Amou041257.1
Basic Information
- Insect
- Athrips mouffetella
- Gene Symbol
- -
- Assembly
- GCA_947532105.1
- Location
- OX383979.1:18154570-18157005[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 6.7e-06 0.0008 21.0 3.1 1 23 10 33 10 33 0.95 2 20 0.00053 0.063 15.0 0.3 2 23 39 61 38 61 0.94 3 20 2.1e-05 0.0025 19.4 0.2 2 23 70 92 70 92 0.97 4 20 1.5e-06 0.00018 23.1 2.1 2 23 101 123 100 123 0.95 5 20 1.9e-05 0.0023 19.6 1.9 2 23 131 153 131 153 0.97 6 20 1e-06 0.00012 23.6 1.8 2 23 161 182 160 183 0.95 7 20 1.1e-06 0.00013 23.5 0.8 1 23 189 212 189 212 0.98 8 20 0.011 1.3 10.9 1.0 1 23 220 243 220 243 0.96 9 20 0.0015 0.17 13.7 1.9 1 23 272 295 272 295 0.95 10 20 0.0021 0.25 13.1 0.5 3 23 330 351 329 351 0.96 11 20 1.6 1.9e+02 4.1 0.4 2 21 359 378 358 379 0.91 12 20 0.01 1.2 11.0 1.6 2 23 388 410 388 410 0.95 13 20 0.034 4.1 9.3 6.9 1 23 433 456 433 456 0.96 14 20 5.6e-05 0.0067 18.1 0.7 2 23 463 485 462 485 0.96 15 20 3.6e-05 0.0043 18.7 2.2 2 23 492 514 491 514 0.94 16 20 0.0084 1 11.3 2.2 1 23 520 543 520 543 0.97 17 20 1.8 2.1e+02 3.9 5.8 2 23 551 573 551 573 0.95 18 20 0.00022 0.026 16.3 0.1 1 23 580 603 580 603 0.98 19 20 0.0042 0.5 12.2 0.6 1 20 610 629 610 633 0.90 20 20 0.02 2.3 10.1 2.7 3 23 648 669 647 669 0.91
Sequence Information
- Coding Sequence
- ATGTTTCAATACTTCAACTCACTCGATTTCGTATGTGACTATTGTAGTCGTCCCTTTACAAGAAAATATAATTTGCAAACTCACATTGAAAACTGTCATATCAATTCTTCCTGCTCATGTGAAGTTTGTGGGCAAACTTTCGGAAGCCCCGCTGGTTTACAGCTGCATTACTCCAGAGGTCACAACAGATACGATCAGCCTCTTCCAGAATGCGACGTTTGTGGTCGAATTTTCACAAGAAAACAAAACATCATGTCCCACATGATAACTGTCCATTTACAGGGACTTGGACCGGAAATTCGGTGTAATACATGTGATAAAAATTTCACAACACTAAGAAATTTAAAAAGACACATGAATCAATTACATAATCCTGATGTTGAGTATCCGACATGTGACGAATGCCACAAAGCTTTTAAAGGCAAGCACTCGTTAATAGCTCACATTCAAACAGCCCATGGCCCTGAAAAAAGCTTAATAAAATGCGATCTGTGTGACAAGGTTTACACTAACAACAGAAATTTGAAAAGGCACATTGAAATGCATCATGGTGAAAAAGAAGAATTTCGGTGCGAAATTTGCCCTAAAGTGTATACTTCAAATCAGAGTTTGAGGCGACACTCTAGAACAGCTCATTGCAATGATAATAACGATGAGTATAAATGTGATTTATGTCAAAAAATGCTTATTGGCAAAGAAAATTTCGATAGTCACATGCAGTTTTATCATAAATGTGAAAGCTCAACTTCAACCTATTCACAAGATGACGACTCTACGTGCTTACAATCTAGCGATGAAGAATTAAGCTTCGATTTTGCTTGCGAAAAATGCGCTAGGTGCTTTAACAACGAACAGTCTTTACGACAACACGTAAAATTAGAACATTCTTTTAAGACTTTCTACAAATATTGCAAGAAATCTCTTTTGAAACAAATCGATAAAAAAGATTGCACTCCGAAGGACGGAAACAAACAAAAGTTTAACAATTGCGAGTTTTGTAGCAACGCTTTTACTAATGTCTACGAACTAAAAGATCACATGAAGATCAATCATGACAAAGAATACTGTCTCTCTACTTGCAACGTCTGTTTCAGCAAGTTCTACAGCAAGGAAGCAATGTTGGAACATAAAAAGATATGTATTCCACCACCTAATGTAAACTCATGTAGTCATTGTGACAAGTTATTTACAGATATATCGAGCCTTGAATTTCACATTAAAATCTTCCATCCTCAAGCACAAATTGCAGATTCTAACATCTCTTCGACAAATGTTGACGATTCTAACGAAGGATCGTTCAAGTGTCGCCACTGCAATCGAGTTTACTACAGTGACAGATCTCTTAAACATCATGTTAAATTGAAACACACTACAGACGAAGCTATGGAGTGCGAGTTCTGCGGTAAAATTTGCAGTAACAAATATTATTTGGCTTCACACATCAAAATAGTCCACTCGGATAATTCTTGGTCGAAATGCGATTATTGTGACAAACAGTTTAAATCTAAAAGAAATATCAGAAGACACATCGAATATACTCATTTAGGTATGCAGAGATACAAATGTATTGAATGTGAAACATTATTTAAAGAAAAAAGAAGCTTACGTAAGCACGTAAGAACCAAGCATCCTGACTCCGCAGTATTTCCACAGTGTCATTTCTGTTACAAAAGATTTGAGTCTGCTAAGTCTTGTAAGATTCATTTAAAGCTGTTACATTCATTCAACATGAATACTTATCCTTGTGATTTATGTTCTGTATCGTTTAGTTCTAAAGAAGCTTTAGACATCCATCTACAAACGAAGCATTTAGCTGAAGATGAGATCTACAAGTGCGAGGAATGTAATCTCGTTTTCAGAGGGCTCGAAAAGTTTGAACGACACAATGATCTCACACACGTAAATATTATGCCTAATATCAAGCAAAAAGTTTTACCTAGATGCATAATTTGCATGAAAGATTTTAGTACAAGAAAAACGCTAAAAAGACATATAAAAAAGTTTCATGAAGGATTTGACGTAGACGAGCTAGCAACTTTTGGATCGCGCAAAAGAGTATTCAATGTTGAATGCGAGGATTGTATTAAAAATTTCAGTGATGACTACTACTTTAAAATCTTTGAAAAGCTGAAACATTCAAGAGAATCTATTATCTTTAAATGTGAGACGTGTAAGTCATCTTACGATACGTTGGAATATTCGGTTCAACGATATAAGATCGTTAATATGGATTTGTATAAGAGCAAAATGATTCTGAGTGAACTCTGTACTGCTGAAATGTCTGAAGAAGAAGCTGGATATTCTGGGTTTGGATATTTACACGAGATGATGGAGCCCGAAAGCACAACGGGCGATAGCCAAGTGAAAATTGAAAAAACCGATGAATTATCTGAGTTAGATAATATAAATATAAAGACTGAACCAACATCGCCTTGA
- Protein Sequence
- MFQYFNSLDFVCDYCSRPFTRKYNLQTHIENCHINSSCSCEVCGQTFGSPAGLQLHYSRGHNRYDQPLPECDVCGRIFTRKQNIMSHMITVHLQGLGPEIRCNTCDKNFTTLRNLKRHMNQLHNPDVEYPTCDECHKAFKGKHSLIAHIQTAHGPEKSLIKCDLCDKVYTNNRNLKRHIEMHHGEKEEFRCEICPKVYTSNQSLRRHSRTAHCNDNNDEYKCDLCQKMLIGKENFDSHMQFYHKCESSTSTYSQDDDSTCLQSSDEELSFDFACEKCARCFNNEQSLRQHVKLEHSFKTFYKYCKKSLLKQIDKKDCTPKDGNKQKFNNCEFCSNAFTNVYELKDHMKINHDKEYCLSTCNVCFSKFYSKEAMLEHKKICIPPPNVNSCSHCDKLFTDISSLEFHIKIFHPQAQIADSNISSTNVDDSNEGSFKCRHCNRVYYSDRSLKHHVKLKHTTDEAMECEFCGKICSNKYYLASHIKIVHSDNSWSKCDYCDKQFKSKRNIRRHIEYTHLGMQRYKCIECETLFKEKRSLRKHVRTKHPDSAVFPQCHFCYKRFESAKSCKIHLKLLHSFNMNTYPCDLCSVSFSSKEALDIHLQTKHLAEDEIYKCEECNLVFRGLEKFERHNDLTHVNIMPNIKQKVLPRCIICMKDFSTRKTLKRHIKKFHEGFDVDELATFGSRKRVFNVECEDCIKNFSDDYYFKIFEKLKHSRESIIFKCETCKSSYDTLEYSVQRYKIVNMDLYKSKMILSELCTAEMSEEEAGYSGFGYLHEMMEPESTTGDSQVKIEKTDELSELDNINIKTEPTSP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00275557; iTF_01501384; iTF_00844615; iTF_01403665; iTF_01403650; iTF_01337085; iTF_01337068;
- 90% Identity
- -
- 80% Identity
- -