Basic Information

Insect: Bactrocera latifrons
Gene Symbol: -
Assembly: GCA_001853355.1
Location: NW:1088221-1094190[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 28 0.21 12 6.1 2.6 1 23 257 279 257 279 0.96

2 28 0.0034 0.19 11.8 2.2 1 23 285 307 285 307 0.98

3 28 0.018 1 9.5 2.4 1 23 382 404 382 404 0.98

4 28 0.57 32 4.8 5.6 1 23 410 432 410 432 0.95

5 28 0.0081 0.45 10.6 0.2 2 23 463 484 462 484 0.97

6 28 0.05 2.8 8.1 2.3 1 23 556 579 556 579 0.96

7 28 1 57 4.0 1.2 1 22 586 607 586 607 0.89

8 28 2.5e-06 0.00014 21.6 2.0 2 23 657 678 656 678 0.97

9 28 0.00044 0.024 14.6 0.5 1 23 685 708 685 708 0.96

10 28 9.5 5.3e+02 0.9 2.6 2 20 716 734 715 737 0.93

11 28 0.014 0.77 9.8 1.5 1 23 818 841 818 841 0.96

12 28 0.047 2.6 8.2 0.4 1 23 880 903 880 903 0.96

13 28 0.00023 0.013 15.5 0.4 2 23 919 940 918 940 0.97

14 28 2.9e-05 0.0016 18.3 4.2 1 23 947 969 947 969 0.98

15 28 6.5e-05 0.0036 17.2 1.0 1 23 1124 1147 1124 1147 0.96

16 28 0.0018 0.1 12.6 1.1 1 23 1184 1207 1184 1207 0.98

17 28 7.8e-06 0.00044 20.1 1.2 1 23 1222 1244 1222 1244 0.98

18 28 3e-05 0.0017 18.2 1.3 1 23 1251 1273 1251 1273 0.98

19 28 0.018 1 9.5 0.3 2 21 1300 1319 1299 1320 0.94

20 28 0.00065 0.036 14.0 2.4 1 23 1364 1387 1364 1387 0.97

21 28 3.5 2e+02 2.3 0.6 2 22 1395 1415 1394 1415 0.94

22 28 0.068 3.8 7.7 1.8 1 23 1424 1447 1424 1447 0.96

23 28 0.00013 0.0072 16.2 3.7 1 23 1475 1498 1475 1498 0.97

24 28 1.2e-05 0.00066 19.5 0.2 2 23 1530 1551 1529 1551 0.95

25 28 5.2e-05 0.0029 17.5 2.3 1 23 1557 1579 1557 1579 0.99

26 28 3e-06 0.00017 21.4 6.4 1 23 1585 1607 1585 1607 0.98

27 28 4.8e-06 0.00027 20.7 1.5 1 23 1613 1635 1613 1635 0.99

28 28 0.005 0.28 11.2 0.1 1 21 1641 1661 1641 1665 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	28	0.21	12	6.1	2.6	1	23	257	279	257	279	0.96
2	28	0.0034	0.19	11.8	2.2	1	23	285	307	285	307	0.98
3	28	0.018	1	9.5	2.4	1	23	382	404	382	404	0.98
4	28	0.57	32	4.8	5.6	1	23	410	432	410	432	0.95
5	28	0.0081	0.45	10.6	0.2	2	23	463	484	462	484	0.97
6	28	0.05	2.8	8.1	2.3	1	23	556	579	556	579	0.96
7	28	1	57	4.0	1.2	1	22	586	607	586	607	0.89
8	28	2.5e-06	0.00014	21.6	2.0	2	23	657	678	656	678	0.97
9	28	0.00044	0.024	14.6	0.5	1	23	685	708	685	708	0.96
10	28	9.5	5.3e+02	0.9	2.6	2	20	716	734	715	737	0.93
11	28	0.014	0.77	9.8	1.5	1	23	818	841	818	841	0.96
12	28	0.047	2.6	8.2	0.4	1	23	880	903	880	903	0.96
13	28	0.00023	0.013	15.5	0.4	2	23	919	940	918	940	0.97
14	28	2.9e-05	0.0016	18.3	4.2	1	23	947	969	947	969	0.98
15	28	6.5e-05	0.0036	17.2	1.0	1	23	1124	1147	1124	1147	0.96
16	28	0.0018	0.1	12.6	1.1	1	23	1184	1207	1184	1207	0.98
17	28	7.8e-06	0.00044	20.1	1.2	1	23	1222	1244	1222	1244	0.98
18	28	3e-05	0.0017	18.2	1.3	1	23	1251	1273	1251	1273	0.98
19	28	0.018	1	9.5	0.3	2	21	1300	1319	1299	1320	0.94
20	28	0.00065	0.036	14.0	2.4	1	23	1364	1387	1364	1387	0.97
21	28	3.5	2e+02	2.3	0.6	2	22	1395	1415	1394	1415	0.94
22	28	0.068	3.8	7.7	1.8	1	23	1424	1447	1424	1447	0.96
23	28	0.00013	0.0072	16.2	3.7	1	23	1475	1498	1475	1498	0.97
24	28	1.2e-05	0.00066	19.5	0.2	2	23	1530	1551	1529	1551	0.95
25	28	5.2e-05	0.0029	17.5	2.3	1	23	1557	1579	1557	1579	0.99
26	28	3e-06	0.00017	21.4	6.4	1	23	1585	1607	1585	1607	0.98
27	28	4.8e-06	0.00027	20.7	1.5	1	23	1613	1635	1613	1635	0.99
28	28	0.005	0.28	11.2	0.1	1	21	1641	1661	1641	1665	0.91

