Tluc025228.1
Basic Information
- Insect
- Teleiodes luculella
- Gene Symbol
- -
- Assembly
- GCA_948473455.1
- Location
- OX419609.1:739434-741803[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 4.5e-06 0.00032 21.5 4.2 1 23 10 33 10 33 0.95 2 20 0.00028 0.02 15.9 0.3 2 23 39 61 38 61 0.94 3 20 3.3e-05 0.0024 18.8 0.3 2 23 70 92 70 92 0.97 4 20 0.00045 0.033 15.2 1.8 2 23 101 123 100 123 0.95 5 20 0.00011 0.0081 17.1 1.3 2 23 131 153 131 153 0.94 6 20 4.1e-06 0.00029 21.6 5.1 2 23 161 182 160 183 0.95 7 20 1.4e-07 9.8e-06 26.3 0.7 1 23 189 212 189 212 0.98 8 20 0.24 18 6.6 0.3 2 23 221 243 220 243 0.93 9 20 0.00012 0.0086 17.0 1.3 1 23 262 285 262 285 0.97 10 20 0.0002 0.014 16.3 0.6 1 23 314 337 314 337 0.97 11 20 6.7 4.8e+02 2.1 0.6 2 21 345 364 344 365 0.88 12 20 0.042 3 9.0 2.2 2 23 374 396 374 396 0.93 13 20 6.3e-05 0.0046 17.9 2.6 1 23 419 442 419 442 0.97 14 20 2.9e-05 0.0021 18.9 0.7 2 23 449 471 448 471 0.96 15 20 3.4e-05 0.0024 18.8 2.2 2 23 478 500 477 500 0.94 16 20 0.0079 0.57 11.3 2.2 1 23 506 529 506 529 0.97 17 20 1.7 1.2e+02 4.0 5.8 2 23 537 559 537 559 0.95 18 20 2.8e-05 0.002 19.0 0.2 1 23 566 589 566 589 0.98 19 20 0.0012 0.083 13.9 0.7 1 20 596 615 596 619 0.90 20 20 0.018 1.3 10.1 2.7 3 23 634 655 633 655 0.91
Sequence Information
- Coding Sequence
- ATGTTCCACTCTCTGAACACTTTAGACTTTGTGTGTGACTACTGCAGTCGCACGTTTACACGTAAATATAATCTACAAACGCATATAGAAAACTGCCACATAAACTCTTCGTGTTCGTGTGAAATCTGTGGCCAGACTTTTGGCAGTCCCGCCGGCCTTCAACTACATTACTCCAGAGGCCACAACCGGTACAACCAACCGTTCCCGGAATGTGATCTCTGCGGACGTATTTTCACAAGAAAACAAAATATAATGTCCCACATGATAACCGTCCATTTACAGGGCATGGGTAATGAAATCCGTTGTAAACTTTGCATGAAGATATTTACAACTGAAAGGAATTTGAAGAGGCATTTAAAACAGTTGCATAATCCTGCTGTTGAATATCCTACTTGTGACGAGTGCCACAAAGTATTTAAAGGCAAGCAATCATTAATAACTCATATTCAAGCTACTCATGGACCCGATAGAGGCTCGATCAAATGCCACCAGTGTAACAAAGTATATACGAACAACAGGAATTTGAAACGGCACATAGAAATGCATCATGGTGAAAAAGAGGAATTTAGGTGTGAAATATGCCCGAAAGTTTACACTTCAAATCAAAGTTTAAGACGGCATTTAAGAACGGCTCATAATACTGACAGTAATGACGAACTAAAATGTGATTTCTGTGATAAAATCATACTGGGAAAAGAGAATCTCGAGAGCCATATGCAGTTCTATCATAAATCTGAATGTCCAGAATCAAGCCATGACAATGACTCCGATGACGACTTTGACTATGCGTGCGAAAAATGCGCACGGTGCTTCAAAAACGAACCAGATCTACGGCAGCATGTGAAAACCGAACACTCATTTAAGACTTTTTACAAATATTGCAAACAATCCCTTTTGAAACAACAGATTGATGAGAAAGATAAACCGAAGAAGGTGTTCTATAATTGTGAGTTTTGTAATAACGCTTTCTCTAGCGTTTACGAATTGAAGGATCACATGAAAATTAATCACGATAAAGAATACTGCCTGTCCTCTTGCAATGTTTGTTTCAACAAGTTTTTCAGTAAAGAAGCTATTTTCGAACACAAAAAGATATGTATACCTCCACCCAACGTGAACTCTTGCAGTCATTGTGATAAACTTTTCACAGATATCTCAAGCCTTGAGTTTCATACTAAAATATTTCATCCTCAAGCTCAAATTGCAGACTCAAATATAACTTCAACAAATATTGACGAATCTCCAGATGGTGCCTTTAAGTGCCCTGACTGTGACCGTGTCTACTACAGCGATAGGTCCCTCAAACATCACATAAAACTTAAACACAGCACCGATGAAGTTGTCGAATGCCAATATTGCGGCAAAATCTGCAACAACAAATATTACTTGGCTTCACACATCAAAATCGTACACTCAAATGATACCTGGTCAAAATGCGATTACTGTGATAAACAGTTTAAGTCTAAAAGGAATATCAGAAGGCATATAGAATATACTCATTTAGGGATGCAAAGGTATAAATGCATCGAATGTGAGACGTTGTTTAAAGAAAAGAGAAGTTTACGTAAACATGTCCGAACCAAGCATCCAGACTCAGCCGTATTTCCTCAATGCCATTTCTGTTACAAAAGATTTGAGTCCGCTAAGTCTTGCAAGATACATCTAAAGTTGCTACACTCTTTCAACATGAACACTTATCCTTGCGATCTATGCTCTGTCTCTTTCAGTTCGAAAGAAGCCTTGAATATACACCTCCAAACGAAACATTTGGCTAAAGATGAAATTTACAAATGTGAAGAATGCAACCTCGTGTTTAGAGGCCAAGAAAAGTTCGAGCGTCACAACGATTTAACTCACGTCAATATTGTCCCCAATATCAAACAAAAAGTTTTGCCTCGATGCATTATTTGCATGAAAGATTTCAGCACGCGAAAAACTCTTAAAAGGCACATCAAAAAATTCCACGACATTTTCGATGTGGATGATCTAGCTACTTTCGGAACGCGCAAACGAGTTTTCAACGTTGAATGCGAAGATTGCATTAAGAATTTCAATGATGACTATTATATTAAAGTTTTTGAAAAGCTAAAACTTTCGAGGGAATCGATTATATTTAAATGCGAAACATGTTTATCGTCATACAACAGTTTGGAATACTCAATACAGCGATACAAGATGGTGAACATAGATTCTTGCAGGAGCAAAATGATTTTGAGTGAGCTTTGTACAGCAGAAATGTCTGACGATGAGGAATCTTATTCTGGATTCGGAAATTTGCACGAACTCCATGAGATGATGGAACCAGAGAGCACCACGAATGATATTCAAGTGAAATTGGAGCCTATGGATGTTATATCCGATCAAGAGTAA
- Protein Sequence
- MFHSLNTLDFVCDYCSRTFTRKYNLQTHIENCHINSSCSCEICGQTFGSPAGLQLHYSRGHNRYNQPFPECDLCGRIFTRKQNIMSHMITVHLQGMGNEIRCKLCMKIFTTERNLKRHLKQLHNPAVEYPTCDECHKVFKGKQSLITHIQATHGPDRGSIKCHQCNKVYTNNRNLKRHIEMHHGEKEEFRCEICPKVYTSNQSLRRHLRTAHNTDSNDELKCDFCDKIILGKENLESHMQFYHKSECPESSHDNDSDDDFDYACEKCARCFKNEPDLRQHVKTEHSFKTFYKYCKQSLLKQQIDEKDKPKKVFYNCEFCNNAFSSVYELKDHMKINHDKEYCLSSCNVCFNKFFSKEAIFEHKKICIPPPNVNSCSHCDKLFTDISSLEFHTKIFHPQAQIADSNITSTNIDESPDGAFKCPDCDRVYYSDRSLKHHIKLKHSTDEVVECQYCGKICNNKYYLASHIKIVHSNDTWSKCDYCDKQFKSKRNIRRHIEYTHLGMQRYKCIECETLFKEKRSLRKHVRTKHPDSAVFPQCHFCYKRFESAKSCKIHLKLLHSFNMNTYPCDLCSVSFSSKEALNIHLQTKHLAKDEIYKCEECNLVFRGQEKFERHNDLTHVNIVPNIKQKVLPRCIICMKDFSTRKTLKRHIKKFHDIFDVDDLATFGTRKRVFNVECEDCIKNFNDDYYIKVFEKLKLSRESIIFKCETCLSSYNSLEYSIQRYKMVNIDSCRSKMILSELCTAEMSDDEESYSGFGNLHELHEMMEPESTTNDIQVKLEPMDVISDQE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00178471;
- 90% Identity
- iTF_01403650;
- 80% Identity
- iTF_01403650;