Hscr025473.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Hypercompe scribonia
Gene Symbol
nfxl1
Assembly
GCA_949316085.1
Location
OX438986.1:16433037-16435508[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 18 1 3.8e+04 -7.8 5.6 15 19 134 138 133 138 0.81
2 18 0.0072 2.7e+02 2.7 0.7 4 10 169 175 168 175 0.97
3 18 1.5e-07 0.0059 17.7 15.9 3 19 186 202 185 202 0.95
4 18 0.86 3.3e+04 -3.9 0.9 6 18 227 231 226 232 0.49
5 18 3.1e-08 0.0012 19.9 12.7 3 19 239 255 237 255 0.92
6 18 1e-10 3.8e-06 27.8 13.1 1 19 290 308 290 308 0.99
7 18 1.6e-05 0.62 11.2 22.0 3 19 345 361 337 361 0.86
8 18 1 3.8e+04 -5.3 2.2 5 10 384 389 384 389 0.88
9 18 3.7e-07 0.014 16.4 16.8 1 18 395 412 395 413 0.97
10 18 1.6e-10 6e-06 27.2 13.9 1 19 422 440 422 440 0.99
11 18 0.041 1.5e+03 0.3 5.3 10 19 489 498 486 498 0.88
12 18 0.0024 90 4.3 10.8 1 12 508 518 508 518 0.96
13 18 0.15 5.8e+03 -1.5 3.3 14 19 547 552 547 552 0.85
14 18 0.06 2.3e+03 -0.2 0.4 7 12 567 572 567 579 0.86
15 18 2.9e-05 1.1 10.4 3.8 1 11 588 598 588 599 0.97
16 18 7.3e-05 2.8 9.1 17.2 3 18 629 645 628 646 0.82
17 18 1 3.8e+04 -6.5 3.4 9 13 652 656 652 656 0.71
18 18 1.6e-06 0.06 14.4 11.9 1 16 687 701 687 706 0.89

Sequence Information

Coding Sequence
ATGGCGCGTAGATATCGAGATGCCGCTGCAAAATTACAGCAAAATGTTCAGAAACATTTAAAGGATATGAAGGAATTATCCTCTTCGGAAGACGAGGAACCATACGAAACTAGTGTTCTCGAAGGTGTATTCCAGAGTTATTGGAGAGGCGGTGGTGACACGTCTATGCTAAATAGAACTAAGAACCTTCTAGAAGAAGCCATCAGCGGTCGCTCTGTCACTTGTCTTATATGTATAGGTTCCATCAAAAGAACAAACGCTATTTGGACCTGTGAACATTGTTTTTCATACTTTCATTTGTCTTGCATACAAAAATGGGCGAATGACAGTATAAGCTTACGTAGCGAAGAGAATCAAGGTCCTATTGCTGTGTGTAAACCGAAGAAGATTGAATGGTGCTGTCCAAAGTGTCGACAATCTTACACTAAAGAAGAAATACCGAGAAAATATCGATGCTTTTGCGGTAAAACTGACGATCCGCAATGTCACCCGTGGCTAATACCGCATACATGTGGAGAGGTATGTGAAAAAAGATTATCAGTAGGAGAGAATTGTAAGCATAAGTGTTTGCTTCTCTGCCACCCTGGCCCCTGTCCACCGTGCCCTCAGACTGTGAATGGAGTATGTTATTGTGAAAAAGAGCGCAAGAGAGTGAGATGTAGTGCTGCTCACTGGTCTTGTGGTAAGCCTTGTAAGAAAACACTACTCTGTAAGACtcataaatgtgaaaatgtatGCCACGAAGGTGATTGCACTCCCTGTAGCTACACTAGCCTCCAGACTTGCCAGTGCAGAGCTGAAAAAACTAAGAGACCATGTAATGATCCATTTTGGTTATGTGACAAAGTATGCAATAAATTATATAGTTGCGGCTACCACAAATGTGAGAAAGTCTGCCACTCAGGAGATTGTGGCTCCTGCCCAAATTCGGGTATGTCGTCTTGCCCGTGTGGTGCAAACCAACGCTTTGTGCAATGCCCTGATGTTATGGAAACTTGTCTTGGTACATGTGGAAAAAAACATGATGACTGTGAACACCACTGCCCAGAAAAATGCCACAAAGGGCCATGCCCGCCATGCCAAGTCTTGATTCAGAAGAAATGCCAGTGTACAATGCATACCAGATCATTACCATGCAGTAAAGAatttaaatgtgaaacaaaATGCAGAGGAACTAGATCGTGTGGCAAACATAGTTGCGCACGAAAGTGTTGCAATGGTAGTTGTCCACCATGTGAGAAAATATGTGATAAACCACTTCAGTGTGGTAGACATAAATGCACGAGTATTTGTCATCGGGGACCCTGCTACCCATGTCCTAGGGAATCAAAAGTAACTTGCAGGTGTAAGGAGACATACATTACAGTCCTATGTGGAAGAGAGAGACACACTAAACCCCCAAAATGTTCATTACTATGCAAACTTAAGTATAAATGTGGTCACATAGAGGAAAACAGACACTCTTGCCACTTTAAAGAATGTCCACCTTGCAAAGCAATATGTGACAAGCAATACCCAAAGTGTGGACATCATTGCGAAGCAGTGTGCCATGAATATGTAGCTGTGGTTTTTAAACAGGTAGAAAAACCTGCCACACCCTGGGAGGTTCAACCAccaaaaacgaaaataatgacTTTGGAGTGTCCTCCATGTACTACACCTGTTCCAATAGTATGTTTCGGAGAACATGAGACTGATGAACAGCCTTGTCACTCTGCTACTAGAAGACCTTGTGGAAGAGAGTGTGGTCGCCTACTTACTTGCAGTAACCATAAGTGTTCCTTACTATGTCACCTCTATAGCCCAATTGCTGAGTACCCAAATGTGCCATCCAGTTGCCGACAGTGTAATCAAGAATGTTTAGTTTCACGTCCAGAAAAATGTACACACAAGTGTCCGAAGCGTGCCTGTCATCCTGGCCCTTGTCCTCCTTGTGAAGTGTTAGAAAGGCTTCCATGCCACTGTGGTGTAACAGAAATATATTTGCGTTGCCGTGAAATATCTGTTGCTACGGAAGAAACTTTATCTTGTAAGCAACAGTGTCCAAAGAATTTGGAATGTGGTCATCGTTGTCGCGTAACATGTCATTCAGGGCCTTGTGGGATTCAGATATGTACCAAAAAGACTAAGATACACTGCTCTTGTgggaatattaaaaaagaagctCTGTGCAATGCAGTCCGTAATGGAGAAATAAAAGTACTTTGTGATGCATCATGTGAAGCTAAGAAGTTAGCGGCAAAGATTGAAAGTGAGAAAGAGAAGGAGAGGCTAAAAGCTTTGGAGGAGGAGAAGAATAGAAAAGAGTTGGCTGAATATGAATGGAAATTAAGCGGTAAGAagaagaaatataaagaaaagagGGTAGTTGTTAATAAAGATGATAGGGgagtattacaaaaatactggatGCCAATATTGTCTGTAATTATAGCTATGTTAGGGATttcttattacatattttatgtatga
Protein Sequence
MARRYRDAAAKLQQNVQKHLKDMKELSSSEDEEPYETSVLEGVFQSYWRGGGDTSMLNRTKNLLEEAISGRSVTCLICIGSIKRTNAIWTCEHCFSYFHLSCIQKWANDSISLRSEENQGPIAVCKPKKIEWCCPKCRQSYTKEEIPRKYRCFCGKTDDPQCHPWLIPHTCGEVCEKRLSVGENCKHKCLLLCHPGPCPPCPQTVNGVCYCEKERKRVRCSAAHWSCGKPCKKTLLCKTHKCENVCHEGDCTPCSYTSLQTCQCRAEKTKRPCNDPFWLCDKVCNKLYSCGYHKCEKVCHSGDCGSCPNSGMSSCPCGANQRFVQCPDVMETCLGTCGKKHDDCEHHCPEKCHKGPCPPCQVLIQKKCQCTMHTRSLPCSKEFKCETKCRGTRSCGKHSCARKCCNGSCPPCEKICDKPLQCGRHKCTSICHRGPCYPCPRESKVTCRCKETYITVLCGRERHTKPPKCSLLCKLKYKCGHIEENRHSCHFKECPPCKAICDKQYPKCGHHCEAVCHEYVAVVFKQVEKPATPWEVQPPKTKIMTLECPPCTTPVPIVCFGEHETDEQPCHSATRRPCGRECGRLLTCSNHKCSLLCHLYSPIAEYPNVPSSCRQCNQECLVSRPEKCTHKCPKRACHPGPCPPCEVLERLPCHCGVTEIYLRCREISVATEETLSCKQQCPKNLECGHRCRVTCHSGPCGIQICTKKTKIHCSCGNIKKEALCNAVRNGEIKVLCDASCEAKKLAAKIESEKEKERLKALEEEKNRKELAEYEWKLSGKKKKYKEKRVVVNKDDRGVLQKYWMPILSVIIAMLGISYYIFYV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00932106;
90% Identity
iTF_00157730;
80% Identity
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