Tpel012278.1
Basic Information
- Insect
- Tinea pellionella
- Gene Symbol
- lov
- Assembly
- GCA_948150575.1
- Location
- OX411260.1:2076614-2079441[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.1e-18 8.4e-16 57.4 0.0 1 44 67 110 67 111 0.96
Sequence Information
- Coding Sequence
- ATGCATGAAAAAAAAATGTTCGGCCTAGATTCTCCACTGGGATTATTCCCACCTGGTATGGAACATAAGATGTACCCACTCATGGATGTTGATCACCGCCCTTCACCACTCGATGCGCCGCTCTTCACAAATGTTAAAAAGAAATGGAGGCCGAAGGGGCAACACAGCGCTCCTCGCGGGGGACCACCACGATCATGGACCAACGCAGAATTGACGGAAGCGTTACAACACGTCTGGAACAAAAAAATGACCACAAGCCAAGCCTCAAGGATTTTCGGAATACCATATAACTCTCTATTGATGTACGTGCGGGGGAAATACGGCAAAAGCCTCAAGCTGGAGCAGTTACGAAAGGATTGCATCGGCGGCCCTCTCGACGTACTCAATATGAACTCCGGCAACAATAACAACAACCACCCTCCGGGGAAGCATCACGACAAGGACGACCAACACCAAAACGCGAGCCAAAGACCGGCTTCCTCGGAGCCAGACATCACATCGAATCCCATGTTCAATCCGTTCTCGCAGGGTTTCTATCCGGAGTTTCCTCCGGGATTCCCGATGCCACTGAATATGCTACATCTATTACCTCCGAACGACAAAGGAAGGGATCTATATCAGTCGGTGCCTTTGGCGCTGGACTCGTTGTCCGGAGGAGTGAAGGACGAGGATTGTAAGAGTGACAGGTCGAAGGAGAATTCGGCTGACGAGGATGGCGATACATACCGGCCGACGTTACCGCCGCATCCGCCCGACACACGCACTCTGCTACACCACAACGGACAGGACTAG
- Protein Sequence
- MHEKKMFGLDSPLGLFPPGMEHKMYPLMDVDHRPSPLDAPLFTNVKKKWRPKGQHSAPRGGPPRSWTNAELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCIGGPLDVLNMNSGNNNNNHPPGKHHDKDDQHQNASQRPASSEPDITSNPMFNPFSQGFYPEFPPGFPMPLNMLHLLPPNDKGRDLYQSVPLALDSLSGGVKDEDCKSDRSKENSADEDGDTYRPTLPPHPPDTRTLLHHNGQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01452256; iTF_01041667; iTF_01222406; iTF_01016519; iTF_01545677; iTF_01546562; iTF_00715731; iTF_00161464; iTF_00839369; iTF_00428919; iTF_00162429; iTF_00198040; iTF_01042623; iTF_01008445; iTF_01006921;
- 90% Identity
- iTF_00162429;
- 80% Identity
- -