Basic Information

Insect: Chrysodeixis includens
Gene Symbol: -
Assembly: GCA_941860345.1
Location: OW796092.1:9062621-9071949[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 3.2 2.5e+02 2.8 0.9 1 23 54 77 54 77 0.94

2 20 0.1 7.8 7.5 4.6 1 23 84 107 84 107 0.97

3 20 4.4 3.4e+02 2.3 4.0 1 23 188 210 188 210 0.96

4 20 0.0015 0.12 13.2 1.0 2 23 216 237 215 237 0.97

5 20 1.8 1.4e+02 3.5 1.4 1 23 243 265 243 266 0.94

6 20 0.18 14 6.7 3.4 2 22 499 519 498 519 0.95

7 20 0.076 5.8 7.9 2.6 1 23 614 636 614 636 0.95

8 20 0.85 65 4.6 0.3 2 23 773 794 772 794 0.95

9 20 0.00077 0.059 14.2 0.6 2 23 874 895 873 895 0.96

10 20 0.045 3.4 8.6 0.2 1 23 903 925 903 925 0.97

11 20 0.082 6.3 7.8 3.6 1 23 961 983 961 983 0.95

12 20 0.00021 0.016 15.9 4.0 1 23 991 1013 991 1013 0.99

13 20 0.064 4.9 8.1 2.1 1 23 1097 1119 1097 1119 0.98

14 20 0.33 25 5.9 2.0 1 19 1175 1193 1175 1197 0.91

15 20 0.0085 0.65 10.9 0.6 1 23 1288 1310 1288 1310 0.95

16 20 0.0033 0.25 12.2 1.2 1 23 1316 1338 1316 1338 0.96

17 20 0.0059 0.45 11.4 2.6 1 23 1428 1450 1428 1450 0.97

18 20 0.00015 0.011 16.4 1.4 1 23 1456 1478 1456 1478 0.99

19 20 0.29 22 6.0 2.9 1 23 1569 1591 1569 1591 0.96

20 20 0.0035 0.27 12.1 5.5 1 23 1601 1623 1601 1623 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	3.2	2.5e+02	2.8	0.9	1	23	54	77	54	77	0.94
2	20	0.1	7.8	7.5	4.6	1	23	84	107	84	107	0.97
3	20	4.4	3.4e+02	2.3	4.0	1	23	188	210	188	210	0.96
4	20	0.0015	0.12	13.2	1.0	2	23	216	237	215	237	0.97
5	20	1.8	1.4e+02	3.5	1.4	1	23	243	265	243	266	0.94
6	20	0.18	14	6.7	3.4	2	22	499	519	498	519	0.95
7	20	0.076	5.8	7.9	2.6	1	23	614	636	614	636	0.95
8	20	0.85	65	4.6	0.3	2	23	773	794	772	794	0.95
9	20	0.00077	0.059	14.2	0.6	2	23	874	895	873	895	0.96
10	20	0.045	3.4	8.6	0.2	1	23	903	925	903	925	0.97
11	20	0.082	6.3	7.8	3.6	1	23	961	983	961	983	0.95
12	20	0.00021	0.016	15.9	4.0	1	23	991	1013	991	1013	0.99
13	20	0.064	4.9	8.1	2.1	1	23	1097	1119	1097	1119	0.98
14	20	0.33	25	5.9	2.0	1	19	1175	1193	1175	1197	0.91
15	20	0.0085	0.65	10.9	0.6	1	23	1288	1310	1288	1310	0.95
16	20	0.0033	0.25	12.2	1.2	1	23	1316	1338	1316	1338	0.96
17	20	0.0059	0.45	11.4	2.6	1	23	1428	1450	1428	1450	0.97
18	20	0.00015	0.011	16.4	1.4	1	23	1456	1478	1456	1478	0.99
19	20	0.29	22	6.0	2.9	1	23	1569	1591	1569	1591	0.96
20	20	0.0035	0.27	12.1	5.5	1	23	1601	1623	1601	1623	0.98

