Tjac014192.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Tyria jacobaeae
Gene Symbol
nfxl1
Assembly
GCA_947561695.1
Location
OX387230.1:1307174-1309645[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 1 2.6e+04 -7.8 5.6 15 19 134 138 133 138 0.81
2 20 0.0072 1.9e+02 2.7 0.7 4 10 169 175 168 175 0.97
3 20 1.5e-07 0.004 17.7 15.9 3 19 186 202 185 202 0.95
4 20 0.86 2.2e+04 -3.9 0.9 6 18 227 231 226 232 0.49
5 20 2.9e-08 0.00076 20.0 12.5 3 19 239 255 237 255 0.92
6 20 0.65 1.7e+04 -3.5 1.0 6 10 280 284 279 284 0.88
7 20 1.3e-08 0.00034 21.1 11.3 1 19 290 308 290 308 0.99
8 20 2.1e-05 0.54 10.8 20.8 3 19 345 361 344 361 0.93
9 20 1 2.6e+04 -5.3 2.2 5 10 384 389 384 389 0.88
10 20 3e-06 0.077 13.6 18.3 1 18 395 412 395 413 0.97
11 20 1.6e-10 4.1e-06 27.2 13.9 1 19 422 440 422 440 0.99
12 20 0.00037 9.5 6.9 7.2 10 19 489 498 487 498 0.91
13 20 0.0024 61 4.3 10.8 1 12 508 518 508 518 0.96
14 20 0.12 3.2e+03 -1.2 3.4 14 19 547 552 547 552 0.87
15 20 0.06 1.6e+03 -0.2 0.4 7 12 567 572 567 579 0.86
16 20 2.9e-05 0.75 10.4 3.8 1 11 588 598 588 599 0.97
17 20 0.76 1.9e+04 -3.7 1.7 15 18 613 616 612 617 0.81
18 20 7.3e-05 1.9 9.1 17.2 3 18 629 645 628 646 0.82
19 20 1 2.6e+04 -6.5 3.4 9 13 652 656 652 656 0.71
20 20 2.6e-06 0.067 13.7 11.5 1 16 687 701 687 706 0.89

Sequence Information

Coding Sequence
ATGTCGCGTAGATACCGAGATGCCGCTGCAAAATTGCAGCAAAATGTTCAAAAACATTTGAAGGATATGAAAGATCTATCCTCTTCGGAAGACGAGGAACCTTACGAAACTAGTGTCCTCGAAGGTGTATTCCAGAGTTATTGGAGGGGTGGCGGTGACACGTCTATGCTAAATAGAACTAAGAATCTTCTAGAAGAAGCTATCAGCGGCCGCTCTGTAACTTGTCTTATATGTATAGGTTCTATCAAAAGAACAAATGCCATTTGGACTTGTGAACATTGTTATTCCTATTTACATTTGTCTTGTATACAAAAATGGTCGAACGACAGTATTAGCCTACGTAGCGAAGAGAATCAAGGTCCAATTGCTGTGTGTAAACCAAAGAAAATTGAATGGTGTTGTCCAAAATGTCGACAGTCATATACTAAAGAAGACATCCCCCGGAAATATCGATGTTTTTGCGGTAAAACTGACGATCCACAATATCATCCATGGCTCATTCCCCACACATGCGGAGAAGTATGTGAAAAAAGATTGTCAGTTGGAGATAATTGTAAGCATAAATGTTTGCTTCTCTGTCATCCTGGACCTTGCCCACCATGCCCTCAAACTGTGAATGGTGTGTGTTATTGTGAAAAAGAGCGGAAGAGAGTGAGATGCAGTGCAGCTCACTGGTCTTGTGGTAAACCTTGTAAGAAAACACTTTTATGTAAAACTCATAAATGTGAAAATGTATGCCATGAAGGCGAATGTGCTCCATGTAGCTACACTAGCATCCAGACTTGCCAGTGCAAGTCTGAGAGAGCTAAGAGACCATGTAATGATCCATTCTGGCAATGTGATAAAGTATGCAATAAATTATACTCATGTGGCTACCACAGATGTGAGAGAGTCTGTCACTCAGAGGATTGTGGTTCTTGTCCTAATTCAGGCATGTCATCTTGTCCATGTGGTGCAAATCAACGATTTGTGCAATGCCCAGATGTTATGGAAACATGTCTTGGCACTTGCAGTAAGAAACATGATGACTGTGAACACCACTGTCCAGAAAAATGTCATAGAGGACCTTGTCCACCATGCCAAGTTTTGATTCAGAAAAAATGCCAATGTACACTGCACATAAGATCCTTACCATGCAGCAAAGAGTTTAAATGTGAAACTAAATGCAGAGGAACTAGACCTTGTGGGAAACATGGTTGTGCACGGAAATGCTGTAATGGTAACTGCCCACCATGCGAGAAAATATGTGATAAACCACTTCAATGTGGCAGGCATAAGTGCACAAGTATTTGTCATCGTGGACCCTGTTACCCATGTCCTAGAGAATCGAAAGTAACTTGCAGATGTAAGGAAACTTATATCACAGTCCTATGCGGTAGGGAGAGACACACAAAACCTCCAAAATGCACTTTACTGTGTAAATTTAAGTATAAATGTGGTCATGTTGAGGAAAACAGACACTCTTGTCACTTTGGAGAATGTCCGCCATGCAAAGCAATCTGTGATAAACAATATCCAAAGTGTGGACATCATTGTGAAGCAGTCTGTCATGAATATGTTGCTGTTGTGTTTAAACAGGTTGAAAAACCTGCTACACCATGGGAGGTTCAACCACCTAAAACTAAAATAATGACTTTGGACTGTCCTCCATGCACCACACCTATTCCAATAGTTTGTTTTGGAGAACATGAGACTGATGAACAACCTTGTCACTCTGCTACTAGAAGGCCTTGTGGAAGAGAATGTGGGCGTCTTCTTGGTTGCAGCAATCATAAGTGTTCTTTATTGTGTCACCTCTACAGTCCAGTAGCTGAGTATCCAAATGTCCCTTCCAGTTGCCCACAATGTAACCACGAATGTTTAGTTACACGTCCAGAAAAATGCACACACAAGTGTCCAAAACGTGCCTGTCATCCAGGCCCTTGTCCTCCCTGTGAGGTATTAGAGAGGCTTCCCTGCCACTGTGGTTTAACAGAAATATATCTACGTTGTCGTGAAATATCTGTTGCTAAAGAGGAACATTTATCATGCAAACAACAGTGTCCAAAGAATTTAGAATGTGGTCATCGCTGCCGTAATACCTGTCATTTGGGGCCTTGTGGAATCCAGATATGTACTAAAAAAACTAAAATACATTGCCCTTGTGGAAATATCAAGAAGGAAGCTCAATGTAGTGCTGTCCGTAGTGGGGAAACAAAAATACTTTGTGATGCATCATGTGAAGCAAAAAAGATAGCAGCAGAGATAGAAAGTGAAAAAGAGAAGCAACGGCTAAAAGCTTTGGAGGAGGAAAAAAATAAGAGAGAGTTGGCTGAATATGAATGGAAATTAAGTGGAAAGAAGAAGAAATATAGAGAGAAGAGAGTAGTTGTTAATAAAGATGACAGAGGTGTCTTACAAAAATATTGGATACCAATATTGTCTATAGTTATTGCTATATTAGGGGCATCTTATTACATATTTTATGTATAA
Protein Sequence
MSRRYRDAAAKLQQNVQKHLKDMKDLSSSEDEEPYETSVLEGVFQSYWRGGGDTSMLNRTKNLLEEAISGRSVTCLICIGSIKRTNAIWTCEHCYSYLHLSCIQKWSNDSISLRSEENQGPIAVCKPKKIEWCCPKCRQSYTKEDIPRKYRCFCGKTDDPQYHPWLIPHTCGEVCEKRLSVGDNCKHKCLLLCHPGPCPPCPQTVNGVCYCEKERKRVRCSAAHWSCGKPCKKTLLCKTHKCENVCHEGECAPCSYTSIQTCQCKSERAKRPCNDPFWQCDKVCNKLYSCGYHRCERVCHSEDCGSCPNSGMSSCPCGANQRFVQCPDVMETCLGTCSKKHDDCEHHCPEKCHRGPCPPCQVLIQKKCQCTLHIRSLPCSKEFKCETKCRGTRPCGKHGCARKCCNGNCPPCEKICDKPLQCGRHKCTSICHRGPCYPCPRESKVTCRCKETYITVLCGRERHTKPPKCTLLCKFKYKCGHVEENRHSCHFGECPPCKAICDKQYPKCGHHCEAVCHEYVAVVFKQVEKPATPWEVQPPKTKIMTLDCPPCTTPIPIVCFGEHETDEQPCHSATRRPCGRECGRLLGCSNHKCSLLCHLYSPVAEYPNVPSSCPQCNHECLVTRPEKCTHKCPKRACHPGPCPPCEVLERLPCHCGLTEIYLRCREISVAKEEHLSCKQQCPKNLECGHRCRNTCHLGPCGIQICTKKTKIHCPCGNIKKEAQCSAVRSGETKILCDASCEAKKIAAEIESEKEKQRLKALEEEKNKRELAEYEWKLSGKKKKYREKRVVVNKDDRGVLQKYWIPILSIVIAILGASYYIFYV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00932106;
90% Identity
iTF_00157730;
80% Identity
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