Btry000994.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Bactrocera tryoni
Gene Symbol
Sdhaf3
Assembly
GCA_016617805.2
Location
NC:1157562-1166939[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 28 0.059 3.5 7.9 1.7 1 23 290 312 290 312 0.96
2 28 0.00025 0.015 15.4 1.6 1 23 318 340 318 340 0.98
3 28 0.019 1.1 9.4 2.4 1 23 415 437 415 437 0.98
4 28 0.6 36 4.7 5.6 1 23 443 465 443 465 0.95
5 28 0.0089 0.53 10.5 0.2 2 23 496 517 495 517 0.97
6 28 0.055 3.3 8.0 2.3 1 23 589 612 589 612 0.96
7 28 1.1 65 3.9 1.2 1 22 619 640 619 640 0.89
8 28 2.6e-06 0.00016 21.6 2.0 2 23 690 711 689 711 0.97
9 28 0.0017 0.1 12.7 0.4 1 23 718 741 718 741 0.96
10 28 0.0025 0.15 12.3 1.0 2 23 749 770 748 770 0.96
11 28 0.015 0.87 9.8 1.5 1 23 851 874 851 874 0.96
12 28 0.083 4.9 7.5 0.4 1 23 913 936 913 936 0.96
13 28 0.00024 0.014 15.4 0.4 2 23 952 973 951 973 0.97
14 28 3.1e-05 0.0018 18.2 4.2 1 23 980 1002 980 1002 0.98
15 28 6.4e-05 0.0038 17.2 1.0 1 23 1157 1180 1157 1180 0.96
16 28 0.0019 0.11 12.6 1.1 1 23 1217 1240 1217 1240 0.98
17 28 1.9e-05 0.0011 18.9 1.6 1 23 1255 1277 1255 1277 0.98
18 28 3.2e-05 0.0019 18.2 1.3 1 23 1284 1306 1284 1306 0.98
19 28 0.019 1.1 9.5 0.3 2 21 1333 1352 1332 1353 0.94
20 28 0.00069 0.041 14.0 2.4 1 23 1397 1420 1397 1420 0.97
21 28 3.8 2.2e+02 2.2 0.6 2 22 1428 1448 1427 1448 0.94
22 28 0.2 12 6.2 1.9 1 23 1457 1480 1457 1480 0.95
23 28 0.002 0.12 12.5 3.3 1 23 1508 1531 1508 1531 0.97
24 28 1.2e-05 0.00074 19.5 0.2 2 23 1563 1584 1562 1584 0.95
25 28 5.6e-05 0.0033 17.4 2.3 1 23 1590 1612 1590 1612 0.99
26 28 3.2e-06 0.00019 21.3 6.4 1 23 1618 1640 1618 1640 0.98
27 28 1.5e-06 8.7e-05 22.4 1.5 1 23 1646 1668 1646 1668 0.99
28 28 0.0053 0.32 11.2 0.1 1 21 1674 1694 1674 1698 0.91

Sequence Information

Coding Sequence
ATGTCTAAAATAATTGTTAATCAACTGACACACGCACAAAAGGTGCGTATtctatataaaacaattttacgtTTACACAGAGGTCTACCAGACGAACTTCGGGAATTGGGTGATAAATATGCTCGCGATGAATTTCGCCGTCATCTTACTTGCTCACCTATGGAGGCGCAATTATTTATAACAGAATGGGCGAAGTATGCCGTAACAATTACTTCACAATTAGGTCTGAAAGGCAAAGCAAAAGGTACGATAGGAGACCAATTGGACACAAGCACTGTGGAAATGCTTAAAGACGACCAAGTGATACAATTGTATGAATTAATGTTGGTTGCTAAGGGCATTGAAGCTCaagcagcaaataaaaaattacaagctAGTTTGTAcatcgaaaatattaaaacttataCTACTAATAAGGAACTAATAGATAAGCAGAATGACTGTTTATTGGAATCGCCCATTGATATACCTATTCGacaaacagaaattaaaaagGAAGTCACGTTCGAGCAAGGAGATGAAGGCAATAAGGAATTCGTTAACATCGGTAAAAATGAATGTCAAATCGTGAAAACTGTGGATGAAATAGTACAGTTTGTAAAAGACGAGGTGGTCGCGGATGTAAATGCAGGAGAAAATGATTCCGATAGCATTAGTACAGACGGTGACGTAAACACAGATCCCATAACCACAGTGGAAACTAGTTGGTACAAAGAAAAAGGTGATAGTGATGGAATAGAAAACCCGAGTAATCTGGATAATAATTTGAGTGAAGATATTTCTGACACCCCATTATTGAAGCGACGTCGGCTTGGGCAGTTATCCACTCAGACCTTCGAATGTACATTTCGTGAGGATGATGGTCGGTATCATTGTAATAAATGTCCCAAAGATTTTGCATGGAAGAAAGATGCGAAACGGCATTTGCTGTTACATTCCAACATCTCTCCATACAAATGCACAGAATGCAGCCGTCTCTTCCAGAGAAAGGATAAACTTGATAAACATATGGAAGTACATTCCAAACGAGagcaaagaaatttaaataaaaggaaaGTTCATTCCAAAAGAGATTCCGAAATTGAACAAATGGTATTAGATTCAGATTTACAACTCGATATAAATGATAGTGAAACTAGTGATGATGACAGTGATCAAGATGAactTCTAACAACACAACAAAGGAGTAGGCGGCCATCTACCAAAAAACCGGAATTCACCTATTGCAATGACGATTGTCGGTATCATTGTAACAGATGTAATAAAGATTTTGCTTGGAAAAAAGATGTAGAACGTCACATAAAAAGTCATTTCGGAATATTTCCATTCGAATGCATCAAATGCCATCATCGCTTTCAGCGAAAAGATAAGTTTGCTGAACACttaaaaattcatacaaaaCGCGAGAAAAGCGTTCGTCGCCCTAGACCAATACAGTGGAATTTTGCTGAACACCTTTATACGGAGCAGCGTTTTATTTCGGTAGAGTGCAAACTTTGCTCCGAGGTTATACCAAACATTAAAACTCTACGTCAACATATGCAAACACATAATGAGGTCCATACGTTACATTTAGACGCTGAAAGTGACGTGATTAAAGAGTTATTCCCCAATTTTAATGGtgacataatagaaattaagGAAAACATTTGCAAAGACATAAGGCATAAACTATTTGCGAAGTATTACGCAATTGTTAATGCGTATGGCTATGAAATGGCTTTGAGTGATTCTGATTCTGAAAATGATTCGGCTGGGGAGAAGTACGAATGCGAATTATGTCACGTAAAGTTGGGACGAAAATATCAGCTATTTCAGCATTCAAAGTCAGATCACTCCCAAGACAAACTTCCCCACAAATGCAACGTTTGCAAGTTGGAGTTTGTCAACACAACAATATTTGAGAAACATTCACGGACACAATGCAGAAATAAGGATCGAAAATATCAATGTCTCAAATGTCCGGGGAAATTTGTTTGGGTACAGAATCTTCAGGGCCATAAATGCTCTAATCGGCTAAATGTTTATGTACCGAAGCGTCCAGAACAGCGGAAACGAAATTTATTGCGGTGCAATTTTTGTGATAAAACTTTTCGTTATGCTACGGACTTGAAACGACATCAAGAGACACATAACTTAAAAAGTCAGTCTCATGTGTGTCCCATCTGCAGCCAACCCTTTTTGAAAGCAGAAAATTTGCGTCAACATTTGCGACAGGATCACGAACAAATTAAACGACGTATCGAATGTTGCTTGTGTGGAGAGAAACTGAAGACTCTTTCTGAGCTTCGCGTTCATTTATCACGTCATTCGGATGGGTGGACTGGCATCAGATATACAGAAGGTCAATACTTTAAGATTCATTGGCCGCAAGGTTGTCAAGGAAAAGAAGGAGAGGTCGAACGTAGCATAATAATAGATTTTGCTGGACAAAATTTAACGAACTACTATTCGGCTGTTGATGAGAGTGGCAATGAGTTGGATTTGTATGATTCAGAAAGTGATTTTGAAACGGACAAAAAGCAAAACGGAAATCCATTATCAGTACCCTATACGTGTGATTTGTGTGGTGAAGTTTTTTTCAGGAGAACACGCATCCTTCAACATCAACATAGTGCACATGCTGATGGAGAAGGCTCCTTCCCTCATGCTTGTTGTCGTTGTGAGAAACGTTTCGTTTGCTTGGGCTTATTAGAACAACACTATAAACGCGATTGTGGTAATATCTATAAGCGATTCGATTGTCAACGATGTTCAGCACGATTTGTGTGGGAGGTAAACCTGCAACAGCATATGCAACGGCAACACATTGATCCAGAACAACAAATAAGTCGACAACTTGCCAATAAACTACAATGTGATCAAtgtaataaagtttttatttggcCAAAAGATCTCACGCGACACAAACGCATACACATGCCCGATGATGAGAAGTTTGAATGTCTGTATTGTGAAAGAAAATTCTATCGAAAGGATCACTTGCAGACTCATTTAAAAGTTCATGGTTCCGGAGGGAGCATGGCCACGACAACAGCGGCTGCCAGCAAGCGGGAGCTTATTCGTAAAGTAAATGCTGTCGATCCGTATCTCTGCCGGCCTAATGGCTGCAAATGTGTTCAATGCAAAATCTGCTTATCCAAGCATACAAAAATTGCAGATTTGCGAACACATATCTTGGAACATCGGACAAATGTGTCATTATCACAACATGTAACAACGAATTCAgaaatttctttgcttttttatcCAGATGAAGCGCCTATGTCGAAGGATTTACTAATGGCGCGCATGATGGCTGATATTACAGCCGGCCAGATGGATCGATTTTATTCAATCACCAATGAATTGGGCCATGAGATAAGCATTAGCGGCTCCGACACCGACGACACTGATTCAGAGTCCGAACCTGATGAAGCATTGTATCTTGCTATGGGGCAAAATATTCGGCATCCAAGGCGTTCAATATATAGTTGCGATTTGTGTACCATCACGTTCAGTCGTAAGTACAAACTTTTTGCTCATCAAGCGAGCGATCATAATTGGGCGGACGCTCCCCATGTATGTCAACATTGCCAGGCGCGTTTCTTGTGCGAGAAGCTGTTGCATTCGCATTATCGGCACCAGTGCAAGAATTTACTGAAACGTTACGTGTGTCGCAAATGTCCTCAACGCTTTATGTGGAAGGAGAATCTGAAAATGCATTTACGCACAATGCACCCTGACAGCGAAGAGGTTAAGAAGtgtTTCGCACCTAGTTCATATGATTGCGAGCAGTGCTCCAGAAGTTTTCAGATGCAGAAGGATCTCACGCGCCACATGATGACACATAGAGTCGATGCTACTGTATTTCCATGTTTATGGTGTCCACGTAAATTTTACCGAAGAAGTAATTTATACTTGCACATCAAGAGGCATGGCATAACATCACATCAGTTGAGTGCTGCCGCTTCTCACATTACTGCTTGTAAAGGGCCGAATGGAATAAAACAGATTTATTGTCGAGTTTgtaacataaaatttcaaaaattatctgcACTACGCACTCATCTGCGGCAAGAGACGTCAGCAGTGCCATCTTCACACCACAATTACCGTTCACAGCacaattattcaataatgaatgagTTGGGGTACGAGTTGGACATTGACGATTCAGAGACAGATGAGGACCATAATGCTAAAACATATAAATGTCAAATGTGCGGATTAGTTTGTAAAAGACGATATGAAATGAGTCAGCATCAGTTATCGGTGCATAAGCACGAGCATATAACACTTAAATGTGATAAGTGTGTATTTAGAACAGTCACAAGTgatATTATGGAACATCACATGCGCACACAATGTAATAATAGTGAAAAATTACACCAATGTACGCACtgttcatttaaatttatgtgGCCTGAGAATTTGGATGTGCACATTAAGCTGGTTCATCCAGAAGAAGGACAAAAATCGGTTGAAGTTGCAGAAGACGTTGTAGCGACCTCCCGCAGTGAGCCTGTCCCGCTTCAAGAATTCCATTGCGATAAATGTGATAGCCGTTATAATCGCAAAGATCGCCTGATTGcacatatgaaaaaaatgcatcCGGTAGACGGTGATGTCCCCAGCTGCAGTATGAATATTGGCGATGTCAAGATATCCAACGATGAAAAAAAGCAACCTAAAGAAAAGAAGTTTCTTTgtgcattttgtgggcgtgctGTGAGCTCCTCATCAAATTTGATTGTTCACATGCGACGTCACACAGGCGAGAAACCATTTCAGTGTGAATTTTGTGATAAAGCATTTCCACGCTCATCTGATTTGGCATGCCATCGGCGTACTCATACGGGTGAAAAGCCCCATCGTTGCACAGTGTGTGACAAGTCGTTTTCACGCTCCTACAAGTTGCAtacgcacatgcgtatacattcTGGCGAAAGGCCGTACAAGTGTTCATTTTGCGATAAAAGCTTTACACAATCTAATGATCTTGCTTTGCATGTACGTCGCCATACTGGAGAACGACCGTATGTGTGCAATATTTGCAATGAAGGTTTTATTCAAGGAACTGCGTTAAAAAATCATCGTACATTGCGCGGACATTTTGAAAAAGAGGAAATTAAAAACGTTTCTGAGATAAAGAAACAACCGAGCAGCGTATTGCAATTGGATGAGCAGGGTAATAGCTTAatacttttgtaa
Protein Sequence
MSKIIVNQLTHAQKVRILYKTILRLHRGLPDELRELGDKYARDEFRRHLTCSPMEAQLFITEWAKYAVTITSQLGLKGKAKGTIGDQLDTSTVEMLKDDQVIQLYELMLVAKGIEAQAANKKLQASLYIENIKTYTTNKELIDKQNDCLLESPIDIPIRQTEIKKEVTFEQGDEGNKEFVNIGKNECQIVKTVDEIVQFVKDEVVADVNAGENDSDSISTDGDVNTDPITTVETSWYKEKGDSDGIENPSNLDNNLSEDISDTPLLKRRRLGQLSTQTFECTFREDDGRYHCNKCPKDFAWKKDAKRHLLLHSNISPYKCTECSRLFQRKDKLDKHMEVHSKREQRNLNKRKVHSKRDSEIEQMVLDSDLQLDINDSETSDDDSDQDELLTTQQRSRRPSTKKPEFTYCNDDCRYHCNRCNKDFAWKKDVERHIKSHFGIFPFECIKCHHRFQRKDKFAEHLKIHTKREKSVRRPRPIQWNFAEHLYTEQRFISVECKLCSEVIPNIKTLRQHMQTHNEVHTLHLDAESDVIKELFPNFNGDIIEIKENICKDIRHKLFAKYYAIVNAYGYEMALSDSDSENDSAGEKYECELCHVKLGRKYQLFQHSKSDHSQDKLPHKCNVCKLEFVNTTIFEKHSRTQCRNKDRKYQCLKCPGKFVWVQNLQGHKCSNRLNVYVPKRPEQRKRNLLRCNFCDKTFRYATDLKRHQETHNLKSQSHVCPICSQPFLKAENLRQHLRQDHEQIKRRIECCLCGEKLKTLSELRVHLSRHSDGWTGIRYTEGQYFKIHWPQGCQGKEGEVERSIIIDFAGQNLTNYYSAVDESGNELDLYDSESDFETDKKQNGNPLSVPYTCDLCGEVFFRRTRILQHQHSAHADGEGSFPHACCRCEKRFVCLGLLEQHYKRDCGNIYKRFDCQRCSARFVWEVNLQQHMQRQHIDPEQQISRQLANKLQCDQCNKVFIWPKDLTRHKRIHMPDDEKFECLYCERKFYRKDHLQTHLKVHGSGGSMATTTAAASKRELIRKVNAVDPYLCRPNGCKCVQCKICLSKHTKIADLRTHILEHRTNVSLSQHVTTNSEISLLFYPDEAPMSKDLLMARMMADITAGQMDRFYSITNELGHEISISGSDTDDTDSESEPDEALYLAMGQNIRHPRRSIYSCDLCTITFSRKYKLFAHQASDHNWADAPHVCQHCQARFLCEKLLHSHYRHQCKNLLKRYVCRKCPQRFMWKENLKMHLRTMHPDSEEVKKCFAPSSYDCEQCSRSFQMQKDLTRHMMTHRVDATVFPCLWCPRKFYRRSNLYLHIKRHGITSHQLSAAASHITACKGPNGIKQIYCRVCNIKFQKLSALRTHLRQETSAVPSSHHNYRSQHNYSIMNELGYELDIDDSETDEDHNAKTYKCQMCGLVCKRRYEMSQHQLSVHKHEHITLKCDKCVFRTVTSDIMEHHMRTQCNNSEKLHQCTHCSFKFMWPENLDVHIKLVHPEEGQKSVEVAEDVVATSRSEPVPLQEFHCDKCDSRYNRKDRLIAHMKKMHPVDGDVPSCSMNIGDVKISNDEKKQPKEKKFLCAFCGRAVSSSSNLIVHMRRHTGEKPFQCEFCDKAFPRSSDLACHRRTHTGEKPHRCTVCDKSFSRSYKLHTHMRIHSGERPYKCSFCDKSFTQSNDLALHVRRHTGERPYVCNICNEGFIQGTALKNHRTLRGHFEKEEIKNVSEIKKQPSSVLQLDEQGNSLILL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00191494;
90% Identity
iTF_00191494;
80% Identity
-