Basic Information

Insect: Autographa gamma
Gene Symbol: -
Assembly: GCA_905146925.1
Location: LR989852.1:9046972-9051742[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.14 13 7.0 3.4 2 22 186 206 185 206 0.95

2 15 0.06 5.4 8.2 2.6 1 23 302 324 302 324 0.95

3 15 0.68 62 4.9 0.3 2 23 461 482 460 482 0.95

4 15 0.00062 0.056 14.5 0.6 2 23 562 583 561 583 0.96

5 15 0.036 3.2 8.9 0.2 1 23 591 613 591 613 0.97

6 15 0.065 5.9 8.1 3.6 1 23 649 671 649 671 0.95

7 15 0.00017 0.015 16.2 4.0 1 23 679 701 679 701 0.99

8 15 0.21 19 6.5 1.8 1 23 784 806 784 806 0.98

9 15 0.1 9.2 7.5 2.5 1 19 861 879 861 883 0.91

10 15 0.2 18 6.6 0.6 1 23 974 996 974 996 0.93

11 15 0.0026 0.24 12.5 1.2 1 23 1002 1024 1002 1024 0.96

12 15 0.0047 0.43 11.7 2.6 1 23 1114 1136 1114 1136 0.97

13 15 0.00012 0.011 16.7 1.4 1 23 1142 1164 1142 1164 0.99

14 15 0.23 21 6.4 2.9 1 23 1255 1277 1255 1277 0.96

15 15 0.0028 0.25 12.4 5.5 1 23 1288 1310 1288 1310 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.14	13	7.0	3.4	2	22	186	206	185	206	0.95
2	15	0.06	5.4	8.2	2.6	1	23	302	324	302	324	0.95
3	15	0.68	62	4.9	0.3	2	23	461	482	460	482	0.95
4	15	0.00062	0.056	14.5	0.6	2	23	562	583	561	583	0.96
5	15	0.036	3.2	8.9	0.2	1	23	591	613	591	613	0.97
6	15	0.065	5.9	8.1	3.6	1	23	649	671	649	671	0.95
7	15	0.00017	0.015	16.2	4.0	1	23	679	701	679	701	0.99
8	15	0.21	19	6.5	1.8	1	23	784	806	784	806	0.98
9	15	0.1	9.2	7.5	2.5	1	19	861	879	861	883	0.91
10	15	0.2	18	6.6	0.6	1	23	974	996	974	996	0.93
11	15	0.0026	0.24	12.5	1.2	1	23	1002	1024	1002	1024	0.96
12	15	0.0047	0.43	11.7	2.6	1	23	1114	1136	1114	1136	0.97
13	15	0.00012	0.011	16.7	1.4	1	23	1142	1164	1142	1164	0.99
14	15	0.23	21	6.4	2.9	1	23	1255	1277	1255	1277	0.96
15	15	0.0028	0.25	12.4	5.5	1	23	1288	1310	1288	1310	0.98

