Basic Information

Insect: Plusia festucae
Gene Symbol: -
Assembly: GCA_950381575.1
Location: OX494448.1:1051416-1062057[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.00074 0.063 14.5 1.8 1 23 268 290 268 290 0.98

2 12 0.0003 0.025 15.7 4.3 2 23 298 319 297 319 0.96

3 12 0.13 11 7.4 0.2 1 23 323 345 323 345 0.94

4 12 4.5e-06 0.00038 21.4 2.2 1 23 350 373 350 373 0.98

5 12 0.00062 0.052 14.7 0.2 1 23 377 400 377 400 0.94

6 12 0.011 0.96 10.7 0.2 2 20 418 436 417 442 0.92

7 12 0.00013 0.011 16.9 2.9 3 23 452 473 452 473 0.98

8 12 0.17 14 7.0 0.8 2 23 492 514 492 514 0.97

9 12 1.2e-05 0.001 20.1 0.5 1 23 525 547 525 547 0.98

10 12 7.8e-07 6.6e-05 23.8 1.8 1 23 553 575 553 575 0.99

11 12 3.5e-05 0.0029 18.6 0.8 1 23 581 603 581 603 0.98

12 12 3.9e-06 0.00033 21.6 0.7 1 23 609 632 609 632 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.00074	0.063	14.5	1.8	1	23	268	290	268	290	0.98
2	12	0.0003	0.025	15.7	4.3	2	23	298	319	297	319	0.96
3	12	0.13	11	7.4	0.2	1	23	323	345	323	345	0.94
4	12	4.5e-06	0.00038	21.4	2.2	1	23	350	373	350	373	0.98
5	12	0.00062	0.052	14.7	0.2	1	23	377	400	377	400	0.94
6	12	0.011	0.96	10.7	0.2	2	20	418	436	417	442	0.92
7	12	0.00013	0.011	16.9	2.9	3	23	452	473	452	473	0.98
8	12	0.17	14	7.0	0.8	2	23	492	514	492	514	0.97
9	12	1.2e-05	0.001	20.1	0.5	1	23	525	547	525	547	0.98
10	12	7.8e-07	6.6e-05	23.8	1.8	1	23	553	575	553	575	0.99
11	12	3.5e-05	0.0029	18.6	0.8	1	23	581	603	581	603	0.98
12	12	3.9e-06	0.00033	21.6	0.7	1	23	609	632	609	632	0.98

