Basic Information

Insect: Zeugodacus cucurbitae
Gene Symbol: -
Assembly: GCA_028554725.2
Location: CM053019.1:3667182-3672726[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 29 0.051 6.7 8.4 2.9 1 23 240 262 240 262 0.96

2 29 0.0013 0.17 13.5 1.8 1 23 268 290 268 290 0.97

3 29 0.023 3.1 9.5 2.4 1 23 365 387 365 387 0.98

4 29 0.74 97 4.8 5.6 1 23 393 415 393 415 0.95

5 29 0.016 2.1 10.0 0.0 2 23 446 467 445 467 0.97

6 29 0.0019 0.25 12.9 2.2 1 23 539 562 539 562 0.96

7 29 0.045 5.9 8.6 1.2 1 22 569 590 569 590 0.95

8 29 6 8e+02 1.9 0.9 1 19 599 617 599 620 0.91

9 29 2.2e-06 0.00028 22.2 1.8 2 23 640 661 639 661 0.97

10 29 0.0021 0.28 12.8 0.4 1 23 668 691 668 691 0.96

11 29 0.0065 0.86 11.2 0.5 2 23 699 720 698 720 0.96

12 29 0.018 2.4 9.9 1.5 1 23 801 824 801 824 0.96

13 29 0.048 6.3 8.5 0.7 1 23 863 886 863 886 0.96

14 29 0.00024 0.031 15.8 0.4 2 23 902 923 901 923 0.97

15 29 1.5e-05 0.002 19.5 4.1 1 23 930 952 930 952 0.98

16 29 0.0031 0.4 12.3 0.5 1 23 1107 1130 1107 1130 0.96

17 29 0.0023 0.31 12.7 1.1 1 23 1167 1190 1167 1190 0.98

18 29 1.4e-05 0.0018 19.6 1.3 1 23 1205 1227 1205 1227 0.97

19 29 3.9e-05 0.0051 18.2 1.3 1 23 1234 1256 1234 1256 0.98

20 29 0.011 1.5 10.5 0.2 2 21 1283 1302 1282 1303 0.94

21 29 0.0024 0.32 12.6 1.7 1 23 1347 1370 1347 1370 0.97

22 29 6.2 8.2e+02 1.9 0.6 2 22 1378 1398 1377 1398 0.93

23 29 0.072 9.4 8.0 1.4 1 23 1407 1430 1407 1430 0.95

24 29 0.0031 0.41 12.3 2.4 1 23 1458 1481 1458 1481 0.97

25 29 2.6e-05 0.0034 18.8 0.2 2 23 1513 1534 1512 1534 0.95

26 29 6.8e-05 0.0089 17.5 2.3 1 23 1540 1562 1540 1562 0.99

27 29 3.9e-06 0.00051 21.4 6.4 1 23 1568 1590 1568 1590 0.98

28 29 6.2e-06 0.00081 20.8 1.5 1 23 1596 1618 1596 1618 0.99

29 29 0.0044 0.58 11.8 0.1 1 21 1624 1644 1624 1648 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	29	0.051	6.7	8.4	2.9	1	23	240	262	240	262	0.96
2	29	0.0013	0.17	13.5	1.8	1	23	268	290	268	290	0.97
3	29	0.023	3.1	9.5	2.4	1	23	365	387	365	387	0.98
4	29	0.74	97	4.8	5.6	1	23	393	415	393	415	0.95
5	29	0.016	2.1	10.0	0.0	2	23	446	467	445	467	0.97
6	29	0.0019	0.25	12.9	2.2	1	23	539	562	539	562	0.96
7	29	0.045	5.9	8.6	1.2	1	22	569	590	569	590	0.95
8	29	6	8e+02	1.9	0.9	1	19	599	617	599	620	0.91
9	29	2.2e-06	0.00028	22.2	1.8	2	23	640	661	639	661	0.97
10	29	0.0021	0.28	12.8	0.4	1	23	668	691	668	691	0.96
11	29	0.0065	0.86	11.2	0.5	2	23	699	720	698	720	0.96
12	29	0.018	2.4	9.9	1.5	1	23	801	824	801	824	0.96
13	29	0.048	6.3	8.5	0.7	1	23	863	886	863	886	0.96
14	29	0.00024	0.031	15.8	0.4	2	23	902	923	901	923	0.97
15	29	1.5e-05	0.002	19.5	4.1	1	23	930	952	930	952	0.98
16	29	0.0031	0.4	12.3	0.5	1	23	1107	1130	1107	1130	0.96
17	29	0.0023	0.31	12.7	1.1	1	23	1167	1190	1167	1190	0.98
18	29	1.4e-05	0.0018	19.6	1.3	1	23	1205	1227	1205	1227	0.97
19	29	3.9e-05	0.0051	18.2	1.3	1	23	1234	1256	1234	1256	0.98
20	29	0.011	1.5	10.5	0.2	2	21	1283	1302	1282	1303	0.94
21	29	0.0024	0.32	12.6	1.7	1	23	1347	1370	1347	1370	0.97
22	29	6.2	8.2e+02	1.9	0.6	2	22	1378	1398	1377	1398	0.93
23	29	0.072	9.4	8.0	1.4	1	23	1407	1430	1407	1430	0.95
24	29	0.0031	0.41	12.3	2.4	1	23	1458	1481	1458	1481	0.97
25	29	2.6e-05	0.0034	18.8	0.2	2	23	1513	1534	1512	1534	0.95
26	29	6.8e-05	0.0089	17.5	2.3	1	23	1540	1562	1540	1562	0.99
27	29	3.9e-06	0.00051	21.4	6.4	1	23	1568	1590	1568	1590	0.98
28	29	6.2e-06	0.00081	20.8	1.5	1	23	1596	1618	1596	1618	0.99
29	29	0.0044	0.58	11.8	0.1	1	21	1624	1644	1624	1648	0.91

