Bdor007826.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Bactrocera dorsalis
Gene Symbol
-
Assembly
GCA_000789215.2
Location
NW:1176346-1182090[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 28 0.054 3.1 8.0 1.7 1 23 256 278 256 278 0.96
2 28 0.0011 0.064 13.2 2.3 1 23 284 306 284 306 0.98
3 28 0.018 1 9.5 2.4 1 23 381 403 381 403 0.98
4 28 0.56 32 4.8 5.6 1 23 409 431 409 431 0.95
5 28 0.41 23 5.2 0.1 2 23 462 483 461 483 0.92
6 28 0.051 2.9 8.0 2.3 1 23 555 578 555 578 0.96
7 28 1 57 4.0 1.2 1 22 585 606 585 606 0.89
8 28 2.4e-06 0.00014 21.6 2.0 2 23 656 677 655 677 0.97
9 28 0.0016 0.091 12.8 0.4 1 23 684 707 684 707 0.96
10 28 0.0066 0.38 10.8 0.6 2 23 715 736 714 736 0.96
11 28 0.014 0.77 9.9 1.5 1 23 817 840 817 840 0.96
12 28 0.15 8.7 6.5 1.6 1 23 879 902 879 902 0.96
13 28 0.00022 0.013 15.5 0.4 2 23 918 939 917 939 0.97
14 28 2.8e-05 0.0016 18.3 4.2 1 23 946 968 946 968 0.98
15 28 0.00012 0.007 16.3 1.2 1 23 1123 1146 1123 1146 0.95
16 28 0.0018 0.1 12.6 1.1 1 23 1183 1206 1183 1206 0.98
17 28 7.6e-06 0.00043 20.1 1.2 1 23 1221 1243 1221 1243 0.98
18 28 2.9e-05 0.0017 18.2 1.3 1 23 1250 1272 1250 1272 0.98
19 28 0.018 1 9.5 0.3 2 21 1299 1318 1298 1319 0.94
20 28 0.00064 0.036 14.0 2.4 1 23 1363 1386 1363 1386 0.97
21 28 3.5 2e+02 2.3 0.6 2 22 1394 1414 1393 1414 0.94
22 28 0.066 3.7 7.7 1.8 1 23 1423 1446 1423 1446 0.96
23 28 0.0019 0.11 12.6 3.3 1 23 1474 1497 1474 1497 0.97
24 28 1.1e-05 0.00065 19.5 0.2 2 23 1528 1549 1527 1549 0.95
25 28 5.1e-05 0.0029 17.5 2.3 1 23 1555 1577 1555 1577 0.99
26 28 3e-06 0.00017 21.4 6.4 1 23 1583 1605 1583 1605 0.98
27 28 4.7e-06 0.00026 20.7 1.5 1 23 1611 1633 1611 1633 0.99
28 28 0.0049 0.28 11.2 0.1 1 21 1639 1659 1639 1663 0.91

Sequence Information

Coding Sequence
atggTTTCATATCAATGTCGAACTTGTTGTGAGGATAATGTTGGCAGTTTCTATTCTCTTCAAGAACTGTTGGATTACGATCGTCACCCTAAAAAAACTGTAGCAGATTTCCTATGGGACATAGCTAAAATTAATAATAACACTGAAGTTGCTAAACGTTTACCACAGGATATTTGTGGAGAGTGTTCACGTAAGCTTAAAAATACGTATTCATTTGTACTTCAAGCgcaagcagcaaataaaaaattacaagctACTTTGtacattgaaaatgttaaaacttATACTACTAAGGAACTAATAGATAAGCAGAATGACTGTTTATTGGAATCGCCCATTGATATACCTATTCgacaaatagaaattaaaaaggaaGTCGCATTCGAGCAAGGAGATGAAAAAAGCGAGCAAGGAGATGAAGGCAATGAACAATTCGTTAACATCGGTAAAAATGAATGTGAAATCGTGAAAACTGTGGATGAAATAGAACAGTTTGTAAAAGACGAAGTGGTCGCGGATGTAAATGCAGGAGAAAATGATTCCGATAGCATTAGTACAgAAGGTGACGTACACACAGATCCTATAACCACAGGGGAAACTAGTTGGTACAAAGAAAAAGACGATAGTGATGGAATAGAAAATCTGAGTAATCTAGATAATAACTTGAGTGAAGATAATTCAGACACCCCATTATTGAAGCGACGTCGGCTTGGGCAGTTATCCACGCAGACCTTCGAATGTACATTTCGTGAGGATGATGGTCGGTATCATTGTAATAAATGTCCCAAAGATTTTGCATGGAAGAAAGACGCGAAACGGCATTTGCTGTTACATTCCAACATCTATCCATACAAATGCACAGAATGCAGCCGTCTCTTCCAGAGAAAGGATAAATTTGATAAACATATGGAAGTACATTCCAAACGAGAGCAAAGAAATTCACATAAAAGGAAAGTTCATTCCAAAAGAAATTCCGAATTTGAACAAATGGTATTAGATTCAAATTTACAACCCGATATAAATGATAGTGAAACTAGTGATGATGACAGTGATCAAGATAaacttctaacaaaacaacaaagaagtAGGCGGTCATCTACCAAAAAACCGGAATTCACCTATTGCAATGACGATTGTCGGTATCATTGTAACAGATGTAATAAAGATTTTGCTTGGAAAAAAGATGTAGAACGTCACATAAAAAGTCATTTCGGAATTTTTCCATTCGAATGTATCAAATGCCATCATCGCTTTCAGCGAAAAGATAAGTTTGCTGAACACTTAAAAATTCATGCAAAACGCGAGAAAAGCGTTCGTCGCCCTAGACCAATACAGTGGAATTTTGCTGAACATCTTTATACGGAGCAGCGATTTCTTTCGGTAGAGTGCAAACTTTGCACTGAGGTTATACCAAACATTAAAACTCTACGTCAACATATGCCAACACATAATGAGGTCCATACGTTACATTTAGACGCTGAAAGTGACGTGATTAAAGAGTTATTCCCCAATTTTAATGGTGACATAATAGAAATTAAGGAAAACATTTGCAAAGACATAAGGCATAAACTATTTGCGAAGTATTACGCAATTGTTAATGCGTATGGCTACGAAATGGCTTTGAGTGATTCTGATTCTGAAAATGATTCGGCTGGGGAGAAGTACGAATGCGAATTATGTCACGTAAAGTTGGGACGAAAATATCAGCTATTTCAACATTCAAAGTCGGACCACTCACAAGACAAACTTCCCCACAAATGCAACGTTTGCAAGTTGGAGTTTGTCAACACAACAATATTTGAGAAACATTCGCGTACACAATGCAGAAATAAAGATCGAAAATACCAATGTCTCAAATGTCCGGGGAAATTTGTTTGGGTACAGAATCTTCAGGGCCATAAATGCTCTAATCGGCTAAATGTTTATGTACCAAAGCGTCCAGAACAGCggaaaagaaatttattgcggtgcaatttttgtgataaaactTTTCGTTATGCTACGGACTTGAAACGACATCAAGAGACACATAACCTAAAGAGTCAGTCTCATGTGTGCCCCATCTGCAGCCAACCCTTTttgaaagcagaaaatttgcGTCAACATTTGCGACAGGATCACGAACAAATTAAACGACGTATCGAATGTTGCTTGTGTGGAGAGAAACTGAAGACTCTTGCTGAGCTTCGCGTTCATTTATCACGTCATTCGGATGGGTGGACTGGTATCAGATATACAGAAGGTCAATACTTTAAGATTCATTGGCCGCAAGGTTGTCAAGGAAAAGAAGGGGAGGTCGAACGTAGCATTATAATAGATTTTGCTGgacaaaatttaacaaactaCTATTCGGCTGTTGATGAGAGTGGCAATGAGTTGGATTTGTATGATTCAGAGAGTGATTTTGAAAcggacaaaaaacaaaacggaaATCCAATATCAATACCCTATACGTGTGATTTGTGTGGTGAAGTTTTCTTCAGGAGAACACGTATCCTCCAGCATCAACATAGTGCACATGCCGATGGGGAAGACTCCTTCCCTCATGCTTGTTGTCGTTGTGAGAAACGTTTCGTTTGCTTAGGCTTATTAGAACAACACTATAAACGCGATTGTGGTAATATATATAAGAGATTCGATTGTAAACGATGCTCAGCACGATTTGTGTGGGAGGCAAACCTACATCAGCATATGCAACGGCAACACATTGATCCAGAGCAACAAATAAGTAGACAACTTGCCAATAAACTACAATGTGATCAATGTAATAAAGTGTTTATTTGGCCAAAGGATCTGACGCGACACAAGCGCATACACATGCCCGATGATGAGAAGTTTGAATGTCTGTATTGTGAAAGAAAATTCTATCGAAAGGATCACTTGCAGACTCACTTAAAAGTTCATGGTTCCGGAGGGAGTATGGCCACGACAACAGCGGCTGCCAGCAAACGTGAGCTTATTCGCAAAGTAAATGCTGTCGATCCGTATCTCTGCCGGCCTAACGGCTGCAAATGTGTTCAATGCAAAATCTGCTTATCCAAGCATACAAAAATTGCAGATTTGCGAACACATATCTTAGAACATCGGACAAATGTGTCATTGTCACAACATGTAACATCGAATTCagaaatttctttacttttttatccAGATGAAGCGCCTATGTCGAGGGATTTACTAATGGCACGCATGATGGCTGATATTACAGCTGGCCAGATGGATCGATTTTATTCAATCACCAATGAATTGGGCCATGAGATAAGCATTAGCGGCTCCGACACCGACGACACTGATTCGGAGTCCGAACCTGATGAATCATTGTATCTTGCTATGGGACAAAATATTCGGCATCCGAGGCGTTCAATATATAGTTGCGATTTGTGTACCATCACGTTCACGCGTAAGTACAAACTTTTTGCTCATCAAGTGAGCGATCATAATTGGGATGACGCTCCCCATGTATGTCAACATTGCCAGGCGCGTTTCTTGTGCGAGAAGCTGCTGCATTCGCATTATCGACACCAGTGCAAGAATTTATTGAAACGTTACGTGTGTCGCAAATGCCCTCAACGCTTTATGTGGAAGGAGAATCTGAAAATGCATTTACGCACAATGCACCCTGACAGCGAAGAGGTTAAGAAGtgtttTGCACCTAGTTCATATGATTGCGAGGAGTGCTCCAGAAGTTTTCAGATGCAGAAGGATCTCACGCGCCACATGATGACACATCGAGTCGATGCTACTGTATTTCCATGTTTATGGTGTCCACGTAAATTTTACCGAAGAAGTAATTTATACTTGCACATCAAGAGGCATGGCATAACATCACATCAGTTGAGTGCTGCCGCTTCTCACATTACTGCTTGTAAAGGGCCGAATGGCATAAAACAGATTTATTGTCGTGTTtgtaacataaaatttcaaaaattgtctgCACTACGCACTCATCTGCGGCAAGAGACGTCAGCAGAGTCATCGTCACACCATAATTACCATTCACAGCacaattattcaataatgaatgagTTGGGGTACGAGTTGGACATTGATGATTCAGAGACAGATGAGGACGATAATGCTAAAACATATAAATGTCAAATGTGCGGATTAGTTTGTAAAAGACGATATGAAATGAGCCAGCATCAGTTGTCAGTGCATAAGCACGAGCATATAACACTTAAATGTGATAAGTGTGTATTTAGAACCGTCACAAGTgaTATTATGGAACACCACATGCGCACACAATGCAATAATAGTGAAAAATTGCACCAATGCACGCActgttcatataaatttatgtggcCTGAGAATTTGGACGTGCACATTAAGCTGGTTCATCCAGAAGAAAGACAAAAATCTGTTGAAGTTGCAGAAGATGTTGTGGCGACCTCCCGCAGTGAGCCTGTCCCGCTTCAAGAATTCCATTGCGATAAATGTGATAGCCGTTATAATCGCAAAGATCGCCTGATTgcacatatgaaaaaaatgcatgCGGACGGTGATGTCCTCAGCAGCAGTATGAATCTTGGCAGTGCCAAGATATCCAACGAAGAAAAAAAGCAACCTAAAGAAAAGAAGTTTCTTTGTGCATTTTGTGGGCGTGCTGTGAGCTCCTCATCTAACTTGATTGTTCACATGAGACGCCACACAGGCGAGAAACCATTTCAGTGTGAATTTTGTGATAAAGCTTTTCCACGCTCATCTGATTTGGCATGCCATCGGCGTACACATACGGGTGAAAAACCCCATCGTTGCACAGTGTGTGACAAGTCGTTTTCACGCTCCTACAAGTTGCATACGCACATGCGTATACATTCTGGCGAAAGGCCGTACAAGTGTTCATTTTGCGAGAAAAGCTTTACACAATCTAATGATCTTGCTTTGCATGTACGTCGCCATACCGGAGAACGGCCATACGTGTGCAATATTTGCAATGAAGGTTTTATTCAAGGAACTGCGTTAAAAAATCATCGTACATTGCGCGGACATTTTGAAAAAGAGGAAATTAAATACGTTTCTGAGGTAAAGAAACAACCGAGCAGCGTATTGCAATTAGATGAGGAGGGTAATAGcttaatacttttataa
Protein Sequence
MVSYQCRTCCEDNVGSFYSLQELLDYDRHPKKTVADFLWDIAKINNNTEVAKRLPQDICGECSRKLKNTYSFVLQAQAANKKLQATLYIENVKTYTTKELIDKQNDCLLESPIDIPIRQIEIKKEVAFEQGDEKSEQGDEGNEQFVNIGKNECEIVKTVDEIEQFVKDEVVADVNAGENDSDSISTEGDVHTDPITTGETSWYKEKDDSDGIENLSNLDNNLSEDNSDTPLLKRRRLGQLSTQTFECTFREDDGRYHCNKCPKDFAWKKDAKRHLLLHSNIYPYKCTECSRLFQRKDKFDKHMEVHSKREQRNSHKRKVHSKRNSEFEQMVLDSNLQPDINDSETSDDDSDQDKLLTKQQRSRRSSTKKPEFTYCNDDCRYHCNRCNKDFAWKKDVERHIKSHFGIFPFECIKCHHRFQRKDKFAEHLKIHAKREKSVRRPRPIQWNFAEHLYTEQRFLSVECKLCTEVIPNIKTLRQHMPTHNEVHTLHLDAESDVIKELFPNFNGDIIEIKENICKDIRHKLFAKYYAIVNAYGYEMALSDSDSENDSAGEKYECELCHVKLGRKYQLFQHSKSDHSQDKLPHKCNVCKLEFVNTTIFEKHSRTQCRNKDRKYQCLKCPGKFVWVQNLQGHKCSNRLNVYVPKRPEQRKRNLLRCNFCDKTFRYATDLKRHQETHNLKSQSHVCPICSQPFLKAENLRQHLRQDHEQIKRRIECCLCGEKLKTLAELRVHLSRHSDGWTGIRYTEGQYFKIHWPQGCQGKEGEVERSIIIDFAGQNLTNYYSAVDESGNELDLYDSESDFETDKKQNGNPISIPYTCDLCGEVFFRRTRILQHQHSAHADGEDSFPHACCRCEKRFVCLGLLEQHYKRDCGNIYKRFDCKRCSARFVWEANLHQHMQRQHIDPEQQISRQLANKLQCDQCNKVFIWPKDLTRHKRIHMPDDEKFECLYCERKFYRKDHLQTHLKVHGSGGSMATTTAAASKRELIRKVNAVDPYLCRPNGCKCVQCKICLSKHTKIADLRTHILEHRTNVSLSQHVTSNSEISLLFYPDEAPMSRDLLMARMMADITAGQMDRFYSITNELGHEISISGSDTDDTDSESEPDESLYLAMGQNIRHPRRSIYSCDLCTITFTRKYKLFAHQVSDHNWDDAPHVCQHCQARFLCEKLLHSHYRHQCKNLLKRYVCRKCPQRFMWKENLKMHLRTMHPDSEEVKKCFAPSSYDCEECSRSFQMQKDLTRHMMTHRVDATVFPCLWCPRKFYRRSNLYLHIKRHGITSHQLSAAASHITACKGPNGIKQIYCRVCNIKFQKLSALRTHLRQETSAESSSHHNYHSQHNYSIMNELGYELDIDDSETDEDDNAKTYKCQMCGLVCKRRYEMSQHQLSVHKHEHITLKCDKCVFRTVTSDIMEHHMRTQCNNSEKLHQCTHCSYKFMWPENLDVHIKLVHPEERQKSVEVAEDVVATSRSEPVPLQEFHCDKCDSRYNRKDRLIAHMKKMHADGDVLSSSMNLGSAKISNEEKKQPKEKKFLCAFCGRAVSSSSNLIVHMRRHTGEKPFQCEFCDKAFPRSSDLACHRRTHTGEKPHRCTVCDKSFSRSYKLHTHMRIHSGERPYKCSFCEKSFTQSNDLALHVRRHTGERPYVCNICNEGFIQGTALKNHRTLRGHFEKEEIKYVSEVKKQPSSVLQLDEEGNSLILL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00191494;
90% Identity
iTF_00191494;
80% Identity
-