Alep004657.1
Basic Information
- Insect
- Aleiodes leptofemur
- Gene Symbol
- lola
- Assembly
- GCA_963942555.1
- Location
- OZ012610.1:18178688-18184743[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5e-15 1.7e-12 47.7 0.0 2 42 394 435 393 438 0.94 2 2 8.1 9.1e+03 -2.7 0.0 30 42 438 451 437 452 0.82
Sequence Information
- Coding Sequence
- ATGTCGATGCAACAATTTTGCCTACGATGGAACAATCATCAGCCAAATTTtatatcagttttttcaacattattgAGCAATGAAACACTGGTTGATGTAACACTTGCTGCTGAAGGTAGACACTTGCAAGCACACAAAGTTGTATTATCAGCATGTAGTACATATTTTCAGTCATTGTTTACTGTTAATCCATGCCAACATCCAATTGTTATACTTAAGGATGTTAAATTTTCTGATCTCAAAATTATGGTGGATTTTATGTATTATGGAGAAGTTAATGTATCACAGGATCAATTGCCATCGATTATTAAGaCTGCTGAGAGCTTGAAGATAAAAGGACTTGCCGAAATGCATACAGCATCTTTAACAAAATGGCCAAGTGGTAGCTCTGATCCAAGTGATGGTAATCGTGGTGAATCATGTTCACCATCACCATCGCCAATGTCACCGTCATACAGGAGAAAacgattgagaaaaaattcaactggcTCAACATCTGGATCTGGTGATAAACCAgaagaaatcaatgaaataacACTTGTGGCAACTAATATTGTTAAACCAGAGCCATTAATTGTGGCACAAGACAGTGGTGAGAATTTGAGGCGTCCTATTAATACTAGTAATGAGTCACAGGGCAGTATTGATGAGGATCAAATATCTATTatgagcAATATGGAAAGTAGTTCTGCTACAACACCAGCACAGAGTGAGGCCTCAATGCAGGATGTGAGTCAGCAGTCAGCAGCAAATGTTGGACAAAGTACATTAGCAACGGGACAGCCTCCATCTCATCAAGGATTGCAATGGACAATCATGGAGCACACGTATCCACGTTTTGCTCTATCCTCGTGTCAAACGAATCTGTCGATTCAAGCATCATCAGCATTTACAAGCCCTGAAATAACAGCACCATCACCAATCAACGAACAGTATCCAACAAATACACAGGGTTCAAGTTGtgcattaaataattatacGAGTCCAACACACAGTGGATTACAGCAGACAACAGGTGGTGGTGGTAATGGTGGTAATGGTGGTGGTGGTAATGGTAATGGTGGTGGTGGCGGTGGTGGTGGTCCATCGCCATCTGGACAGTGTCAGAACACGTGCCAGAGTCCGTGTGCAAGTCCTCAGGCAGCTGTAAAGAGAAAGAGATCAACAAATCCACAGgctgatgaaaattttatacgTGCACTGGATGCTGTACGTTATGGGGGAATTGGCTTCTGCAAAGCAGCGAGGATGTTTGGCGTTAACAATCGTACACTATGGCTAGAGTACAAGAAACGTGGATATCCCAACAATCGACCAAGTTTAAAATCCCGAGTCAAACAAGAAGCACCAACATCACCACCACCATCAACACAATCACAGGCAGTTAATTCACAGAGTCCAACACCTATGGGACCACCAACAACACCACATACAACCCACAATACACTAAATACACATACAATGCTTACTGCACACAGTCCACATATGCTTAGTAGTTATGTTGATACTAGACACACTGATTACTCATTACCAAATACAAATATGCCAATTAATTTACATGCTTATCAAGGACGAGTTGGCACAAAGAGGAGTCGTCTTTTACTGATGCGTCAGCCAAGAGTGAAAAAAGATCCAGAACCAGGTCATCCATCACCAGACAGTGATCCAGGATCACCGCGAATTGTCCAATCACCTCATCAAATTACTCCAATACTGAATCTTCCAAGTGAAACTGAACCAAATCCATCAAATCAGAGTCTACTGGCAATGACGACATGCACAAATTTACTGACTGTACCACAGCCATCGTACTTAGTTAAACAGCACTCTCATCCACTTTTGCCGAGTCAACAGCAGAGTTCATCGAGTAATTACAGTGGTTGGATGCAGAGACAGCACTCAAATCCTGAATATCCAGGGAGAACACCGAGTCCATCGATAACCATTGATCCAATGCCGAGGATTAAAATTGAAGGGGGCCAGGATTTAAAGGAGAGTGCTACGAGTGGATTGAGGATTATTCCTGCTGAATTATTGAGGAGTTCGTCGACACCACAGATGGGCACGAGCTCAAGTTCATCAGAGACACGAACACGCGAAGGAATGAGTGATCAACGTCTTGGTCACTGTCCAGTTCAACGTCCTGGACCAGCATTGGGCTGCAATCACTGCTGGAACACTGTTGATGCACATGGTCGTACACTTAGACGTAAAACAAAATATCATTGTCCAGAGTGCCAGATTAATTTATGCATTGTACCatgttttcaagaatttcacgAACGTGTACGTGACAATTCAACTGTTAAAACATTACCAAAAACTAGCTCAATCTAA
- Protein Sequence
- MSMQQFCLRWNNHQPNFISVFSTLLSNETLVDVTLAAEGRHLQAHKVVLSACSTYFQSLFTVNPCQHPIVILKDVKFSDLKIMVDFMYYGEVNVSQDQLPSIIKTAESLKIKGLAEMHTASLTKWPSGSSDPSDGNRGESCSPSPSPMSPSYRRKRLRKNSTGSTSGSGDKPEEINEITLVATNIVKPEPLIVAQDSGENLRRPINTSNESQGSIDEDQISIMSNMESSSATTPAQSEASMQDVSQQSAANVGQSTLATGQPPSHQGLQWTIMEHTYPRFALSSCQTNLSIQASSAFTSPEITAPSPINEQYPTNTQGSSCALNNYTSPTHSGLQQTTGGGGNGGNGGGGNGNGGGGGGGGPSPSGQCQNTCQSPCASPQAAVKRKRSTNPQADENFIRALDAVRYGGIGFCKAARMFGVNNRTLWLEYKKRGYPNNRPSLKSRVKQEAPTSPPPSTQSQAVNSQSPTPMGPPTTPHTTHNTLNTHTMLTAHSPHMLSSYVDTRHTDYSLPNTNMPINLHAYQGRVGTKRSRLLLMRQPRVKKDPEPGHPSPDSDPGSPRIVQSPHQITPILNLPSETEPNPSNQSLLAMTTCTNLLTVPQPSYLVKQHSHPLLPSQQQSSSSNYSGWMQRQHSNPEYPGRTPSPSITIDPMPRIKIEGGQDLKESATSGLRIIPAELLRSSSTPQMGTSSSSSETRTREGMSDQRLGHCPVQRPGPALGCNHCWNTVDAHGRTLRRKTKYHCPECQINLCIVPCFQEFHERVRDNSTVKTLPKTSSI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00168305;
- 90% Identity
- iTF_00046291;
- 80% Identity
- iTF_00047169;