Apln010833.1
Basic Information
- Insect
- Arctia plantaginis
- Gene Symbol
- nfxl1
- Assembly
- None
- Location
- CADEBC010000526.1:1140478-1142949[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 2 1.8e+04 -7.8 5.6 15 19 134 138 133 138 0.81 2 19 0.014 1.3e+02 2.7 0.7 4 10 169 175 168 175 0.97 3 19 3.1e-07 0.0028 17.7 15.9 3 19 186 202 185 202 0.95 4 19 1.7 1.6e+04 -3.9 0.9 6 18 227 231 226 232 0.49 5 19 1.7e-08 0.00016 21.7 11.9 3 18 239 254 237 255 0.91 6 19 1.3 1.2e+04 -3.5 1.3 6 10 280 284 279 284 0.89 7 19 1.5e-10 1.4e-06 28.3 12.3 1 19 290 308 290 308 0.99 8 19 2e-06 0.019 15.0 19.7 3 19 345 361 337 361 0.86 9 19 2 1.8e+04 -5.3 2.2 5 10 384 389 384 389 0.88 10 19 5.9e-06 0.055 13.6 18.3 1 18 395 412 395 413 0.97 11 19 3.2e-10 2.9e-06 27.2 13.9 1 19 422 440 422 440 0.99 12 19 0.00073 6.8 6.9 7.2 10 19 489 498 487 498 0.91 13 19 0.0048 44 4.3 10.8 1 12 508 518 508 518 0.96 14 19 0.35 3.2e+03 -1.7 3.3 14 18 547 551 547 552 0.85 15 19 0.12 1.1e+03 -0.2 0.4 7 12 567 572 567 579 0.86 16 19 5.8e-05 0.54 10.4 3.8 1 11 588 598 588 599 0.97 17 19 0.00015 1.3 9.1 17.2 3 18 629 645 628 646 0.82 18 19 2 1.8e+04 -6.5 3.4 9 13 652 656 652 656 0.71 19 19 2.4e-06 0.022 14.8 12.9 1 16 687 701 687 706 0.90
Sequence Information
- Coding Sequence
- ATGGCGCGTAGATATCGAGATGCCGCTGCAAAATTACAGCAAAATGTTCAGAAACATTTGAAGGATATGAAAGAATTATCCTCTTCGGAGGACGAGGAACCATACGAAACTAGTGTTCTCGAAGGTGTATTCCAGAGTTATTCGAGAGGCGGTGGTGACACGTCCATGCTAAATAGAACAAAGAATCTTCTAGAAGAAGCCATCAGCGGCCGCTCTGTCACTTGTCTTATATGTATAGGTTCCATTAAAAGACTACACGCTATTTGGACATGTGAACACTGTTTTTCTTACTTTCATTTGTCTTGCATACAAAAATGGTCCAACGACAGTATCAGCTTACGTAGTGAAGAGAATCAAGGTCCAATTGCTGTGTGTAAGCCGAAGAAAATCGAATGGTGCTGTCCTAAATGTCGACAGTCTTACACTAAAGAAGAGATCCCAAGGAAATATCGATGTTTTTGCGGTAAAACTGATGATCCACAAAATCACCCGTGGCTCATACCGCATACATGTGGAGAGGTATGTGAAAAAAGATTATCAGTAGGAGAAAATTGTAAGCATAAATGTTTGCTTCTCTGCCACCCTGGCCCCTGCCCGCCTTGCCCTCAGACTGTGAATGGAGTGTGTTATTGTGAAAAAGAGCGCAAGAGAGTGAGATGTAGTGCAGCTCACTGGTCTTGTGGTAAACCTTGTAAGAAAACACTATTGTGTAGAActcataaatgtgaaaatgtatGCCATGAGGGCGACTGTGATCCGTGCAACTACAGTAGCACCCAGACTTGTCAGTGTAAAGCTGAGAAAACTAAGAGACCATGCAACAATCCATTCTGGCAATGCAGCAAGGTATGCAACAAATTATACACCTGTGGCTACCACAGATGTGAGAGAGTCTGCCACTCTGGTGACTGTGGCTCCTGTCCCAATTCGGGTATGTCATCTTGCCCGTGTGGTGCAAACCAACGCTTTGTGCAATGCCCTGATGTTATGGAAACTTGTCTTGGTACATGTGGAAGGAAACATAATGACTGTGAACACAACTGCCCAGAAAAATGTCACAAAGGGCCATGCCCACCGTGCCAAGTGTTGGTTCAGAAGAAGTGCCAATGTACAATGCATACCAGATCATTACCGTGCAGTAAAGAATTCAAATGTGAAACTAAATGCAAGGGAACTAGACCATGTGGCAAACACGGTTGTGCACGGAAGTGTTGTAATGGTAACTGTCCAccgtgtgaaaaaatatgtgataAACCTCTTCAATGTGGTAGACATAAATGCACAAGTATTTGTCATCGTGGACCCTGCTACCCATGTCCTAGggaatcaaaagtaacttgcagATGTAAGGAAACATACATTACAGTCCTATGTGGAAGGGAGAGACACACTAAACCCCCAAAATGTTCAATGCTATGCAAACTTAAGTATAAATGTGGTCATGTAGAGGAAAATAGACACTCTTGCCATTTTGGAGAATGTCCACCTTGCAAAGCAATATGTGACAAGCAATATCCAAAATGTGGACATCATTGTGAAGCAGTATGCCATGAATATGTGGCTGTTGTTTTTAAACAGGTTGAAAAGCCTGCTACACCCTGGGAGGTTCAACCaccaaaaactaaaataatgacTTTGGAATGTCCTCCATGCAATACACCGGTTCCAATAGTATGTTTCGGAGAACATGAGACTGATGAACAGCCTTGTCACTCTGCTACTAGAAGACCTTGCGGAAGAGAATGTGGACGTCTACTTGCTTGCAGTAACCACAAGTGCTCCTTACTATGTCATCTCTATAGTCCAGTTGCTGAGTACCCAAATGTGCCATCCAGTTGCCGACAGTGTAACCAAGAATGTTTAGTTTCACGTCCAGAAAAATGTACACACAAGTGTCCAAAGCGTGCCTGCCATCCTGGTCCTTGTCCTCCCTGTGAAGTACTAGAAAGGCTTCCTTGCCACTGTGGcataacagaaatatatttacgtTGCCGAGAAATATCTGTTGCCACTGAGGAAAATTTATCATGCAAGCAACAGTGTCCAAAGAATCTGGAATGTGGCCACCGTTGCCGCAATACATGTCATTCGGGGCCTTGTGGGAATCAGATATGTACTAAAAAGACTAAGATACACTGCACATgtggtaatattaaaaaagaagctCCATGCAATGCTGTCCGTAGtggagaaataaaaatactttgtgaTGCAACATGTGAAGCTAAGAAGATAGCAGCAAAGATAGAAAGTGAAAAAGAGAAGCAAAGACTAAAAGCGTTGGAGGAGGAAAAGAATAGAAAAGAGTTGGCTGAATATGAATGGAAATTAAGTGGtaagaagaagaaatataaagaaaagagGGTAGTTGTTAATACAGATGATAGAGGAGTGTTACAAAAATACTGGATACCAATATTGTCTGTAATTATAGCTATATTAGGGGCTTGTTATTacgtattttatgtataa
- Protein Sequence
- MARRYRDAAAKLQQNVQKHLKDMKELSSSEDEEPYETSVLEGVFQSYSRGGGDTSMLNRTKNLLEEAISGRSVTCLICIGSIKRLHAIWTCEHCFSYFHLSCIQKWSNDSISLRSEENQGPIAVCKPKKIEWCCPKCRQSYTKEEIPRKYRCFCGKTDDPQNHPWLIPHTCGEVCEKRLSVGENCKHKCLLLCHPGPCPPCPQTVNGVCYCEKERKRVRCSAAHWSCGKPCKKTLLCRTHKCENVCHEGDCDPCNYSSTQTCQCKAEKTKRPCNNPFWQCSKVCNKLYTCGYHRCERVCHSGDCGSCPNSGMSSCPCGANQRFVQCPDVMETCLGTCGRKHNDCEHNCPEKCHKGPCPPCQVLVQKKCQCTMHTRSLPCSKEFKCETKCKGTRPCGKHGCARKCCNGNCPPCEKICDKPLQCGRHKCTSICHRGPCYPCPRESKVTCRCKETYITVLCGRERHTKPPKCSMLCKLKYKCGHVEENRHSCHFGECPPCKAICDKQYPKCGHHCEAVCHEYVAVVFKQVEKPATPWEVQPPKTKIMTLECPPCNTPVPIVCFGEHETDEQPCHSATRRPCGRECGRLLACSNHKCSLLCHLYSPVAEYPNVPSSCRQCNQECLVSRPEKCTHKCPKRACHPGPCPPCEVLERLPCHCGITEIYLRCREISVATEENLSCKQQCPKNLECGHRCRNTCHSGPCGNQICTKKTKIHCTCGNIKKEAPCNAVRSGEIKILCDATCEAKKIAAKIESEKEKQRLKALEEEKNRKELAEYEWKLSGKKKKYKEKRVVVNTDDRGVLQKYWIPILSVIIAILGACYYVFYV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00932106;
- 90% Identity
- iTF_00824389; iTF_01361267; iTF_00442133; iTF_00823614; iTF_01198345; iTF_00707535; iTF_01502642;
- 80% Identity
- -