Sequence Information

Coding Sequence: atggTTTCTTATCAATGTCGAACTTGTTGTGAGGATAATGTTGGCAGTTTCTATTCTCTTGAAGAACTGTTGGATTACGATCGTCACCCTAAAAAAACTGTAGCAGATTTTCTATGGGACATAGCTAAAATTAATAATAACACTGAAGTTGCTAAACGTTTACCACAGGATATTTGTGGAGAGTGTTCACGTAAGCTTAAAAATACGTATTCATTTGTACTTCAAGCGcaagcagcaaataaaaaattacaagctACTTTGTACatcgaaaatgttaaaacttATACTACTAAGGAACTAATAGATAAGCAGAATGACTGTTTATTGGAATCGCCCATTGATATACCTATTCGacaaacagaaattaaaaaggAAGTCACATTCGAGCAAGGAGATGAAAAAAGCGAGCAAGGAGATGTAGGCAATGAAGAATTCGTTAACATCGGTAAAAATGAATGTGAAATCGTGAAAACTGTGGATGAAATAGTACAGTTTGTAAAAGACGAAGTGGTCGCGGATGTAAATGCAGGAGAAAATGATTCCGATAGCATTAGTACagTAGAAGGTGGCGTAAACACAGATCCCATAACCACAGTGGAAACTAGTTGGTACAAAGAAAAAGACGATAATGGTGGAATAGATAATCTGATTAATCTGGATAATAACTTGAGTGATGATAATTCAGACACCCCATTATTGAAGCGACGTCGGCTTGGGCAGTTATCCAGTCAGACCTTCGAATGTACATTTCGTGAGGATGATGGTCGGTATCATTGTAATAAATGTACCAAAGATTTTGCATGGAAGAAAGACGCGAAACGGCATTTGCTGTTACATTCCAACATCTATCCATACAAATGCACTGAATGCAGCCGTCTCTTCCAGAGAAAGGATAAACTTGATAAACATAAGGAAGTACATTCCAAACGAGagcaaagaaattcaaaaaaaaggaAAGTTCATTCCAAAAGAGATTCCGAAATTGAACAAATGGTATTAGATTCAAATTTACAACCCGATATAAATGATAGTGAAACTAGTGATGATGACAGTGATCAAGATaaacttctaacaaaacaacaaagaagTAGGCGGTCATCTACCAAAAAACCGGAATTCACCTATTGCAATGACGATTCTCGGTATCATTGTAACAGATGTAATAAAGATTTTGCTTGGAAAAAAGATGTAGAACGTCACATAAAAAGTCATTTCGGCATTTTTCCATTCGAATGCATCAAATGCCATCATCGCTTTCAGCGAAAAGATAAGTTTGCTGAACACTTAAAAATTCATGCAAAACGTGAGAAAAGCGTTCGTCGCCCTAGACCAATACAGTGGAATTTTGCTGAACATCTTTATACTGAGCAGCGATTTCTTTCTGTAGAGTGCAAACTTTGCACTGAGGTTATACCAAACATTAAAACTCTACGTCAACATATGCAAACACATAATGAGGTCCATACGTTACATTTAGACGCTGAAAGTGACGTGATTAAAGAGTTATTCCCCAATTTTAATGGTGACATAATAGAAATTAAGGAAAACATTTGCAAAGACATAAGGCATAAACTGTTTGCGAAGTATTACGCAATTGTTAATGCGTATGGCTATGAAATGGCTTTGAGTGATTCTGATTCTGAAAATGATTCAGTTGGTGAGAAGTACGAATGTGAATTATGTCACGTAAAGTTGGGACGAAAATATCAGCTATTTCAACATTCAAAGTCAGAGCACTCCCAAGACAAATTTCCCCACAAATGCAACGTTTGCAAGTTGGAGTTTGTCAACACAACAATATTTGAGAAACATTCACGTACACAATGCAGAAATAAGGATCGAAAATATCAATGTCTCAAATGTCCGGGGAAATTTGTTTGGGTACAGAATCTTCAGGGCCATAAATGCTCTAATCGGCTAAATGTTTATGTACCGAAGCGTCCAGAACAGCGGAAAAGAAATTTATTGCGGTGTaatttttgtgataaaactTTTCGTTATGCCACAGACTTGAAACGACATCAAGAGACACATAACTTAAAAAGTCAGTCTCATGTGTGCCCCATCTGCAGCCAACCCTTTTTGAAAGCAGAAAATTTGCGTCAACATATGCGACAGGATCACGAACAAATTAAACGACGCATCCAATGTTGCTTGTGTGGAGAGAAACAGAAGACTCTTGCTGAGCTTCGCGTTCATTTATCATGTCATTCGGATGGGTGGACTGGCATCAGATATACAGAAGGTCAATACTTTAAGATTCATTGGCCGCAAGGTTGTCAAGGAAAAGAAGGAGAGGTCGAACGTAGCATTATAATAGATTTTGCTGgacaaaatttaacaaactACTATTCGGCTGTTGATGAGAGTGGCAATGAGTTGGATTTGTATGATTCAGAGAGTGATTTTGAATCGGATAAAAAGCAAAACGGAAATCCATTATCAATACCCTATACGTGTGATTTGTGTGGTGAAGTTTTCTTCAGGAGAACACGTATCCTCCAACATCAACATAGTGCACATGCTGATGGGGAAGACTCCTTCCCTCATGCTTGTTGTCGATGTGAGAAACGTTTCGTTTGCTTGGCCTTATTAGAACAACACTATAAACGCGATTGTGGTAATATATATAAGAGATTCGATTGTCAACGATGTTCAGCACGATTTGTGTGGGAGGCAAACTTACAACAGCATATGCAACGGCAACACATTGATCCAGAGCAACAAATAAGTCGACAACTTGCTAATAAACTACAATGTGATCAATGTAATAAAGTGTTTATTTGGCCAAAGGATCTGACGCGACACAAACGGATACACATGCCCGATGATGAGAAGTTTGAATGTCTGTATTGTGAAAGAAAATTCTATCGAAAGGATCACTTGCAGACTCACTTAAAAGTTCATGGTTCCGGAGGGAGCATGGCTACGACAACTGCGGCTGCCAGCAAGCGTGAGCTTATTCGCAAAGTAAATGCTGTCGATCCGTATCTCTGCCGGCCTAACGGCTGCAAATGTGTTCAATGCAAAATATGCTTATCCAAGCATACAAAAATTGCAGATTTGCGAACACATATCTTAGAACATCGGACAAATATGTCATTGTCACAACATGTAACATCGAATTCagaaatttctttacttttttatccAGATGAAGCGCCTATGTCGAGGGATCTACTAATGGCGCGCATGATGGCTGATATTACAGCTGGCCAGATGGATCGATTTTATTCAATCACCAATGAATTGGGCCATGAGATAAGCATTAGCGGCTCCGACACCGACGACACTGATTCAGAGTCCGAACCTGATGAAGTATTGTATTTTGCTATGGGGCAAAATATTCGGCATCCAAGGCGTTCAATATATAGTTGCGATTTGTGTACCATCACGTTCACGCGTAAGTACAAACTTTTTGCTCATCAAGCGAGCGATCATAATTGGGATGACGCTCCCCATGTATGTCAACATTGTCAGGCGCGTTTCTTGTGCGAGAAGCTGCTGCAGTCGCATTATCGACACCAGTGCAAGAATTTACTGAAACGTTACGTGTGTCGCAAATGTCCTCAACGATTTATGTGGAAGGAGAATCTGAAAATGCATTTACGCACAATGCACCCTGACAGCGAAGAGGTTAAGAAGtgTTTTGCACCTAGTTCATATGATTGCGAGGAGTGCTCCAGAAGTTTTCAGATGCAGAAGGATCTCACGCGCCACATGATGACACATCGAGTCGATGCTACTGTATTTCCATGTTTATGGTGTCCACGTAAATTTTACCGAAGAAGTAATTTATACTTGCACATCAAGAGGCATGGCATAACATCACATCAGTTGAGTGCTGCCGCTTCTCACATTACTGCTTGTAAAGGGCCGAATGGCATAAAACAGATTTATTGTCGTGTTtgtaacataaaatttcaaaaattatctgcaCTACGCACTCATCTGCGGCAAGAGACGTCAGCAGTGCCATCGTCGCACCATAATTACCATTCACAGCacaattattcaataatgaatgagTTGGGCTACGAGTTGGACATTGACGATTCAGAGACAGATGAGGACGATAATGCTAAAACATATAAATGTCAAATGTGCGGATTAGTTTGTAAAAGACGATATGAAATGAGTCAGCATCAGTTGTCAGTGCATAAGCACGAGCATATAACACTTAAATGTGATAAGTGTGTATTTAGAACCGTCACAAGTgaTATTATGGAACACCACATGCGCACACAATGTAATAATAGTGAAAAATTGCACCAATGCACGCActgttcatataaatttatgtggCCTGAGAATTTGGACGTGCACATTAAGCTGGTTCATCCAGAAGAAAGACAAAAATCTGTTGAAGTTGCAGAAGCTGTTGTGGCAACCTCCCGCAGTGAGCCTGTCCCGCTTCAAGAATTCCATTGCGATAAATGTGATAGACGTTATAATCGCAAAGATCGCCTGATTgcacatatgaaaaaaatgcatcCGGTAGACGGTGTTGTCCCCAGCAGCAGTATGAATCTTGGCGGTGTCAATATATCCAACGATGAAAAAAAGCAACCTAAAGAAAAGAAGTTTCTTTGtgcattttgtgggcgtgctGTGAGCTCCTCATCTAACTTGATTGTTCACATGCGACGCCACACAGGCGAGAAACCATTTCAGTGTGAATTTTGTGATAAAGCATTTCCACGCTCATCTGATTTGGCATGCCATCGGCGTACACATACGGGTGAAAAACCCCATCGTTGCACAGTTTGTGACAAGTCGTTTTCACGCTCCTATAAGTTGCATACCCACATGCGTATACATTCTGGCGAAAGGCCGTACAAGTGTTCATTTTGCGAGAAAAGCTTTACACAATCTAATGATCTTGCTTTGCATGTACGTCGCCATACTGGAGAACGTCCATATGTGTGCAATATTTGCAATGAAGGTTTTATTCAAGGAACTGCATTAAAAAATCATCGCACATTGCGCGGACATTTTGAAGAAGAGGAAATTAAATACGTTTCTGATGTAAAGAAACAACCGAGCAGCGTATTGCAATTGGATGAGCAGGGTAATAGCttaatacttttgtaa
