGCGGAGCAACATGTTTGTAGCGCCATAAATACTAGTACTGCCACACCAGAAGATTCAGATAAAGGTGCAGATCATGAAGAATATGAAAACAACTTGCAATTATATCTTGAAGAGCAGCATAAATCCTTACATACTACAAAGAAAAATGAAAGCACGGAAGTGCAATATCATTGTGCCGAATGTGATAAGAGATTTAATTCTCTACAAGGCTTACAAATACATAACCGCATTCACAAAACAAAGGAGATTAAGACACCAGATGATCCACTCGATGTGATAGAATTGAAAAAACCAACATGTCCcatttgtaatactattttcagTTCGTATAAAAATCTGAAgtTACACATGAAAATCCATGATGCACAACAGTTGCGTACAATTGAGCAAGCATTACCGGCTGGTGCCAAAACACAATATAAGGATATGAATAAATTCTTCTGTGAGATATGTAATAAGAGTTTTGAACAAAATCTACTTGGTATACACAAGAACATGCACCAACAGTCGGCGGAGTATAATTGTGGCATTTGCAATCGgcactttgaaaataaaacaagcTATGACatgcatatgcaaatgcatGCTGACAAGCCAGTGAAACCGCGTaaacaacaaatcaaacaaTCGGTTGTTAATGGCGTTGATAAGCCCGGTGGACGGTTTGCCTGTCAATATTGTGGCCGCACGTTCCAGCGTCCGTTTGAAAAAGTGCGCCATGAACGTGTGCATACCGGCGAGAAACCACACGCTTGCGAAGTGTGTGGCAAAACGTTTCGTGTATCTTATTCGCTGACACTACACCTGCGTACGCACACTGATATACGCCCATATGTATGTGCCACTTGCAATAAACGTTTCAAATCGCAGCCTGTTTATGCTCATCATCTACGTACACATGAAGCGGAACGTGCATACAAATGCGAAACTTGTTCAAAATCATTTCGGACCTCGGTACAACTTTCGGCGCATAGGAATATACATTCTAAACCGTATAATTGTCCAGTGTGTAATCGTCCGTTTGCCTCATTGTATTCTGTGAAAATACACATGAAAACGCACAATAAGCTGAATCGTGCCGGTGACACGACTAAATACTGTTGCTATGTGTGTGGCGCGGAATATGCGCGAGTTTCTGCGTTACGTATTCATATGAAGGATTTACATCTGATCGATTTCGATACGAACCAATCGTTGGAATTAGATGATATGATATCGGCAGAGGATCAAACCTCGCAATCTCAACACGACACAGATGGCAATGAAGATGAACAAGAAGTGGACCATGAGGCGGCCGTATTGATAGCAGCGGCTGCGGAAGCCGATTGTGCCGCTTATATAGAAGCCGCGACAGCTGATCCTACAACCGCCGAAACAGAAGCCTTGACACTTCACTCGCCGATTAATCCAACGTACGAGGTGACGCTGCAAAATGAAGAGttgatTGTAGACAATTACCAGACTGAAGAGATTGTAACCGATTGGTTAACTAAGTAA
Protein Sequence: MAAYNNIKMENGIQDDEYTGDMSVDNLTGTVEYFEYEDNIGTNYENESLIEYVEEDDDQNSDFVEKETLEDQLKTHTLSIKHMQIDGQPQEIYRCLECATDFVTLEDFTKVHKEMQKKLSNKALTNVSINVQQQNEQINDEQTIQNSGDSWMIIKEEQIIADENEAEAFEDFIETSENLIDDTNFDKENEDADTDMLLQVKEEKQSITDEEDDGEKYFCCDCQLVFSDIESAEQHVCSAINTSTATPEDSDKGADHEEYENNLQLYLEEQHKSLHTTKKNESTEVQYHCAECDKRFNSLQGLQIHNRIHKTKEIKTPDDPLDVIELKKPTCPICNTIFSSYKNLKLHMKIHDAQQLRTIEQALPAGAKTQYKDMNKFFCEICNKSFEQNLLGIHKNMHQQSAEYNCGICNRHFENKTSYDMHMQMHADKPVKPRKQQIKQSVVNGVDKPGGRFACQYCGRTFQRPFEKVRHERVHTGEKPHACEVCGKTFRVSYSLTLHLRTHTDIRPYVCATCNKRFKSQPVYAHHLRTHEAERAYKCETCSKSFRTSVQLSAHRNIHSKPYNCPVCNRPFASLYSVKIHMKTHNKLNRAGDTTKYCCYVCGAEYARVSALRIHMKDLHLIDFDTNQSLELDDMISAEDQTSQSQHDTDGNEDEQEVDHEAAVLIAAAAEADCAAYIEAATADPTTAETEALTLHSPINPTYEVTLQNEELIVDNYQTEEIVTDWLTK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00192235;
90% Identity: iTF_01563097;
80% Identity: -