Sequence Information

Coding Sequence: ATGGAACTTGTAAAAGTTTGTCGCATTTGTTTAAATATGGATGTGAAGTTGCATAACTTGCAGGCGTTTCCATTAGAATCATACTATGATTCAGTTATAGGGAGTAATTTGCTGTACACAACCCATTTGCCTCCATATGCCTGCTATGAGTGTGCTCAGTTATTGAGAAAGTTTTAttcattcaaacaaaaaagtttggAGAGTCAAGCAGCCCTTGTTGGAATAGTTGATAAGTTTGGAAAGctatCCTCTTTAGAAATAAAACGATTGAAAAGGCAGAGTCTATTGAAAACTGTTACTCTTCCCAATGTTTGTCTACAAGGAGAAAACTTGGATAGTAATGACgatataacaattaaattagaaCATAATGTACTAGAGAAAGGCATTGATACTTTAGGTGACATTATAAAAGTGGAGAATGATGACTTCTTATCACCAGCTCCATTATCTAGTGATGATGATGAACCATTATCTCTTCATAAGGAGAAGAAAGTGCAGCATGTTGTTGAGATAAAGTTTGATATGAAAGAAGATTTGGACAGTATTGATTTTATCGAATCTAATGAGGATCACTCACAATCTCTTCCGGATATTGGAGAACTTTTAGTGACGAAGAGAAAAGGCCGTCCGAAGAAGACGACAAGTGTATCAAAGTCCAAGAAAGTcaacaaaaaaagtattaaaaatgaaaataacgaTGACATCAGAGAGTTTATTACAGTTATTTCTTTGTCGGAAGCAGAGCAAATAGAAGAGGTACAGAAACGTAAAACGACGTCCAACTACCTGAACTCCCCGTACCAGTGTGAGCTGTGCTTCAAAGGATTCATACACCCTGATGCCTGGAACCATCATGTCTCGAAACATTCTCCGAGTGCGGGCGATATAGAGTGTCACATCTGCAAGTTTAGGTTCAAGACAAAGCGTGCATTCCAGAAGCATTTGTCCTCCCACGAGAAGAAGTACGCATGTAATACCTGTCCCTACGTGTCTACTAATATGACTCAAGCGAAGCAACATCAAGGTTGGCATAATGGAGTCACGTTTAAGTGCAAACATTGTGGTGAAATCTTTACAGTTTGGACATCGTACATGAGTCATATGCGCATCAAGCACCCGTCGGAGTTCATATGCGGCATATGCGGGTACTCGTTTATCAGCAAGCTGGGGCTCACCATGCACAAGACCATGATGCATAAAGATGTTTTAGAAAAAACATCCGAATTGAAAGAGGAAGAAGAAGGTCTTTATTGCGCAGAGTGTGACGTTAAGTTTATATCAACGAAGGCTTACAAGCGTCACATGGTCATGTCTGTCAAGCACACCAGCAGTATGGACTCAATtaaaggCTGTCGGAATTGTGGGGAAACGTTCAAGACATCAGAGGAACTCAGGCTTCATCATCGTAAGGAACACGCGAGGACAAGACCCAAGAACTACGGGAAGAAACAATGCAACTCGTGGCCCGCGAAATGTGAACACTGCGAGGAGCAGATATCGAGCGCGCGCGCGTACTGGTCGCACTTCCGGCGCGCGCACCCCGACAAGAACTACCCCGTGCAGAAGGACTTCGTCTGCGACGTCTGCGGGAAGAGCTTCCGGGGCAACGCATTCCTAGTGTACCACAAGCGCACGCACTCGGAGGAGCGCGCCTACAAGTGCTCGCAGTGCGGGAAGGCGTTCTTCAACCGCACCAACCTGCAGGTGCACGAGAAGACGCACTCCGATGTGCGCCCGTACCCCTGCTCGCTCTGCTTCAAGGCTTTTAAGGGGAAAGGAGCGCTGAACAGGCATTTTAGAAGCCACACTGGACAGAAGCCGTTCGAGTGCGAAGTGTGTGGCAAGAGCTTCACGCAGTCCAACAGCCGCAAGCTGCACGTGCGCACCGTGCACCTGAAGCAGCCCTCACCCTACCTCAGCCGCGCCCGGCTCGAGCGACGCACCAAGCCCGACAAGGAAGACCCCACACAGTTCTTATACTAA
Protein Sequence: MELVKVCRICLNMDVKLHNLQAFPLESYYDSVIGSNLLYTTHLPPYACYECAQLLRKFYSFKQKSLESQAALVGIVDKFGKLSSLEIKRLKRQSLLKTVTLPNVCLQGENLDSNDDITIKLEHNVLEKGIDTLGDIIKVENDDFLSPAPLSSDDDEPLSLHKEKKVQHVVEIKFDMKEDLDSIDFIESNEDHSQSLPDIGELLVTKRKGRPKKTTSVSKSKKVNKKSIKNENNDDIREFITVISLSEAEQIEEVQKRKTTSNYLNSPYQCELCFKGFIHPDAWNHHVSKHSPSAGDIECHICKFRFKTKRAFQKHLSSHEKKYACNTCPYVSTNMTQAKQHQGWHNGVTFKCKHCGEIFTVWTSYMSHMRIKHPSEFICGICGYSFISKLGLTMHKTMMHKDVLEKTSELKEEEEGLYCAECDVKFISTKAYKRHMVMSVKHTSSMDSIKGCRNCGETFKTSEELRLHHRKEHARTRPKNYGKKQCNSWPAKCEHCEEQISSARAYWSHFRRAHPDKNYPVQKDFVCDVCGKSFRGNAFLVYHKRTHSEERAYKCSQCGKAFFNRTNLQVHEKTHSDVRPYPCSLCFKAFKGKGALNRHFRSHTGQKPFECEVCGKSFTQSNSRKLHVRTVHLKQPSPYLSRARLERRTKPDKEDPTQFLY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00185525;
90% Identity: -
80% Identity: -