Protein Sequence: MVSYQCRTCCEDNVGSFYSLEELLDYDRHPKKTVADFLWDIAKINNNTEVAKRLPQDICGECSRKLKNTYSFVLQAQAANKKLQATLYIENVKTYTTKELIDKQNDCLLESPIDIPIRQTEIKKEVTFEQGDEKSEQGDVGNEEFVNIGKNECEIVKTVDEIVQFVKDEVVADVNAGENDSDSISTVEGGVNTDPITTVETSWYKEKDDNGGIDNLINLDNNLSDDNSDTPLLKRRRLGQLSSQTFECTFREDDGRYHCNKCTKDFAWKKDAKRHLLLHSNIYPYKCTECSRLFQRKDKLDKHKEVHSKREQRNSKKRKVHSKRDSEIEQMVLDSNLQPDINDSETSDDDSDQDKLLTKQQRSRRSSTKKPEFTYCNDDSRYHCNRCNKDFAWKKDVERHIKSHFGIFPFECIKCHHRFQRKDKFAEHLKIHAKREKSVRRPRPIQWNFAEHLYTEQRFLSVECKLCTEVIPNIKTLRQHMQTHNEVHTLHLDAESDVIKELFPNFNGDIIEIKENICKDIRHKLFAKYYAIVNAYGYEMALSDSDSENDSVGEKYECELCHVKLGRKYQLFQHSKSEHSQDKFPHKCNVCKLEFVNTTIFEKHSRTQCRNKDRKYQCLKCPGKFVWVQNLQGHKCSNRLNVYVPKRPEQRKRNLLRCNFCDKTFRYATDLKRHQETHNLKSQSHVCPICSQPFLKAENLRQHMRQDHEQIKRRIQCCLCGEKQKTLAELRVHLSCHSDGWTGIRYTEGQYFKIHWPQGCQGKEGEVERSIIIDFAGQNLTNYYSAVDESGNELDLYDSESDFESDKKQNGNPLSIPYTCDLCGEVFFRRTRILQHQHSAHADGEDSFPHACCRCEKRFVCLALLEQHYKRDCGNIYKRFDCQRCSARFVWEANLQQHMQRQHIDPEQQISRQLANKLQCDQCNKVFIWPKDLTRHKRIHMPDDEKFECLYCERKFYRKDHLQTHLKVHGSGGSMATTTAAASKRELIRKVNAVDPYLCRPNGCKCVQCKICLSKHTKIADLRTHILEHRTNMSLSQHVTSNSEISLLFYPDEAPMSRDLLMARMMADITAGQMDRFYSITNELGHEISISGSDTDDTDSESEPDEVLYFAMGQNIRHPRRSIYSCDLCTITFTRKYKLFAHQASDHNWDDAPHVCQHCQARFLCEKLLQSHYRHQCKNLLKRYVCRKCPQRFMWKENLKMHLRTMHPDSEEVKKCFAPSSYDCEECSRSFQMQKDLTRHMMTHRVDATVFPCLWCPRKFYRRSNLYLHIKRHGITSHQLSAAASHITACKGPNGIKQIYCRVCNIKFQKLSALRTHLRQETSAVPSSHHNYHSQHNYSIMNELGYELDIDDSETDEDDNAKTYKCQMCGLVCKRRYEMSQHQLSVHKHEHITLKCDKCVFRTVTSDIMEHHMRTQCNNSEKLHQCTHCSYKFMWPENLDVHIKLVHPEERQKSVEVAEAVVATSRSEPVPLQEFHCDKCDRRYNRKDRLIAHMKKMHPVDGVVPSSSMNLGGVNISNDEKKQPKEKKFLCAFCGRAVSSSSNLIVHMRRHTGEKPFQCEFCDKAFPRSSDLACHRRTHTGEKPHRCTVCDKSFSRSYKLHTHMRIHSGERPYKCSFCEKSFTQSNDLALHVRRHTGERPYVCNICNEGFIQGTALKNHRTLRGHFEEEEIKYVSDVKKQPSSVLQLDEQGNSLILL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00190109; iTF_00192221; iTF_00193725; iTF_01563940; iTF_01563080; iTF_00190806; iTF_00192954;
90% Identity: iTF_00190806; iTF_00192954; iTF_00190109; iTF_00193725;
80% Identity: -