Basic Information

Insect: Autographa gamma
Gene Symbol: -
Assembly: GCA_905146925.1
Location: LR989864.1:10173675-10180854[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.00062 0.056 14.5 1.8 1 23 267 289 267 289 0.98

2 12 0.0003 0.027 15.4 4.3 2 23 297 318 296 318 0.96

3 12 0.72 65 4.8 0.3 1 23 322 344 322 344 0.93

4 12 1.1e-05 0.001 19.9 1.8 1 23 349 372 349 372 0.97

5 12 0.00051 0.046 14.7 0.2 1 23 376 399 376 399 0.94

6 12 0.0035 0.32 12.1 0.1 2 20 416 434 415 440 0.92

7 12 0.00011 0.0096 16.9 2.9 3 23 450 471 450 471 0.98

8 12 0.092 8.3 7.6 0.4 2 23 490 512 490 512 0.97

9 12 3e-06 0.00027 21.7 0.8 1 23 523 545 523 545 0.99

10 12 6.2e-07 5.6e-05 23.9 1.3 1 23 551 573 551 573 0.99

11 12 1.6e-05 0.0015 19.4 0.6 1 23 579 601 579 601 0.98

12 12 9.1e-06 0.00082 20.2 0.4 1 23 607 630 607 630 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.00062	0.056	14.5	1.8	1	23	267	289	267	289	0.98
2	12	0.0003	0.027	15.4	4.3	2	23	297	318	296	318	0.96
3	12	0.72	65	4.8	0.3	1	23	322	344	322	344	0.93
4	12	1.1e-05	0.001	19.9	1.8	1	23	349	372	349	372	0.97
5	12	0.00051	0.046	14.7	0.2	1	23	376	399	376	399	0.94
6	12	0.0035	0.32	12.1	0.1	2	20	416	434	415	440	0.92
7	12	0.00011	0.0096	16.9	2.9	3	23	450	471	450	471	0.98
8	12	0.092	8.3	7.6	0.4	2	23	490	512	490	512	0.97
9	12	3e-06	0.00027	21.7	0.8	1	23	523	545	523	545	0.99
10	12	6.2e-07	5.6e-05	23.9	1.3	1	23	551	573	551	573	0.99
11	12	1.6e-05	0.0015	19.4	0.6	1	23	579	601	579	601	0.98
12	12	9.1e-06	0.00082	20.2	0.4	1	23	607	630	607	630	0.98