Sequence Information

Coding Sequence: atgtcgTCATATCAATGTCGAACGTGTCGCGAGCCTCAAGGTGGTAGTTTCTATTCTCTTGGAGAACTTTTGGATGAGGATCGACATCCTAATAAAACTCTTGCAGATTTCTTATGGGACattgcaaaaattaataATGAGACTGAAGTTGCTAAACGTTTGCCACAGCAAATTTGTGAAGGGTGCTCACACCAGCTTAAAAATGCATATTCATTTGTACTACAGGCACAagcaacaaatgaaaaattacaaGCTAATTTGTACATCGAAAATGTTAAAACTTTTACTGCCACAGTGGTGTCAGATAAGCAGAATGATTGCTTGTTGGAATCACCTATTGATATACCCAGTGaacaaacagaaataaaaaaagaaacagaaTTTAATGACGAACAAGAAACTGTATCCAATGAAGAATTCGTTAACATCAGTAAAAATGAAAGTGGAATTGAAGTAAAAAGAGAAGTTGGCGTAGATTTAAGTGCGGTAGAAAATGATACCGAGAGCATTAATACagAAGACAACATGGTCATAGACCCCATAACCACTGTAAAAACTAACTGGCACAAAGACGCAGATAATGATGGAATAGAACACTTGAGTAATTTGGACAATAGCTTGAGTGAAGACTCAGACACCCCATTATTGAAACGCCGTCGGTCTAGACAGATATCCACGCTGACATTTCAATTTACATTTCGTGACAACGATGGTCGATATCATTGTAATAAATGTTCTAAAAGTTTTGCATGGAAAAAAGACGCAAAACGTCATTTGCTCTTACATTCCGACATCTATCCATACGAATGCACAGAATGCACTCGTCGCTTCCAGCGTAAGGATAAATTTGATAAACATGTGGAAGTACATTCCAAGCGAAACGAAAAGAAATTAACGGAAAAAAGACTTCATTCTAATATAAATACGGAAGATGAACAAATGGAATTTGATTCATGTTTGCAGCTTCATACAACAGTTAGTGAAACTAGTGAGGATGACAGTGACGGAGATGAAATCATAACTAAGCGACTAAGGAGTAGGCGGGCATCTTCAAAAAAACCGGAATTCACTTATTGTAATGACGATGGCCGTTATCACTGCAACAGATGTAATAAAGATTTTGCTTGGAAAAAAGATGTGGAACGTCACATAAAAAGTCATTTCGGCATTTTCCCATTCGAATGCATAAAATGTCATCATCGCTTTCAGCGAAAAGATAAGTTTGCTGAGCATTTAAAGATTCATGCCAAACATGAGAAAAAAGTTCGTCGTCCTCGACCAATACAGTGGAATTTTGCGGAACATCTTTATACCGAGCAGCGTTTCCGTTCGCTAGAGTGTAAGCTCTGCCCTGAGGTTATAGAAAATATTGCCACTCTACGTCAACATATTCAAACACATAATGAGACTCACACATTGCATTTAGATGCTGAAAGTGACGTGATTAAGGAATTATTCCCCAATTTCAATGGTgacgtaattaaaattaaggaaAAGATTTGCAAAGATATTAGAGATAAAGTTTTTGCCAAGTATTACACTATTGTTAATGCATATGGCTATGAAATGGCTTTAAGTGATTCTGATGCAGAACATGATTCGAATGTGGACAAATACAATTGCGAATTATGTAACGAAAAGTTCAGCAGAAAGTATCAGGTATTCCAGCATTCAAAGTCAGAGCATTCACAAGATAAGCTTCCTCACAAATGCAACGTTTGTAAATTGGAGTTTGTCAGCAGAACAATGTTTGAGTTACATTCACGCACACAATGCCGAAATAAGGATAGAAAATATCAATGTCTCAAATGCCCGGGTAAATTTGTTTGGGTACAAAATCTTCAAAGACATAACTGCTCCAACCGgctaaatgtatatgtaccgAAGCGTCCAGAACAGCGCAAAAGAAATTTATTGCAGTGTAATTTTTGTGATAAAACTTTTCGTTATGCTACTGACTTGAAACGACATCAAGAGACGCATAACTTGAAGAGTCAATCCCATGTTTGCCCCATCTGCAGTCAACCATTTTTAAAGGCAGAAAATTTACGTCAACATTTACGGCAGGATCACGAGCAAATTAAACGACGCATTGAATGTTGCTTGTGTGGGGAGAAACTGAAAACACTCGCTGAGCTTCGCGTTCATTTGTTGCGCCATTCGGATGGCTGGAGTGGTATCAGATATACAGAGGGTCAATATTTTAAGGTTCATTGGCCGCACGGTTGTCAAGGAAAAGAGAGTGAGGTCGAACGTAGCATTATTATTGATTTTGCTggtcaaaatttaacaaattattatacGGCTGTTGATGAGAGTGGTAATGAGTTGGATTTGTACGATTCAGAGAGTGATTTTGAAACGGGCAGCAAGCAAGGCGGGAATCCTTTACCCGTATCCTATACGTGTGATCTGTGTGGTGAAGTTTTTTTCAGAAGAACACGCATCCTGCAACATCAACATAGCGCACATGCTGATGAGGAAGCCTCCTTACCTCATGCTTGTAGTCGTTGTGAGAAGCGTTACGTTTGTTTAGGCTTACTGGAACAGCACTATAAACGTGATTGTGGTAATATCTATAAGCGATTCAATTGCCAACGATGCTCAGCCCGATTTGTGTGGGAGGAAAACCTACAACAACATATGCAGCGGCAACACATTGATCCAGAGCAACAAATAAGTCGACAACTTGCTAATAAACTACAATGTGATCAATGCAATAAAGTATTTGTTTGGCCAAAAGATCTGACGCGACACAAACGCATTCACATGCCCGATGATGAGAAGTTTGAATGCCTGTATTGTGAACGAAAATTCTACCGGAAAGATCACCTACAGACACATTTGAGAGTTCATGGTTCCGGTGGCAGCATGGCAACGACAACAGCGGCCGCCACTAAACGCGAGCTTAATCGTAAAGTTAATGCTGTCGACCCGCATCTCTGCAGACCCAACGGTTGCAAATGTGTTCAATGCAAAATCTGTTTGTCTAAGCATACAAAAATTGCTGATTTGCGAACACATATCTTGGAGCATCGAACAAATGTGTCGTTGTCGCAACATGTTACAACAAATTCGGAagtttctttacttttttatcCAGATGAGGCCCCCATGTCCAGGGAGTTACTTATTGCGCGCATGATGGCTGATATTACAGCCGGCCAACTGGATCGATTCTACTCAATTACTAATGAATTGGGCCACGAGATAAGCATAAGCGGCTCCGACACTGATGATACTGATTCAGATTCCGAACCTGACGAAGTATTGTATCATGCAACTGGGGAAAATATTCGGCACCCAAGGCGTTCAATATACAATTGCGATTTGTGCAGTATCACGGTAACGCGTAAATACAAACTGTTTGCTCATCAAGCGAGTGATCATAATTGGGATGATGCTCCACATGTATGTCAACATTGCGGGGCGCGCTTTTTGTGTGAGAAGTTATTGCAGTCTCATTACCGACACCAATGCAAAAACTTATTGAAACGGTACGTGTGTCGTAAATGTCCTCAACGATTTATGTGGAAAGAAAACCTCAAAATGCATTTACGTACTATGCACCCGGACAGCGAAGAGGTTAAGAAGtgttttGCACCCAGTTCTTTTGATTGCGAAGAGTGCTCTAGAAGTTTCCAGATGCAGAAGGATCTAACACGCCACATGATGACACATCGGGTCGATGCCACTGTGTTTCCATGTCTATGGTGTCCACGTAAATTCTACCGAAGAAGtaatttgtatttgcatatCAAGAGACATGGTATAACTTCACATCAGTTGAGTGCTGCAGCTTCTCACATCACTGCCAGTAAAGGACCGAATGGTATTAAACAGATTTATTGCCGGGTTTGTAACATAAAATTCCAAAGTTTGTCGGCTCTACGCACTCATCTGCGTCAAGAGACAACAGAAGTGCTTTCTTCGCACCACAGCTACAATTCACCACACAATTATTCAATTATGAATGAGTTGGGGTACGAGCTGAGCCTTGATGATTCAGAGACAGACGAAGGCGGCAATGCTAAAACATATAAGTGTCAAATGTGTGGATTAGTTTGCAAAAGGCGTTATGAAATGGGTCAGCATCAGTTGTCAGTGCATAAGCATGAACATATCACACTCAAGTGTGATAAGTGTGTGTTTAGAACAGTTTCAAGTgaCATTATGGAACATCATATGCGCACACaatgtaataataatgaaaaactaCATCCGTGCACACACtgttcatataaatttatgtggCCTGAAAATTTGGACGTGCACATGAAGCTGGTTCATCcagaagaaatacaaaaaactgtTGAAGCTGCAGAAGATGTTGCGGTGTCCTCCCGCAGTGAGCCCGTACCTCTTCAAGAATTCCATTGCGATAAATGTGATAGCCGTTACAATCGTAAAGATCGCTTAATTGCACATATAAAAAAGATACATCCGCTAGTTGGTGATGATGCCAGTTGCAGTACGAATGTTGTCAAAGTTAACTTATCCAAAGATGAAAAAAAGCAGCCGAAAGAGAAGAAGTTTCTTTGTGCATTTTGTGGGCGCGCTGTAAGTtcttcttcaaacttggttgttCATATGCGACGCCATACAGGCGAGAAGCCATTTCAGTGTGAATTTTGTGATAAAGCCTTCCCACGCTCATCTGATTTGGCCTGCCATCGGCGTACTCATACGGGAGAAAAGCCGCATCGTTGCACAGTATGTGACAAATCGTTTTCGCGCTCGTATAAGTTACATACGCACATGCGTATACATTCAGGTGAAAGACCATATAAGTGTTCGTTCTGCGAGAAGAGTTTCACCCAATCCAATGATCTTGCTTTGCATGTACGCCGCCATACTGGTGAACGTCCGTATGTGTGCAATATTTGCGATGAGGGTTTTATTCAAGGAACTGCGTTAAAGAATCACCGCGCGTTACGGGGACATTTCGAAAAAGAGGAAATTAATGACATTCCTGGGATGGAGGAACAGCCGAACAACATGTTGCAATTGGATGAGCAGGGCAACAGTTTAATacagttgtaa
