Dall008570.1
Basic Information
- Insect
- Diachasma alloeum
- Gene Symbol
- lola
- Assembly
- GCA_001412515.3
- Location
- NW:4576433-4585990[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.4e-16 5.8e-13 47.7 0.0 2 42 373 414 372 417 0.94 2 2 3.5 3.2e+03 -2.6 0.0 30 42 417 430 416 431 0.82
Sequence Information
- Coding Sequence
- ATGTCGATGCAACAATTCTGCCTTCGTTGGAACAATCATCAGCCGAATTTCATATCTGTTTTTTCAACTCTTCTGAGCAATGAGACACTAGTTGATGTGACACTTGCTGCTGAGGGGAGACACTTGCAGGCACACAAAGTCGTTTTGTCAGCTTGCAGCACGTACTTTCAGTCACTTTTCACGGTTAATCCCTGTCAGCATCCTATTGTTATACTGAAGGATGTGAAGTTCTCGGATCTCAAGATTATGGTGGATTTTATGTACTATGGGGAGGTCAATGTCTCTCAGGATCAGCTGCCATCTATTATTAAGACTGCCGAGAGTTTAAAGATCAAAGGTCTCGCCGAGATGCACACAGCGTCATTAACGAAGTGGCCAAGTGGTAGTTCAGAGCCGAGCGATGGAAACAGGGGTGAATCATGCTCACCTAGCCCATCACCAATGTCACCATCCTACAGGAGAAAGAGATTGAGGAAGACGTCGACTGGCTCGACGTCTGGATCTGGAGATAAGCAGGAGGAAGTCAGTGAAATAACTCTTGTTGCCACTAATATTGTCAAACCAGAGCCACTCATTATGACACAGGAGAGTGGTGAGAATTTAAGGCGCCCTATTAATACCAGCACTGAGTCGCAAGGGAGTATCGATGAGGATCAAATATCAATTATGAGCAACATGGAGAGTAGTTCAGCAACGACTCCGGCCCAAAGTGAGAGTTCAATGCAGGACGTGAGTCAGCAATCAGGTACAAACGTGCAGAGTTCATTATCATCAGGGCAGACATCAGCACATCAAGGATTGCAATGGACAATCATGGAGCACACGTATCCACGTTTCGCTCTATCCTCGTGTCAAACGAATCTGTCGATTCAAGCATCATCGGCATTCACAACCCCCGAAATAACGGCATCATCGAGCATCAATGATCAGTATCCTGGTACAAATACCCCAGGCTCGAGTTGTGCATTAACGAATTATACGAGTCCAACGCATGGAGGGCTTCAGCCATCGTCAGGTGGTCCATCGCCATCGGGACAGTGTACAAATACGTGTCAGAGTCCCTGCGCCAGTCCTCAGGCGACAGTCAAGAGAAAGAGATCGACAAATCCCCAGGCAGATGAGAATTTCATCAGGGCTTTGGATGCTGTTCGCTATGGGGGCATTGGTTTTTGCAAAGCTGCGAGAATGTTTGGGGTCAATAATCGAACCCTCTGGCTGGAGTACAAGAAGAGGGGCTATCCCAATAATCGGCCCAGTCTCAAGTCCAGGGTCAAGCAGGAGGCGCCCACTTCACCACCACCTGCACCAACATCACAGCCTGTTAACTCACAGAGCCCCACACCTATGGGACCTCCTACCACTCCTCATAGCACGCATAATACTCTCAATACTCACACTATGCTCACTGCACACAGCCCACACATGCTCAGCAGCTATGTGGACACCAGGCATAATGATTACTCGTTACCCAATACCAATTGTAAGTAGCAATTAGGAATAAAGAGGAGTAGATTGCTCCTGATGCGTCAGCAGCCAAGAGTGAAGAAGGACCTGGAGCCAGGACATCCCTCCCCCGACAGTGAGCCCGGCTCCCCCAGGATCGTCCAATCGCCCCATCCAGTCACGCCAATACTGAATCTTCCAACGCAGAATCTGCTGGAGACTGAGCCCAACACCTCCAACCAGAGTCTGTTGACCATGACGACGTGTACAAATCTCCTGACTGTTCCCCAGCCCTCGTACCTCGTGAAACAGCACTCTCATCCACTCCTGCCGAGCCAGCAGCAGGGGTCCTCGGGGAATTACAGTGGGTGGATGCAGAGACAGCACTCCAACCCGGAGTATCCTGGGAGGACGTCCAGTCCCAGCATGTCCATTGATCCTCTCCCGAGGATCAAGATCGAAGGGGGACCTGGGGACGGGAAGGACAATAGCTCGGCCAGTGGACTGAGGATCATTCCTGCTGAGTTGTTGAGGAGTTCCTCAACACCACAgATGGGGACGACATCCAGTTCTTCAGAGCCTCGAATCCGCGAGGGAACGAGTGACCAACGTCTCGGTCACTGCCCAGTCCAACGTCCTGGTCCAGCCCTCGGCTGCAACCACTGTTGGAACACCGTTGACGCACACGGTCGCACCCTGAGACGCAAAACAAAGTACCACTGTCCCGAGTGCCAGATAAATCTCTGCATTGTCCCCTGTTTTCAAGAATTTCACGAACGTCCACGTGACAATTCCACTGCTAAAACACTACCAAAAACTAGCTCAATCTAA
- Protein Sequence
- MSMQQFCLRWNNHQPNFISVFSTLLSNETLVDVTLAAEGRHLQAHKVVLSACSTYFQSLFTVNPCQHPIVILKDVKFSDLKIMVDFMYYGEVNVSQDQLPSIIKTAESLKIKGLAEMHTASLTKWPSGSSEPSDGNRGESCSPSPSPMSPSYRRKRLRKTSTGSTSGSGDKQEEVSEITLVATNIVKPEPLIMTQESGENLRRPINTSTESQGSIDEDQISIMSNMESSSATTPAQSESSMQDVSQQSGTNVQSSLSSGQTSAHQGLQWTIMEHTYPRFALSSCQTNLSIQASSAFTTPEITASSSINDQYPGTNTPGSSCALTNYTSPTHGGLQPSSGGPSPSGQCTNTCQSPCASPQATVKRKRSTNPQADENFIRALDAVRYGGIGFCKAARMFGVNNRTLWLEYKKRGYPNNRPSLKSRVKQEAPTSPPPAPTSQPVNSQSPTPMGPPTTPHSTHNTLNTHTMLTAHSPHMLSSYVDTRHNDYSLPNTNCK*QLGIKRSRLLLMRQQPRVKKDLEPGHPSPDSEPGSPRIVQSPHPVTPILNLPTQNLLETEPNTSNQSLLTMTTCTNLLTVPQPSYLVKQHSHPLLPSQQQGSSGNYSGWMQRQHSNPEYPGRTSSPSMSIDPLPRIKIEGGPGDGKDNSSASGLRIIPAELLRSSSTPQMGTTSSSSEPRIREGTSDQRLGHCPVQRPGPALGCNHCWNTVDAHGRTLRRKTKYHCPECQINLCIVPCFQEFHERPRDNSTAKTLPKTSSI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00168305;
- 90% Identity
- iTF_00438187; iTF_00168305; iTF_00168609;
- 80% Identity
- iTF_00438187;