Sequence Information

Coding Sequence: ATGGGTCTACAATACGCAGAGAGGGAGATTGCCAGCTGCAAGAGTGACTCCAACGATGCTACAGCTTCAGATAATAATTTCAAAAAAGATTCATCGCAGTTGTCGCAAGATGTATACAGCCAGCTGTCACCTAACCTGAGCAATGAGTTACACAAACAAAGCAGAAAAATTCCCAGGCCAATACCACAACTAATACCTTTAAACACGTCGACACCCAATCAAAAACAATGTTCTGGTGAACCACCAACTAAACGGTTCAAGGAATCTTCACCAACAGAGAACGACAAAGATGATCTGTCTAGTGATGTTATGTTAGTCCCTGTTAATAGCAATCCATCTACTAAAGAAACCGCAGGACGTAAGAAAAATGAGTCATTCTTCGACAGATTAAAAGAAAGGCTGTTAACTGAAACAGGCGAAGAAGGTTCTTTAATATGTAAAATCTGTGGATTCGAAAGTAAATGCTTATCGGAACATTCTGTACACGAGAAAAACTGCTCACCGCTAAGTAATCGGATAACTGCAAATACATCACTTACAAGTTTAAGCTCCACTCGATGCCAAAACTGCAGGCACAGATGTAAATCCAGTGCCGATTTGTACATTCACATGCAAACTTGCGGAAATAAGAAAGTAGAAGATGAAAATGCTGTTCAAAATCAGGACAGTAATGATACAATCATTCCAATTCATGAAAAGGAGGCTGAACCACATCCGATGGAAAATGTTGTTTTTGTTTGGAACAATATAAACCAGGAGACAAATAAATTTGAAGTACCTCTCGATATAAACATAAACGACGATTGCACGCTTCCGGAGTTACATCGAAGCTTTGAAGCTGAGATCGTTGACGAGAATGAAACCATGAATTTATCGCCGAGCCAAGCTATCGGACGAAAGGTATTTAAATGTCCACATTGCCCTTTTTTCTCTACAACTGCATCCAGGTTTCACGTTCATATTGTAGGACACTTGAATAAAAAACCATTCGAGTGTTCCCTTTGCAAATATAAATCCAATTGGAGATGGGATATTACTAAGCATATTAAGTTGAAGTCTGCAAGAGACCCGGAGCACAACGATGCGAAGGTGTTAATGACTGACGAAACCGGAAGGAGAAACTATAGCAAATATAACAAATTCTTAGCAATGCCGGTTTTAAATGAAAATGGTGAAAACGAGTTTCATTACTTAGATCCTAATACATCTGTAGACGGCAATATGGATATGGATGAATCTTTCAATGATATCTCAGACGTTATGAATGTACAATTTGAAATGCAACCGCTTAACTTACAGACTCAGCACGGGGAGGATAAGTACGACTTTATTGATAACAGAAGCATAAATGATTCGAAAAAACCTAAGAAAACGTTGTGGAAATGCAAAAAGTGCAACTACAAGGACCCATCCAGAGAAGCATTGTTGGAGCATGTGCGTGAGCACTCCAGATCGGACACGGTTCCGGAAGAACCGCACAAACCGGCTGTTAATAAGAAATCTGAAAACACCCCGGATCCGGCCGATCTGGCGTACCGCTGCGGACATTGTAACCAATTATCCAATTGGAAGCATGTTATCCAGCGTCATTGCCGGTTAAAACACAATGGTGTCATAAAAGTTATAACTACAGTGAAGCCAAAACCCGATCCAGTGTTGAATATAAACGAGATCAGCAGCGACACTTGCAACAAGTGTCCGTACAGATCGAGCGACAAGAAGCAACTGATCGCGCATCTGCAACAACACCAACCCTCCCCGCATTCCATATTCAAATGTTACTTCTGCCCATACTTCGTCAAGGATGAACCAGAGCTAATCCAACATCTTCTGCTTCACGGGATCACCGACCCAGAAGACTATATATCAAACGCAATGGGAACCAAATCCCCAGTACCAGAGCCGCAAACAACGGTAGCTCCCTCAACAGCATCCACCAAACGACACAAATGCACTGAGTGTCCGTATGAAACAAACAGCAAGTCACAGTTCATGTACCACGAACAGTTTCATCGATTGCCAGCCGATACGCCATACAAATGTCCCGAGTGCAACTACAGCGTATCCAAGAGACATTTATTACACCAACATCTGAGAGTACACGGTATAGCAGCCAAACGCATTGAATCAGAGGCAGAATTAGAAGCATCTTCATCACTCCAAAACAAAACAGACTCAAAAGATTTTATAAATCTTGAAGAAACGCCATATGTCTGGGTCTCAGCGAAAAACGAGTTTCATAAAATGTACAAATGTCGATACTGTTCCTACGTTAATTCTCAAAAGTGTAAGCTTCCAAATCATGAAAAAATACATTGCTATGTATTTGAGAACAATGATACAACTCTTTATAAGTGCTTAGAATGCAAATTTACGTGTGATAGCGCCGGAAGACTCGCAGAACATTCCAAATCCCACGGCGAAATATACGGCCGCATCTATTGTCCCGTTGAGGACGATGTTCCGGATGAAGAACAAATTACTAAATTAAGAAAAGTTATAGAAATTGAAAAATTATCAAACGCAGAATTGTCCAAGGACGAAAATTCTGCAAACGAAAATCGTGAAATTAAGTTGTTATATTTCTGTAAAAAATGTCCATCAAGGTTCTTTGATGAAAGTGATTTACAAACTCATGACAAGTATCATGATTTAACGCATGCTAATAAATGTAGGAGTTGTGAATTTTCTGTTCCCGAAGATGATCAATTGGCAGCACATTTTAACGTTCACACCGACGAATATCACACTAAAACAAAGATGCTTAAATTTATTCACAATTCACATCCTTCTCACAAGGAGCCCGTCGTTGAACTTGTTCACTGTCAATCTACATCAGAGATTACGTGGATAGTGTCGAGTCCGAGTAACGAAAGTGTTATGAAAAGGTCCCATGAAGGCAAGGGTGTGCCAAAGCAATATTATTGCAAACAATGCCCAGCAAAGTTTTTCAAAGGCTCAGCTCTTAGTTATCACTTGGGCCTACATGGAGGTGAAGGTGACCATAAATGTAAGAAATGTAACTACGCTGTGAAGAACATAGGAAACTTAGCTAAACACGAAATGTTACATGACACTGAAAACAAAGTAAGCAACTGTGATTACGAGTCTGGTGAAGACATGGACTATAAAAATATTCCACTATCAGGCACAGATTTATTCCAGAGAAAGACGGAGGCTCAAAAACGAGTCTTAACTGATAAGGACAAACTTGTTAAGCCAAATGATCATTTCCCACCTGTCTTACAAGCTGATCCACAATTCGGTTATTTGATGCACGGTAATCCTGAATTTATATACCCAACATATCTCAAAAATGGACGCCAAAAAGAAAAGCGATATAAATGCCATAAATGCCCATCCGCATTTGAAAAAAGAGAACAATATAAAATCCATCTATCTCTACATGGTTCCAAACAAAGATACAAATGTGAGTTGTGTGATTATTCCGTTAAATATTACGCTAACTACGTCCAGCATATGAGGAAACATCAAATGAACGATGAAGCGCAGGCTGAAAGAAAAAAAGAAAACAGCGATTATGTGGAACCCGAAAATCAAGAAGATGTGAAACCAGATGACAGTTGTGATAATATTAAACTCGCAATCAAAACAATGCCTAAAGGAGCAAAAAGTGACTTCCAACAATTCTCAATCAGCGATCAACAAACTCTTCGACTGTTGCAGAGAAGACGGTCAATAAACAATAACGGCAAGGACACGAGCTTATCTGAAACTTCGCCAATTAAAGAGCGTAAAATGCACATGTGTTTGCTATGCCCATACACAAATCAGCGACAAGATTCTTTGACTAATCACTACAGAAGGCACGGCGACGCCGATGTATTCAACGCAGGAAGCCATAAATGTTCTCATTGTGACCTAGTAGTCGTGCAATCACATTTCTTACGAGAACATTTAAGAACGCACTTCAATTTCCACAAAACACTCAATCCGGAATGTTTCGTGGCTAACGATGATGTTAGCTTTACCATTACCAAGATGGAAGAAGACAGTCAGCCAGTTGATCTCAAGTTAGACATGCAAAACAAGAGTTTTACGTGCAATGGTGAAAAAATATTTGTGAAAATTAAAACAGGTGAACTTTTGGTAGAATAA
Protein Sequence: MGLQYAEREIASCKSDSNDATASDNNFKKDSSQLSQDVYSQLSPNLSNELHKQSRKIPRPIPQLIPLNTSTPNQKQCSGEPPTKRFKESSPTENDKDDLSSDVMLVPVNSNPSTKETAGRKKNESFFDRLKERLLTETGEEGSLICKICGFESKCLSEHSVHEKNCSPLSNRITANTSLTSLSSTRCQNCRHRCKSSADLYIHMQTCGNKKVEDENAVQNQDSNDTIIPIHEKEAEPHPMENVVFVWNNINQETNKFEVPLDININDDCTLPELHRSFEAEIVDENETMNLSPSQAIGRKVFKCPHCPFFSTTASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPEHNDAKVLMTDETGRRNYSKYNKFLAMPVLNENGENEFHYLDPNTSVDGNMDMDESFNDISDVMNVQFEMQPLNLQTQHGEDKYDFIDNRSINDSKKPKKTLWKCKKCNYKDPSREALLEHVREHSRSDTVPEEPHKPAVNKKSENTPDPADLAYRCGHCNQLSNWKHVIQRHCRLKHNGVIKVITTVKPKPDPVLNINEISSDTCNKCPYRSSDKKQLIAHLQQHQPSPHSIFKCYFCPYFVKDEPELIQHLLLHGITDPEDYISNAMGTKSPVPEPQTTVAPSTASTKRHKCTECPYETNSKSQFMYHEQFHRLPADTPYKCPECNYSVSKRHLLHQHLRVHGIAAKRIESEAELEASSSLQNKTDSKDFINLEETPYVWVSAKNEFHKMYKCRYCSYVNSQKCKLPNHEKIHCYVFENNDTTLYKCLECKFTCDSAGRLAEHSKSHGEIYGRIYCPVEDDVPDEEQITKLRKVIEIEKLSNAELSKDENSANENREIKLLYFCKKCPSRFFDESDLQTHDKYHDLTHANKCRSCEFSVPEDDQLAAHFNVHTDEYHTKTKMLKFIHNSHPSHKEPVVELVHCQSTSEITWIVSSPSNESVMKRSHEGKGVPKQYYCKQCPAKFFKGSALSYHLGLHGGEGDHKCKKCNYAVKNIGNLAKHEMLHDTENKVSNCDYESGEDMDYKNIPLSGTDLFQRKTEAQKRVLTDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEAQAERKKENSDYVEPENQEDVKPDDSCDNIKLAIKTMPKGAKSDFQQFSISDQQTLRLLQRRRSINNNGKDTSLSETSPIKERKMHMCLLCPYTNQRQDSLTNHYRRHGDADVFNAGSHKCSHCDLVVVQSHFLREHLRTHFNFHKTLNPECFVANDDVSFTITKMEEDSQPVDLKLDMQNKSFTCNGEKIFVKIKTGELLVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01342576;
90% Identity: iTF_00186705; iTF_01222046; iTF_00327448;
80% Identity: -