Aalt019534.1
Basic Information
- Insect
- Aleiodes alternator
- Gene Symbol
- lola
- Assembly
- GCA_963921955.1
- Location
- OY998110.1:6520851-6526984[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4e-15 1.4e-12 47.8 0.0 2 42 375 416 374 419 0.94 2 2 7.8 7.6e+03 -2.6 0.0 30 42 419 432 418 433 0.82
Sequence Information
- Coding Sequence
- ATGTCGATGCAACAATTTTGCCTACGATGGAACAATCATCAGCCAAATTTCATATCagttttttcaacattattgAGCAATGAGACACTGGTTGATGTAACACTTGCTGCTGAAGGTAGACACTTGCAAGCACACAAAGTTGTATTATCAGCATGTAGCACATATTTTCAGTCATTGTTTACTGTTAATCCATGCCAACATCCAATTGTTATACTTAAGGATGTTAAATTTTCTGATCTCAAAATTATGGTGGATTTTATGTATTATGGAGAAGTTAATGTATCACAGGATCAATTGCCATCGATTATTAAGacTGCTGAGAGCTTGAAGATAAAAGGTCTTGCCGAAATGCATACAGCATCTTTAACAAAGTGGCCAAGTGGTAGCTCTGATCCGAGTGATGGTAATCGTGGTGAATCATGCTCACCATCACCATCGCCAATGTCACCGTCATACAGGAGAAAacgattgaggaaaaattcaactggCTCAACATCTGGATCCGGTGATAAACCAgaggaaatcaatgaaataacaCTTGTGGCAACCAATATTGTTAAACCAGAGCCATTAATTGTGGCACAAGACAGTGGTGAGAATTTGAGGCGTCCTATTAATACTAGTACTGAGTCACAGGGCAGTATTGATGAGGATCAAATATCTATTatGAGCAATATGGAAAGCAGTTCTGCTACAACACCAGCACAGAGTGAGGCCTCTATGCAGGATGTGAGTCAGCAGCCAGCAACAAATGTTGGACAGAGTACATTAGCAACGGGACAGCCTCCATCTCATCAAGGATTGCAATGGACAATCATGGAGCACACGTATCCACGTTTTGCTCTATCCTCGTGTCAAACGAATCTGTCGATTCAAGCATCATCAGCATTTACAAGCCCTGAAATAACAGCACCATCACCAATCAACGAACAGTATCCAACAAATACACAGGGTTCAAGTTGtgcattaaataattatacGAGTCCAACACACAGTGGATTACAGCAGGCAacagGTGGTGGTGGTCCATCGCCATCTGGACAGTGTCAGAACACGTGCCCAAGTCCATGTGCAAGTCCTCAGGCAGCTGTAAAAAGAAAGAGATCAACAAATCCACAggctgatgaaaattttatacgTGCACTTGATGCTGTACGTTATGGTGGAATCGGCTTCTGCAAAGCAGCAAGGATGTTCGGTGTTAACAATCGTACACTGTGGCTGGAGTACAAAAAACGTGGATATCCCAATAATCGACCGAGTTTGAAATCCCGGGTCAAACAAGAAGCACCAACATCACCACCACCATCAGCACAATCACAGGCAGTTAATTCACAGAGTCCAACTCCTATGGGACCACCAACAACACCACATACAACCCACAATACACTAAATACACATACAATGCTTACTGCACACAGTCCACATATGCTTAGTAGTTATGTTGATACTAGACACACTGATTACTCATTACCAAATCCAACTTATCAAGGAAGAGTAGGCATAAAGAGGAGTCGCCTTATGCTGATGCGTCAACCAAGAGTGAAAAAAGATCCGGAACCAGGTCATCCATCACCAGACAGTGATCCAGGATCACCGCGAATTGTTCAATCACCCCATCAAGTTACTCCAATACTGAATCTTCCAAGTGAAACTGAACCAAATCCATCAAATCAGAGTCTACTGGCAATGACGACATGCACAAATTTACTGACTGTACCACAGCCATCGTACTTAGTTAAACAGCACTCTCATCCACTTTTGCCGAGTCAACAGCAGAGTTCGTCGAGTAATTACAGTGGTTGGATGCAGAGACAGCACTCAAATCCTGAGTATCCAGGGAGAACACCGAGTCCATCGATAACGATTGATCCAATGCCGAGGATTAAAATTGAAGGGGGCCAGGATTTGAAGGAGAGTGCTGCGAGTGGATTGAGGATTATTCCTGCTGAATTATTGAGGAGTTCATCGACACCACAGATGGGCACAAGCTCAAGTTCATCAGAGACACGAACACGTGAAGGAATGAGTGATCAACGTCTTGGTCACTGTCCAGTTCAACGACCTGGCCCAGCATTGGGCTGCAATCACTGCTGGAACACTGTTGATGCACATGGTCGTACACTTAGACGTAAAACAAAATATCATTGTCCAGAGTGCCAGATTAATTTATGCATTGTACCAtgttttcaagaatttcacgAACGTGTACGTGACAATTCAACTGTTAAAACATTACCAAAAACTAGCTCAATCTAA
- Protein Sequence
- MSMQQFCLRWNNHQPNFISVFSTLLSNETLVDVTLAAEGRHLQAHKVVLSACSTYFQSLFTVNPCQHPIVILKDVKFSDLKIMVDFMYYGEVNVSQDQLPSIIKTAESLKIKGLAEMHTASLTKWPSGSSDPSDGNRGESCSPSPSPMSPSYRRKRLRKNSTGSTSGSGDKPEEINEITLVATNIVKPEPLIVAQDSGENLRRPINTSTESQGSIDEDQISIMSNMESSSATTPAQSEASMQDVSQQPATNVGQSTLATGQPPSHQGLQWTIMEHTYPRFALSSCQTNLSIQASSAFTSPEITAPSPINEQYPTNTQGSSCALNNYTSPTHSGLQQATGGGGPSPSGQCQNTCPSPCASPQAAVKRKRSTNPQADENFIRALDAVRYGGIGFCKAARMFGVNNRTLWLEYKKRGYPNNRPSLKSRVKQEAPTSPPPSAQSQAVNSQSPTPMGPPTTPHTTHNTLNTHTMLTAHSPHMLSSYVDTRHTDYSLPNPTYQGRVGIKRSRLMLMRQPRVKKDPEPGHPSPDSDPGSPRIVQSPHQVTPILNLPSETEPNPSNQSLLAMTTCTNLLTVPQPSYLVKQHSHPLLPSQQQSSSSNYSGWMQRQHSNPEYPGRTPSPSITIDPMPRIKIEGGQDLKESAASGLRIIPAELLRSSSTPQMGTSSSSSETRTREGMSDQRLGHCPVQRPGPALGCNHCWNTVDAHGRTLRRKTKYHCPECQINLCIVPCFQEFHERVRDNSTVKTLPKTSSI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00168305;
- 90% Identity
- iTF_00046291;
- 80% Identity
- iTF_00046291;