Agoe088889.1
Basic Information
- Insect
- Argyresthia goedartella
- Gene Symbol
- lov
- Assembly
- GCA_949825045.1
- Location
- OX463826.1:22945765-22950563[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.4e-17 6e-15 57.5 0.0 1 44 59 102 59 103 0.96
Sequence Information
- Coding Sequence
- ATGGACTCCCCCCTCGGGCTGTTCCCCCCCGGCATGGAGCACAAGATGTACCCCCTGATGGACGTCGACCACCGCCAACCGCCCCTGGATGCGCCCCTGTTCACCAATGTCAAGAAGAAATGGCGACCGAAGGGGCAGCACAGCGCGCCGCGCGGCGGCCCGCCCCGCTCCTGGACGAACGCCGAACTGACCGAGGCTCTACAGCACGTTTGGAATAAGAAAATGACCACCAGCCAAGCTTCCAGAATCTTCGGAATCCCGTACAACTCGCTGCTCATGTACGTGCGCGGCAAGTACGGGAAGAGCCTCAAACTCGAGCAGCTCCGAAAGGACTGCATCGGCGGCCCCCTAGACATGTTAAATATGAACTCcggcaacaacaacaacaatcacCCCCCAGGCAAGCACCACGACAAGGACGACCAGCACACGAACCAGAGCCAAAGACCGGCCAGCTCCGAGCCGGACATACCCTCCAACCCGATGTTCAACCCCTTCTCTCAAGGCTTCTACCCGGAGTTCCCGCCAGGGTTCCCGATGCCGCTCAACATGTTGCACCTGCTGCCGCCGAACGACAAAGGCCGGGACCTCTATCAGTCTGTCCCGCTCGCGCTAGACTCGCTGTCCGGCGGTGCGAAGGAGGAAGACTGCAAGAGCGACCGCTCCAAGGAGAATTCGGCTGACGAGGAGGGGGACGCGTACCCCCGCGTGCCGCCGCCGCACCCCCCGGACACCCGCACGCTGCTGCATCACAACGGGCAGGACTAA
- Protein Sequence
- MDSPLGLFPPGMEHKMYPLMDVDHRQPPLDAPLFTNVKKKWRPKGQHSAPRGGPPRSWTNAELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCIGGPLDMLNMNSGNNNNNHPPGKHHDKDDQHTNQSQRPASSEPDIPSNPMFNPFSQGFYPEFPPGFPMPLNMLHLLPPNDKGRDLYQSVPLALDSLSGGAKEEDCKSDRSKENSADEEGDAYPRVPPPHPPDTRTLLHHNGQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01451385;
- 90% Identity
- iTF_00161464; iTF_01561053; iTF_01545677; iTF_01546562; iTF_00034613; iTF_00682282; iTF_00932330; iTF_00035569; iTF_01342137; iTF_01503769; iTF_01547445; iTF_01451385; iTF_01452256;
- 80% Identity
- -