Sequence Information

Coding Sequence: ATGCTACAGCAGATGTCCTCGCCGCCGAGCGCACAAGCCGGCGAGGTCGCGACTGTCGTGCGCCACCTTGAAGGCCGCCTCTGCGGCGACGTGTCTTCGGAGGCTTCCTCGGACGCCGCGGAAGATTCAGAATTACCACAGTGCAAGATAAGGAGGAACTATAATTGCACAAAGTGCACGTTCTATACGCAGAACCCGCGCGCTTATCTCATCCACACGCGTGACGCTCACTTTGTCAAACTCAAGATTTACGATTGTCCACACTGTGTTTACGCTTCGAGACATCATCAGAAACTTATGAGACACGTTAAAATGGTGCATGGAGGCTCAATGACGGCATCAGCTGTTAAAATGGATTCGGAGTTATCACCACCATCCTACGAAAACATGGAGCAAACAGAACGCATAGAAGATATGTTAGAGGAAGTCGAGGACTGCGATGATTTGATGATGGAAGTGGACGAGGACTCCTCGGACCGGCCAGACGACGTCGACGTCGACTGTGACAGGACGGTTGACCAAGCAGCGCCATCCGACTTATCCAAAACTAAAGGCAAATTCTTCTCATGCGATAAGTGCAACTATGTCACTCACATAAGAGCTAGATTCACAAAGCACGTCAAGTATCATTCGATGCCTATGATTAAGTGTACAATGTGTGATTTCCGAACACCATATAAGTGGAACTTGGACCGTCACATGAAGAATCATGGTGGAAGTGGAAGTTTCAATTGTTCAATGTGCAACTTTACGGCGGACATCAAGCAGAGTCTGACGGTGCACGAAATGAATCATCACACACCGCCAGTGGGCCAATCGCTGTCGAGTCGCCGCCGCAACCGGGTGGGCGCCAGCGACACGGTTATCGCGGAGAGCGACGCAGCGAGCGCGTTGCTCCCCAAGGAGGAAGAAGGGAGCGGCGACTCGCAGTCCTCGCACTCGGTCTCGGATATGGGTCTACAGTACGCAGAGAGAGATATAGCCAGCTGCAAAAGCGACTCCAACGATGCCACAGCTTCAGATACCAACTCCAAAAAAGACGCATCGCAAGATGTGTACAACCAGCTATCACCTAACCTGAGCAATGAGCTACAGAAACAGAGTAGAAAAATTCCCAGACCAATACCACAGCTAATACCTTTAAATACTTCCACTCCCAACCAGAAACCATGTTCCGGTGAACCACCAAGTAAGAGGTTCAAGGAAAGTCCAACGGATGTGAACGATAAAGAAGATCTGTCTAGTGATGTTATGTTACCTGTTAGTAGCAATACATCCACTAAAGAAACCACAGGCCGTAAGAAAAATGAATCATTCTTCGACCGATTAAAAGAAAGACTATTAACTGAAACGGGCGAAGAGGGATCTTTAATATGCAAAATCTGTGGCTTTGAAAGTAAATGCTTATCGGAACATTCAGTGCATGAGAAAAATTGTTCACCGCTAAGTAATCGGATAACTGCGAATACATCGCTTACCAGTTTGAGCTCTACTCGATGCCAAAACTGCAGGCATCGATGTAAATCTAGTGCTGATTTGTACATTCACATGCAAACTTGCGGAAATAAAAAGCAAGTTGAAAACGCAGCTCAAAATCAAGACAGTAATGACACAATCATTCCGATACACGAAAAAGAGGCAGAACCGCATCCGATGGAAAATGTTGTTTTTGTTTGGAACAATATAAACCAGGAGACAAATAAATTTGATGTGCCTCTAGACATAAACATCAACGATGATAGCACGCTTCCAGAGTTACACAGAAGCTTTGAAGCTGAGATTGTTGACGACAATGAAAGCATGAATTTATCGCCGAGCCAAGCTTTTGGACGAAAGGTATTTAAATGTCCACATTGTCCTTTTTTCTCTACAACTGCATCCAGATTTCACGTTCATATTGTAGGACACTTGAATAAAAAACCATTCGAGTGTTCTCTTTGCAAATATAAATCCAATTGGAGATGGGATATTACTAAGCATATTAAGTTGAAGTCCGCGAGAGACCCGGAGCACAACGATGCGAAGGTGTTAATGACTGACGAAACCGGAAGGAGAAACTATAGCAAATATAACAAATTCTTAGCAATGCCGGTTTTAAATGAAAATGGTGAAAACGAATTTCATTACTTAGATCCTAATACATCTGTAGATGGCAATATGGATATGGATGAATCTTTCAATGATATCTCAGATGTTATGAATGTACAATTTGAAATGCAACCGCTTAACTTACAGACTCAGCACGGCGAGGATAAGTACGACTTTATTGATAACAGAAGCATAAATGAGTCGAAGAAACCTAAGAAAACGTTGTGGAAATGTAAAAAGTGTAACTACAAAGATCCATCCAGAGAAGCATTGTTGGAGCATGTTCGAGAGCACTCCAGGAGTGACGGGGCGCCCGAAGAACCGCACAAACCGCCAGTCAATAAGAAATCAGAAAACACCCCAGACCCAGCGGATCTGGCGTATCGCTGCGGCCATTGTAACCAATTATCCAATTGGAAACATGTCATCCAGCGTCATTGTCGCCTAAAACACGATGGTGTCATAAAAGTAATAACAACAGTGAAACCAAAACCGGATCCGGCAATGAACATTAACGACATCAGCAGCGACACTTGCAACAAGTGTCCGTACCGATCGAGCGACAAGAAGCAACTGATCGCTCATCTGCAACAACACCAGCCCTCCCCGCATTCCATATTCAAATGTTACTTCTGCCCGTACTTCGTCAAGGATGAACCAGAGCTAATCCAACATCTACTGCTGCATGGTATCACAGACCCAGAAGACTACATATCGAGAGCAATGGGAACTAAGTCCCCTGTACCCGAGCCGCAAACATCAACAACTCCTTCAATGGGGTCTACAAAACGCCATAAGTGCACCGAGTGTCCATACGAAACAAATAGCAAGTCGCAATTTATGTACCATGAACAATTTCATCGATTACCCGCAGACACGCCTTACAAATGTCCCGAGTGCAACTATAGCGTATCCAAAAGACATTTACTACACCAACACTTGAGAGTACACGGCATAGCAACTAAACGAATGGAATCTGAGGCCGAATTAGAAGCATCTACATCGTTACAAAATAAATCAGATTCCAAAGATTTTCAAATAAATCTAGATGAAACGCCATATGTTTGGGTGTCAGCAAAGAACGAGTTTCACAAGATGTACAAGTGTCGATACTGTTCATACGTCAATTCCCAAAAGTGTAAGATTCCAAATCATGAAAAAATACATTGCATTGTATTTGAAAACAATGAAACAACTCTTTACAAGTGCTCAGAATGCAAATTCACATGTGATAACGCCGGAAGACTAGCAGAACATTCCAAATCCCATGGCGAAATATACGGCCGTATCTATTGTCCAGTAGAGGACGATGTCCCGGACGAAGAACAAATTTCAAAATTAAGAAAAGTTATAGAAATCGAAAAATTATCAAATCCCGACGGTTCCTTCAAAGACGAAAATTCAACAAGTGAAAATCGTGAAATAAAGATGTTATATTTTTGTAAAAAGTGCCCATCAAGGTTCTTTGACGAAAGTGAATTATATGCTCATGACAAGTATCATGACTTATCGAATATTAACACATGTAGGAGCTGTGAATTTTCTGTCCCAGAAGATGATCAGTTGGCAGCACATTTTAGCGTTCACACTGACGAATATCACACTAAAACAAAGATGCTTAAATTCATTCACAATACCCATCCTTCTCACCGAGAGCCCGTCGTAGAACTCGTGCACTGTCCAGCTACTTCAGAGATCACTTGGATAGTGAGCAGTCCGAGCACCGAGAGCATCGTCAAAAAGTCAAATGACGGGAAAAGTGTGCCAAAACAATATTATTGTAAACAATGCCCAGCTAAGTTTTTCAAAGCATCTGCACTTACTTATCACTTAGGCCTGCATGGAGGTCAAGGAGAACATAAATGTAAGAAATGTAATTACGCTGTGAAAAACATAGGGAACCTAGCCAAACATGAAATGCTACATGAACATGAAAATAAGTCTAACAACTGCGATTATGAGTCGGGCGAAGACATGGACTATAAAAATATTCCACTGTCAGGTACAGATTTATTCCAGAGAAAGACAGAAGCTCAGAAACGTGTCTTGACGGATAAAGATAAACTTGTAAAACCAAATGATCATTTCCCACCTGTCTTACAAGCAGATCCGCAATTCGGTTATTTAATGCACGGTAACCCTGAATTTATATATCCGACATACCTCAAAAATGGACGCCAAAAGGAAAAGCGATATAAATGCCACAAATGCCCATCTGCATTTGAAAAGAGAGAACAATATAAAATACATTTATCTCTACATGGTTCCAAACAAAGGTATAAGTGCGAGTTGTGTGATTATTCCGTTAAATATTATGCTAATTACGTCCAGCATATGAGAAAACATCAAATGAACGATGAAGCACAAGCAGAAAGGAAGAAAGAAAACAGTGATTATGTAGAGCCTGAAAATCAAGAAGATGTGAAACAAGATGACAGTTGTGATAACATCAAACTCGCGATCAAGACGATGCCCAAAGGAGCTAAGAGTGACTTCCAACAATTCTCAATAAGTGATCAGCAAACTCTTAGACTGTTGCAGAGAAGGCGGTCAATAAACAATAACACTAAGGACCCAAGTGCAGCTGAAGTATCGCCAACGAAAGAGCGTAAAATGCACATGTGTTTACTATGCCCGTACACTAATCAGCGACAGGATTCCCTAACCAATCACTACAGGAGGCACGGCGACACAGATTTCAATGCAGGAACTCATAAATGTTCTCACTGTGACCTCGTCGTTGTGCAGTCGCATTTCCTCCGGGAACATTTAAGAACGCACTTCAATTTCCACAAAACACTCAACCCAGAATGTTTCGCGGCTAACGAGGATGTTAGCTTTACCATTACCAGGATAGAAGATGACAGTCAGTCAGTTGATCTCAAGTTAGACATGCACAACAAAGGTTTTTCGTGCAATGGTGAAAAAATATTTGTGAAAATAAAAACAGGTGAACTATTGATAGAGTAA
Protein Sequence: MLQQMSSPPSAQAGEVATVVRHLEGRLCGDVSSEASSDAAEDSELPQCKIRRNYNCTKCTFYTQNPRAYLIHTRDAHFVKLKIYDCPHCVYASRHHQKLMRHVKMVHGGSMTASAVKMDSELSPPSYENMEQTERIEDMLEEVEDCDDLMMEVDEDSSDRPDDVDVDCDRTVDQAAPSDLSKTKGKFFSCDKCNYVTHIRARFTKHVKYHSMPMIKCTMCDFRTPYKWNLDRHMKNHGGSGSFNCSMCNFTADIKQSLTVHEMNHHTPPVGQSLSSRRRNRVGASDTVIAESDAASALLPKEEEGSGDSQSSHSVSDMGLQYAERDIASCKSDSNDATASDTNSKKDASQDVYNQLSPNLSNELQKQSRKIPRPIPQLIPLNTSTPNQKPCSGEPPSKRFKESPTDVNDKEDLSSDVMLPVSSNTSTKETTGRKKNESFFDRLKERLLTETGEEGSLICKICGFESKCLSEHSVHEKNCSPLSNRITANTSLTSLSSTRCQNCRHRCKSSADLYIHMQTCGNKKQVENAAQNQDSNDTIIPIHEKEAEPHPMENVVFVWNNINQETNKFDVPLDININDDSTLPELHRSFEAEIVDDNESMNLSPSQAFGRKVFKCPHCPFFSTTASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPEHNDAKVLMTDETGRRNYSKYNKFLAMPVLNENGENEFHYLDPNTSVDGNMDMDESFNDISDVMNVQFEMQPLNLQTQHGEDKYDFIDNRSINESKKPKKTLWKCKKCNYKDPSREALLEHVREHSRSDGAPEEPHKPPVNKKSENTPDPADLAYRCGHCNQLSNWKHVIQRHCRLKHDGVIKVITTVKPKPDPAMNINDISSDTCNKCPYRSSDKKQLIAHLQQHQPSPHSIFKCYFCPYFVKDEPELIQHLLLHGITDPEDYISRAMGTKSPVPEPQTSTTPSMGSTKRHKCTECPYETNSKSQFMYHEQFHRLPADTPYKCPECNYSVSKRHLLHQHLRVHGIATKRMESEAELEASTSLQNKSDSKDFQINLDETPYVWVSAKNEFHKMYKCRYCSYVNSQKCKIPNHEKIHCIVFENNETTLYKCSECKFTCDNAGRLAEHSKSHGEIYGRIYCPVEDDVPDEEQISKLRKVIEIEKLSNPDGSFKDENSTSENREIKMLYFCKKCPSRFFDESELYAHDKYHDLSNINTCRSCEFSVPEDDQLAAHFSVHTDEYHTKTKMLKFIHNTHPSHREPVVELVHCPATSEITWIVSSPSTESIVKKSNDGKSVPKQYYCKQCPAKFFKASALTYHLGLHGGQGEHKCKKCNYAVKNIGNLAKHEMLHEHENKSNNCDYESGEDMDYKNIPLSGTDLFQRKTEAQKRVLTDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEAQAERKKENSDYVEPENQEDVKQDDSCDNIKLAIKTMPKGAKSDFQQFSISDQQTLRLLQRRRSINNNTKDPSAAEVSPTKERKMHMCLLCPYTNQRQDSLTNHYRRHGDTDFNAGTHKCSHCDLVVVQSHFLREHLRTHFNFHKTLNPECFAANEDVSFTITRIEDDSQSVDLKLDMHNKGFSCNGEKIFVKIKTGELLIE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01231174;
90% Identity: iTF_00185711;
80% Identity: -