Atex003484.1
Basic Information
- Insect
- Atta texana
- Gene Symbol
- Sub1
- Assembly
- GCA_004480015.1
- Location
- QEPB01019910.1:3562-4200[+]
Transcription Factor Domain
- TF Family
- PC4
- Domain
- PC4 domain
- PFAM
- PF02229
- TF Group
- Unclassified Structure
- Description
- This domain is found at the C-terminal end of Activated RNA polymerase II transcriptional coactivator p15 from humans, YdbC from Lactococcus lactis, and other PC4 family members. p15 has a bipartite structure composed of an N-terminal regulatory domain and a carboxy-terminal cryptic DNA-binding domain [1-4]. Activity is controlled by protein kinases that target the regulatory domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.15 4e+03 -2.1 0.8 29 37 36 44 29 44 0.79 2 2 8.1e-28 2.1e-23 82.1 0.5 1 51 53 104 53 105 0.96
Sequence Information
- Coding Sequence
- ATGCCAAAGTCAAAAGAATATGTCTCTGACAGTGATGATAGCAGTGAAgaggAAGTAAAATCAAAGAAGCaaaagagggaaagagaggaTGATAACAAAGCAAcgaaagatgagaaaaaacCGGCAAAGAAGGCTAGAACTGACGATGAAACTGTTTGGGATTTGGGCAACAATCGTCAAgtaaatgtaagaaatttcAAAGGCAAATATTATGTTGATATCCGGGAGATGTATTATGACAAGGAAGGTGATTTAAAACCTGGAAAAaaaggAATATGTTTATCCATGCAACAATGGCGAAAGTTTATGAATGTTGTGAAAGAAGTAGATGAAGTGGCTAAATCGAAGAgttaa
- Protein Sequence
- MPKSKEYVSDSDDSSEEEVKSKKQKREREDDNKATKDEKKPAKKARTDDETVWDLGNNRQVNVRNFKGKYYVDIREMYYDKEGDLKPGKKGICLSMQQWRKFMNVVKEVDEVAKSKS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01229030;
- 90% Identity
- iTF_01476180;
- 80% Identity
- -