Protein Sequence: MSSYQCRTCREPQGGSFYSLGELLDEDRHPNKTLADFLWDIAKINNETEVAKRLPQQICEGCSHQLKNAYSFVLQAQATNEKLQANLYIENVKTFTATVVSDKQNDCLLESPIDIPSEQTEIKKETEFNDEQETVSNEEFVNISKNESGIEVKREVGVDLSAVENDTESINTEDNMVIDPITTVKTNWHKDADNDGIEHLSNLDNSLSEDSDTPLLKRRRSRQISTLTFQFTFRDNDGRYHCNKCSKSFAWKKDAKRHLLLHSDIYPYECTECTRRFQRKDKFDKHVEVHSKRNEKKLTEKRLHSNINTEDEQMEFDSCLQLHTTVSETSEDDSDGDEIITKRLRSRRASSKKPEFTYCNDDGRYHCNRCNKDFAWKKDVERHIKSHFGIFPFECIKCHHRFQRKDKFAEHLKIHAKHEKKVRRPRPIQWNFAEHLYTEQRFRSLECKLCPEVIENIATLRQHIQTHNETHTLHLDAESDVIKELFPNFNGDVIKIKEKICKDIRDKVFAKYYTIVNAYGYEMALSDSDAEHDSNVDKYNCELCNEKFSRKYQVFQHSKSEHSQDKLPHKCNVCKLEFVSRTMFELHSRTQCRNKDRKYQCLKCPGKFVWVQNLQRHNCSNRLNVYVPKRPEQRKRNLLQCNFCDKTFRYATDLKRHQETHNLKSQSHVCPICSQPFLKAENLRQHLRQDHEQIKRRIECCLCGEKLKTLAELRVHLLRHSDGWSGIRYTEGQYFKVHWPHGCQGKESEVERSIIIDFAGQNLTNYYTAVDESGNELDLYDSESDFETGSKQGGNPLPVSYTCDLCGEVFFRRTRILQHQHSAHADEEASLPHACSRCEKRYVCLGLLEQHYKRDCGNIYKRFNCQRCSARFVWEENLQQHMQRQHIDPEQQISRQLANKLQCDQCNKVFVWPKDLTRHKRIHMPDDEKFECLYCERKFYRKDHLQTHLRVHGSGGSMATTTAAATKRELNRKVNAVDPHLCRPNGCKCVQCKICLSKHTKIADLRTHILEHRTNVSLSQHVTTNSEVSLLFYPDEAPMSRELLIARMMADITAGQLDRFYSITNELGHEISISGSDTDDTDSDSEPDEVLYHATGENIRHPRRSIYNCDLCSITVTRKYKLFAHQASDHNWDDAPHVCQHCGARFLCEKLLQSHYRHQCKNLLKRYVCRKCPQRFMWKENLKMHLRTMHPDSEEVKKCFAPSSFDCEECSRSFQMQKDLTRHMMTHRVDATVFPCLWCPRKFYRRSNLYLHIKRHGITSHQLSAAASHITASKGPNGIKQIYCRVCNIKFQSLSALRTHLRQETTEVLSSHHSYNSPHNYSIMNELGYELSLDDSETDEGGNAKTYKCQMCGLVCKRRYEMGQHQLSVHKHEHITLKCDKCVFRTVSSDIMEHHMRTQCNNNEKLHPCTHCSYKFMWPENLDVHMKLVHPEEIQKTVEAAEDVAVSSRSEPVPLQEFHCDKCDSRYNRKDRLIAHIKKIHPLVGDDASCSTNVVKVNLSKDEKKQPKEKKFLCAFCGRAVSSSSNLVVHMRRHTGEKPFQCEFCDKAFPRSSDLACHRRTHTGEKPHRCTVCDKSFSRSYKLHTHMRIHSGERPYKCSFCEKSFTQSNDLALHVRRHTGERPYVCNICDEGFIQGTALKNHRALRGHFEKEEINDIPGMEEQPNNMLQLDEQGNSLIQL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00191494;
90% Identity: iTF_01563940;
80% Identity: -