Slub027736.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Spilosoma lubricipeda
Gene Symbol
nfxl1
Assembly
GCA_905220595.1
Location
HG992297.1:12428879-12431347[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 18 1 3.6e+04 -7.8 5.6 15 19 134 138 133 138 0.81
2 18 0.0072 2.6e+02 2.7 0.7 4 10 169 175 168 175 0.97
3 18 1.5e-07 0.0056 17.7 15.9 3 19 186 202 185 202 0.95
4 18 1.2e-08 0.00044 21.2 12.0 3 19 239 255 237 255 0.92
5 18 0.65 2.4e+04 -3.5 1.0 6 10 280 284 279 284 0.88
6 18 1e-10 3.7e-06 27.8 13.1 1 19 290 308 290 308 0.99
7 18 0.00018 6.7 7.8 20.3 3 19 345 361 337 361 0.86
8 18 1 3.6e+04 -5.3 2.2 5 10 384 389 384 389 0.88
9 18 3e-06 0.11 13.6 18.3 1 18 395 412 395 413 0.97
10 18 1.6e-10 5.7e-06 27.2 13.9 1 19 422 440 422 440 0.99
11 18 0.00037 13 6.9 7.2 10 19 489 498 487 498 0.91
12 18 0.0024 86 4.3 10.8 1 12 508 518 508 518 0.96
13 18 0.15 5.4e+03 -1.5 2.8 14 18 547 551 547 552 0.87
14 18 0.06 2.2e+03 -0.2 0.4 7 12 567 572 567 579 0.86
15 18 2.9e-05 1 10.4 3.8 1 11 588 598 588 599 0.97
16 18 0.00026 9.4 7.3 15.3 3 18 629 645 628 646 0.82
17 18 1 3.6e+04 -6.5 3.4 9 13 652 656 652 656 0.71
18 18 7e-06 0.25 12.4 11.9 1 16 687 701 687 706 0.87

Sequence Information

Coding Sequence
ATGGCGCGAAGATACCGAGATGCCGCTGCAAAATTACAGCAAAATGTTCAGAAACATTTGAAGGAtatgaaagaattatcctcttcGGAGGACGAGGAACCTTACGAAACGAGTGTTCTCGAAGGGGTATTTCAGAGTTATTGGAGAGGCGGTGGTGATACGTCTATGCTAAATAGAACTAAGAATCTTCTAGAAGAAGCCATCAGTGGCCGCTCTGTTACATGTCTTATATGTATAGGTTCCATTAAAAGAACAAACCCTATTTGGACCTGTGAACATTGTTTTTCGTACTTTCATTTGTCTTGCATACAAAAATGGGCGAACGATAGTATCAGCTTGCGTAGCGAAGAGAATCAAGGTCCAATTGCTGTGTGTAAACCGAAGAAAATTGAATGGTGCTGTCCAAAATGTCGACAGTCTTATAATAAAGAAGAGATCCCGCGAAAATATCGATGTTATTGCGGTAAAACTGATGATCCGCAATATCACCCGTGGCTCATACCGCACACATGTGGAGAGGTGTGTGAAAAAAGACTATCAGTAGGAGAAAACTGTAAGCATAAATGTTTGCTTCTCTGCCACCCTGGCCCCTGCCCGCCGTGCCCGCAGACTGTGAATGGAGTGTGTTATTGTGAAAAAGAACGTAAGAGAGTGAGATGTAGTGCAGCTCACTGGTCTTGTGGCAAATCTTGTAAGAAAATACTACTGTGTAAAACTCATAAATGTGAAAATGTATGCCATGAAGGTGATTGCGCTCCATGTAGCTACACCAGTGTGCAGACTTGCCAGTGCAAGGCTGAGAAAACTAAGAGACCATGTAATGATCCATTTTGGCAATGTGACAAGGTatgcaataaattatataattgcGGCTACCACAAATGTGAGAAAGTATGCCACTCAGGTGATTGTGGCTCCTGTCCTAATTCAGGTATGTCATCTTGCCCCTGTGGTGCAAACCAACGCTTTGTGCAATGCCCTGATGTCATGGAAACTTGTCTGGGTACATGTGGAAAGAAACATGATGACTGTGAACATCATTGCCCAGAAAGATGTCACAAAGGGCTATGCCCACCGTGCCAAGTCTTAATTCAGAAAAAATGCCTGTGCACAATGCATACTAGATCCTTACCGTGCAGTAAAGAATTTAAATGTGAAACTAAATGCAGAGGAACTAGGTTGTGTGGCAAACATGGTTGTGCACGGAAATGTTGTAACGGTAACTGTCCACCATGTgagaaaatatgtgataaaccaCTTCAGTGTGGTAGACATAAATGCACGAGTATTTGTCATCGAGGACCCTGTTATCCATGTCCTCTGGAATCAAAAGTAACTTGCAGATGTAAAGAGACATATGTTACAGTCCTGTGTGGAAGAGAAAGACACACTAAACCCCCAAAATGTTCTTTGCTATGTAAACTCAAGTATAAATGTGGTCATGTAGAGGAAAACAGACACTCCTGCCACTTTGGAGAATGTCCACCTTGCAAAGCGATATGTGATAAGCAATATCCAAAGTGTGGACATCATTGCGAAGCAGTGTGCCATGAATATGTAGCTGTTGTTTTCAAACAGGTTGAAAAGCCTGCTACACCATGGGAGGTGCAACCACCAAAAACGAAAATAATGACTTTAGAGTGTCCTCCATGCATGACGCCTGTTCCTATAGTATGTTTCGGAGAACATGAGACTGACGAACAGCCTTGTCACTCTGCTACTAGAAGACCTTGTGGAAGAGAGTGTGGACGTCTACTTGCTTGCAGTAACCACAAGTGTTCCTTGCTTTGTCACCTCTATAGTCCGGTCGCTGAGTACCCAAATGTGCCGTCCAGTTGCCGACAGTGTAACCAAGAATGTTTAGTTTCACGTCCAGCAAAATGTACACACAAGTGTCCAAAGCGTGCCTGCCATCCTGGCCTTTGCCCTCCCTGTGAAGTATTAGAAAGGCTTCCTTGCCACTGTGGCATAACGGAAATATATTTACGTTGCCGTGAAATATCTGTTGCTACTGAGGAACATTTATCATGTAAGCAACAGTGTCCAAAGAATTTAGAATGTAGTCACCGCTGTCGCAATACCTGTCATTCAGGCCCTTGTGGCACCCAGATATGTACTAAAAAGACTAAGATACACTGCCCTTGTgggaatataaaaaaagaagctCCCTGCAATGCTGTCCGTAATGGAGAAGTAAAAATACTTTGTGATGCAACATGTGAAGCTAAGAAGACTGCAGCAAAGATTGAAAGTGAGAAAGAGAAGCAGAGACTTAAAGCATTGGAAGAAGAAAAGAATAGAAAAGAGTTGGCTGAATATGAATGGAAATTGAGTGGtaagaagaagaaatataaagaaaagaggGTAGTTGTTAATAAAGATGATAGgggaatattacaaaaatattggaTACCAATATTATCTGTGAGTATAGCTATATTAGGGattacttatatgttttatttataa
Protein Sequence
MARRYRDAAAKLQQNVQKHLKDMKELSSSEDEEPYETSVLEGVFQSYWRGGGDTSMLNRTKNLLEEAISGRSVTCLICIGSIKRTNPIWTCEHCFSYFHLSCIQKWANDSISLRSEENQGPIAVCKPKKIEWCCPKCRQSYNKEEIPRKYRCYCGKTDDPQYHPWLIPHTCGEVCEKRLSVGENCKHKCLLLCHPGPCPPCPQTVNGVCYCEKERKRVRCSAAHWSCGKSCKKILLCKTHKCENVCHEGDCAPCSYTSVQTCQCKAEKTKRPCNDPFWQCDKVCNKLYNCGYHKCEKVCHSGDCGSCPNSGMSSCPCGANQRFVQCPDVMETCLGTCGKKHDDCEHHCPERCHKGLCPPCQVLIQKKCLCTMHTRSLPCSKEFKCETKCRGTRLCGKHGCARKCCNGNCPPCEKICDKPLQCGRHKCTSICHRGPCYPCPLESKVTCRCKETYVTVLCGRERHTKPPKCSLLCKLKYKCGHVEENRHSCHFGECPPCKAICDKQYPKCGHHCEAVCHEYVAVVFKQVEKPATPWEVQPPKTKIMTLECPPCMTPVPIVCFGEHETDEQPCHSATRRPCGRECGRLLACSNHKCSLLCHLYSPVAEYPNVPSSCRQCNQECLVSRPAKCTHKCPKRACHPGLCPPCEVLERLPCHCGITEIYLRCREISVATEEHLSCKQQCPKNLECSHRCRNTCHSGPCGTQICTKKTKIHCPCGNIKKEAPCNAVRNGEVKILCDATCEAKKTAAKIESEKEKQRLKALEEEKNRKELAEYEWKLSGKKKKYKEKRVVVNKDDRGILQKYWIPILSVSIAILGITYMFYL*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00932106;
90% Identity
iTF_00157730;
80% Identity
-