Sequence Information

Coding Sequence: ATGGACCTTGTAAAAGTTTGTCGTATTTGTCTAAATATGAATGTGAAATTGCATAACTTGCAGGCTTTTCCATTAGACTCATATTATGATTCAGTTATAGGCAACAATTTGCTGTACACAACCAGTTTGCCACCTTATGCCTGCTTTGAGTGTGCTCAACTGTTAAGAAAGTTTTATAACTTCAAACAAAAAAGTTTTAAAAGCCAGACTGCTCTTATTGGAATTCTTAATAAGTTTGGAGAGCTATCACCTTCAGAAATAGAACAATTAAAAAGGCAGAGCCTGCTAGAAACTGTTAGTAACCCAAACATTTCTATACAAGGAGGAATCAACACACACATTGAAATCAAAACTGAACACAATGTGTTAGAGAAAGGCATTGATTGTTTAGATGATGTGATAAAAGTGGAGAATGATGATTACTTATCACCGTGCCCAGTGTCGAGTGATGATGATGAGCCGTTAGCACACCATAAAGAGAAGAAGGTGCAACATGAGATACAGATTGAGAAGTTTGATATGAAAGAAGATTTGGAGGGGATTGATTTTATAGAATCGAACGAAGACCATTCACAATCATTACCAGAAATTAGTGAAAATTTGGTTATAGTAAAGAAAACAAAAGGCCGCAACAAAAAGACGACGAGTGCGTCGAAACCCAAGAAAGCTACCAAAAGTATTAAGAACATCAGTAATGACGAAATCAGAGATTTTATAACAGTTATCACTTTGTCGGAAGCAGAGCAGATAGAAGAGGTACAGAAACGTAAAACCACATCGAATTATCTGAACTCTCCGTACCAGTGTGAATTGTGCTTCAAAGGGTTCATTCATCCCGACGCTTGGAACCATCATGTTTCTAAACATTCGCCGAGTGCAGGCGACATAGAGTGTCATATCTGCAAGTTCAGGTTCAAGACGAAAAGGGCATTCAACAAGCATTTATCCTCGCACGAGAAGAAGTATTCCTGTAAATCCTGTCCATACATATCTACTAATATGACTCAAGCAAAGCAACACCTAGGCTGGCATAACGGAGTTACCTTCAACTGTAAACATTGCGGAGAAATATTTACTGTCTGGACATCATACATGAGTCACATGCGCATCAAGCACCCGTCGGAGTTCATATGCGGCATCTGCGGGTACTCCTTCATCAGCAAGCTGGGCCTCACCATGCACAAGACTATGATGCATAAAGATGTTTTGGAAAAATCATCGGAAGTGAAAGAAGAGGAAGGTCTGTATTGCGCGGAGTGTGACGTCAAGTTTATATCGGCGAAGGCTTACAAGCGACACATGGTCATGTCCGTCAAGCACACCAGCAGTATGGACTCTGTTAAAGGCTGTAGAAATTGTGGAGAAACCTTCAAGACATCAGAGGAACTAAGGCTCCACCATCGTAAGGAGCACACGAGAACTAGGCCCAAGAACTATGGGAAGAAACAGTCTAACGCATGGCCAGCTAAGTGTGAACATTGTGAGGAGGAGATCTCGGACGCGCGCGCGTACTGGTCGCACTTCCGGCGCGCGCACCCCGACCAGCACTACCCCGTGCAGAAGGACTACGTCTGCGATGTCTGCGGGAAGAGCTTCCGGGGCAACGCGTTCCTAACGTACCACAAGCGCACGCACAGCTCGGAGCGCGCGTACAAGTGCGCGACGTGCGGGAAGGCCTTCTACAACCGCACCAACCTGCAGATGCACGTCAAGACGCACTCCGACGACCGGCCCTACCCCTGCTCTGTCTGCTTCAAGGCTTTCAAGGGCAAGGGGGCGCTTAATAGGCATTTTAGAAGCCACACCGGCCAGAAGCCGTACGAGTGCGAGGTGTGCGGCAAGGGTTTCTCACAGTCCAACAGCCGCAAGCTGCACGTACGCACCGTGCATCTCAAGCAACCCTCGCCTTATCTTAGTAGAGCACGCAGCGAGAGACGGGGCAAGCCGCCGCCGAAAGACGAAGCTACACAGTTCATATACTAG
Protein Sequence: MDLVKVCRICLNMNVKLHNLQAFPLDSYYDSVIGNNLLYTTSLPPYACFECAQLLRKFYNFKQKSFKSQTALIGILNKFGELSPSEIEQLKRQSLLETVSNPNISIQGGINTHIEIKTEHNVLEKGIDCLDDVIKVENDDYLSPCPVSSDDDEPLAHHKEKKVQHEIQIEKFDMKEDLEGIDFIESNEDHSQSLPEISENLVIVKKTKGRNKKTTSASKPKKATKSIKNISNDEIRDFITVITLSEAEQIEEVQKRKTTSNYLNSPYQCELCFKGFIHPDAWNHHVSKHSPSAGDIECHICKFRFKTKRAFNKHLSSHEKKYSCKSCPYISTNMTQAKQHLGWHNGVTFNCKHCGEIFTVWTSYMSHMRIKHPSEFICGICGYSFISKLGLTMHKTMMHKDVLEKSSEVKEEEGLYCAECDVKFISAKAYKRHMVMSVKHTSSMDSVKGCRNCGETFKTSEELRLHHRKEHTRTRPKNYGKKQSNAWPAKCEHCEEEISDARAYWSHFRRAHPDQHYPVQKDYVCDVCGKSFRGNAFLTYHKRTHSSERAYKCATCGKAFYNRTNLQMHVKTHSDDRPYPCSVCFKAFKGKGALNRHFRSHTGQKPYECEVCGKGFSQSNSRKLHVRTVHLKQPSPYLSRARSERRGKPPPKDEATQFIY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00186503; iTF_00327273; iTF_01221833; iTF_01487932;
90% Identity: iTF_00186503;
80% Identity: -