Ajap012088.1
Basic Information
- Insect
- Asobara japonica
- Gene Symbol
- lola
- Assembly
- GCA_017141405.1
- Location
- JADHZF010000100.1:135290-141910[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.6e-15 1.5e-12 47.7 0.0 2 42 374 415 373 418 0.94
Sequence Information
- Coding Sequence
- ATGTCGATGCAACAATTCTGCTTGCGGTGGAACAATCACCAGCCCAACTTCATATCGGTATTTTCAAGCTTGTTAAGCAATGAGACATTGGTTGATGTGACACTTGCTGCTGAAGGAAGACACTTACAGGCGCACAAAGTTGTACTGTCGGCCTGCAGTACGTACTTTCAATCATTGTTTACAGTGAATCCCTGTCAGCATCCGATTATTATACTCAAAGATGTCAAATTTTCGGACCTGAAAATCATGGTGGATTTTATGTACTATGGAGAAGTCAATGTATCCCAGGATCAGTTGCCATCCATTATCAAGACTGCAGAAAGTTTGAAGATCAAAGGTCTCGCTGAAATGCACACAGCTTCTTTAACAAAATGGCCAAGTGGTAATTCAGATCCGAACGATGGTAACAGAGGTGAATCATGCTCACCAAGTCCATCACCAATGTCCCCATCATACCGGAGAAAGAGATTACGAAAGTCATCAACAGGCTCCACATCTGGATCTGGTGATAAACAAGAGGAGGTTAATGAAATCACTCTTGTTGCAACTAATATTGTTAAACCAGAGCCACTAATTATGGCACAAGAAAGTGGTGAAAATTTGAGGCGTCCTATTAATACTAGCACTGAATCGCAGGGGAGTATTGATGAAGATCAGATATCAATTATGAGCAACATGGAGAGCAGTGCTGCAACAACTCCAGCACAAAGTGAGGGCTCACTTCAGGACGTGAGCCAACAATCAGGTGCCAATGTTGGGCAAAGTTCATTAGTTGCTGGACAGGCTTCAGCACATCAAGGATTGCAATGGACAATCATGGAGCACACGTATCCACGTTTCGCTCTATCCTCGTGTCAAACGAATCTGTCGATTCAAGCATCATCGGCATTTACCACCCCTGAAATAACGGCATCAACAAGCATCAATGATCAGTATCCTGGCACAAATACCCCTGGCTCGAGTTGTGCATTAACGAATTACACAAGTCCAACACATGGAGGATTACAGTCATCATCAGGTGGTCCATCACCGTCAGGTCAATGTCCCAATACTTGTCAAAGTCCGTGTGCAAGTCCCCAGGCGACAGTAAAAAGAAAGAGATCAACGAATCCCCAAGCCGATGAGAATTTCATAAGGGCATTGGATGCTGTGCGTTATGGGGGCATTGGATTTTGCAAGGCTGCCAGAATGTTTGGGGTTAATAATCGAACACTTTGGCTTGAGTACAAGAAACGTGGCTATCCCAATAATCGTCCCAGTCTTAAGTCGAGGGTGAAACAAGAAGCACCAACTTCACCACCCCCAGCACCAACATCGCAACCAGTGAATTCCCAGAGTCCAACTCCTATGGGACCACCAACTACTCCTCATAGTACTCACAATACACTAAATACACATACCATGCTCACTGCACACAGTCCACACATGCTCAATAATTATGTTGATGCCAGGCACACCGATTACTCCCTACCCAATACTAATATGCCGATTAATCTACATGGGGAAAAAGTAGGAAATAAGAGGGGTCTATTATTGCTTATGAGACACCAACCACGAGTGAAGAAGGAGCCTGAGCCAGGTCACCCATCACCGGATAGTGAGCCGGGCTCGCCCAGAATTGTCAGTTCACCCCATCCAGTGACCCCAATACTAAATCTTCCAACGCAGAATCTCCCAAAAATTGAGCCGACTCCATCAAATCAGCCTCTTTCAACTATGTCACCGTGTACAAATCTTCTAACTGTTCCTCAACCCTCCTACCTCGTTAAACAACACTCTCATCCACTTCTACCGAGTCAACAACAAGGTACTTCGAGTAATTACAGTGGCTGGATGCAGAGACAACATTCAGATCCAGAATATCCTGGAAGGACATCTAGTCCGAGTATGACGATAGATTCTGTACCGAGGATTAAAATTGAGGGAAGACTTGGAGAGAGAGATGCTCAGGATAATAGCTCAACAAGTGGGCTCAGAATTATTTCCGCTGAATTATTGAGGAGCTCTTCGACACCACAGATGGGGAGCAGTTCCAGTTCATCAGAGTCTCGACTACGGGAAGGAACGAGTGATCAACGTCTTGGGCATTGTCCAGTGCAACGTCCTGGCCCAGCTCTCGGTTGCAATCACTGCTGGAACACAGTTGATGCACATGGTCGCACTCTTCGACGTAAAACAAAATACCACTGTCCCGAATGCCAGATTAATCTATGCATTGTACCATGTTTCCAAGAATTTCACGAGCGTCCACGTGACAATTCCATCGGTAAAACCCTACCGAAAACTAGCTCAATCTAA
- Protein Sequence
- MSMQQFCLRWNNHQPNFISVFSSLLSNETLVDVTLAAEGRHLQAHKVVLSACSTYFQSLFTVNPCQHPIIILKDVKFSDLKIMVDFMYYGEVNVSQDQLPSIIKTAESLKIKGLAEMHTASLTKWPSGNSDPNDGNRGESCSPSPSPMSPSYRRKRLRKSSTGSTSGSGDKQEEVNEITLVATNIVKPEPLIMAQESGENLRRPINTSTESQGSIDEDQISIMSNMESSAATTPAQSEGSLQDVSQQSGANVGQSSLVAGQASAHQGLQWTIMEHTYPRFALSSCQTNLSIQASSAFTTPEITASTSINDQYPGTNTPGSSCALTNYTSPTHGGLQSSSGGPSPSGQCPNTCQSPCASPQATVKRKRSTNPQADENFIRALDAVRYGGIGFCKAARMFGVNNRTLWLEYKKRGYPNNRPSLKSRVKQEAPTSPPPAPTSQPVNSQSPTPMGPPTTPHSTHNTLNTHTMLTAHSPHMLNNYVDARHTDYSLPNTNMPINLHGEKVGNKRGLLLLMRHQPRVKKEPEPGHPSPDSEPGSPRIVSSPHPVTPILNLPTQNLPKIEPTPSNQPLSTMSPCTNLLTVPQPSYLVKQHSHPLLPSQQQGTSSNYSGWMQRQHSDPEYPGRTSSPSMTIDSVPRIKIEGRLGERDAQDNSSTSGLRIISAELLRSSSTPQMGSSSSSSESRLREGTSDQRLGHCPVQRPGPALGCNHCWNTVDAHGRTLRRKTKYHCPECQINLCIVPCFQEFHERPRDNSIGKTLPKTSSI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00168609; iTF_00438000; iTF_00438187; iTF_00046291; iTF_00046053; iTF_00046877; iTF_00047169;
- 90% Identity
- iTF_00438000;
- 80% Identity
- iTF_00168609;