Basic Information

Insect: Archips xylosteana
Gene Symbol: znf711
Assembly: GCA_947563465.1
Location: OX387363.1:11773562-11782251[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0087 0.63 11.4 2.2 2 23 72 93 71 93 0.96

2 12 0.04 2.9 9.3 0.2 2 23 100 122 99 122 0.95

3 12 0.15 11 7.5 0.2 2 23 130 152 129 152 0.93

4 12 0.00018 0.013 16.7 5.4 1 23 158 180 158 180 0.97

5 12 4.9e-06 0.00036 21.6 2.9 1 23 186 208 186 208 0.98

6 12 0.062 4.5 8.7 1.4 1 20 214 233 214 235 0.92

7 12 0.56 41 5.7 1.8 3 19 254 270 253 275 0.92

8 12 7.7e-05 0.0056 17.8 2.6 1 23 559 581 559 581 0.97

9 12 2.3e-05 0.0017 19.5 5.6 1 23 588 610 588 610 0.98

10 12 0.024 1.8 10.0 0.0 1 23 618 643 618 643 0.93

11 12 2.4e-05 0.0018 19.4 2.6 1 23 649 673 649 673 0.97

12 12 1.3e-05 0.00093 20.3 1.2 1 22 679 700 679 700 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0087	0.63	11.4	2.2	2	23	72	93	71	93	0.96
2	12	0.04	2.9	9.3	0.2	2	23	100	122	99	122	0.95
3	12	0.15	11	7.5	0.2	2	23	130	152	129	152	0.93
4	12	0.00018	0.013	16.7	5.4	1	23	158	180	158	180	0.97
5	12	4.9e-06	0.00036	21.6	2.9	1	23	186	208	186	208	0.98
6	12	0.062	4.5	8.7	1.4	1	20	214	233	214	235	0.92
7	12	0.56	41	5.7	1.8	3	19	254	270	253	275	0.92
8	12	7.7e-05	0.0056	17.8	2.6	1	23	559	581	559	581	0.97
9	12	2.3e-05	0.0017	19.5	5.6	1	23	588	610	588	610	0.98
10	12	0.024	1.8	10.0	0.0	1	23	618	643	618	643	0.93
11	12	2.4e-05	0.0018	19.4	2.6	1	23	649	673	649	673	0.97
12	12	1.3e-05	0.00093	20.3	1.2	1	22	679	700	679	700	0.96

Sequence Information

Coding Sequence: ATGGATTCCAATCTATCATTCTTCAGTCTACCATTCGTGGACTCGGAGACTACAGACTTGGTGCTGAATATCAAGAATGATCGCTGTGGGTACGACTTGCACACGAGTTTGCCGTCTCACGGCAACTTGTTGGGATCAGACGATGTGTTGGCCCAATTTTTGTCTCCAGACGAGCCCCTCGAAGAGCCTGACTTGAATGGACCCACCACCTTGCACTGCGAGATATGCAGGAAGAAGTTTGATAATGCTAAGAAGTACTATGGACATTTGAGGATACATTCCAAGGGCAATGCTTGGGTTTGTGATAAGTGTCCTGAGCAAAAGTTTGCTACCAAGCAAGCTTTGATGAAGCATGGGCTGACGCACGCGCCTCTGGAACGCGTATGGCGCTGCCCACAGTGCAGCCTTTCCTTTGAGGCACTCTGGAGATTGCAGCAACATCTCTTTTCTACACATTTAGAGTACAGGCCTCATAAATGCGATGAATGTGAAAAGGCTTTCCATAAGAAATCTGATTTAAAAAGGCACAAAGACATGCACAGCAATGTAAAGAAATTTTCATGTTCAGTATGTGGGGTACAGTTTAAAGACAATTGCAATCTGAAGCGGCACATGCTTCGGCATACAAATGAGAAGCCTTATTGCTGCGCAGGTTGCGGCAACAGGTATAAACAGCTGGCATCTATGAAGCGACACAGTCAGAAGTGCCCCAAGAATCAGTTCAACCACAATCTGGACCCGACGACGCGAAAAAACCACTGCAGAGTCTGCGGCATGATTTTCCAGTACAAAAGTGCCTTGCTGGAACACTGCGTTAGACAACACACAAACCCACCTAATAACACCACCACTAATATCGAGAAAGTTGATAAACCACATCAAGCAACTATCAACATAGACCACAACAGAACTGTGGACAATATTGTCGATGATATCCTTTCCGCTGAAGACGATTATATGACAATGTCCACCCAAAATGAAATACTGAACGTATACAACAACCACACTGAAACAGATACCAATAATGATAACCTAATGCACTTCGAATTCCTTAAAGCGATGAATCAACTGCACAGCTTAGATGATGAATTATTTTACAATGATCTTGACTTGGATAATTTCCAAGCAAACCACATATTTAACATGAACACTAATGACATGGATTATGGAGACAAAAGTGCTGAGATACTTTTCGATTTTGCTGATAATGGCAGAAGTATGGATCAAGACATTATGAATGTACTTTCAGAAGTCGGTCCATCGTTTACTGAGACTAATAAACCTGAACCAGCAAAGAATCCTACAGTTTCCGTAAATGAGTGTGCTACTATTTTCGAAAGCGATGTGGACTTGGAAGCTAGTACTAATTTAGCTGCTAATTTAAACCAACTAATAGGAGAAAACAATGTTCAGTATATTTCAACTGAAGACGATGACACGTTTATTATAAGTTTGAACAGTGCTATAGACGCGGAGCAGTTAACAGACATGCTGAACATAGGAGTTGAATTAGTTGAAAATAACAATGAAGAAGAAAAAATACCCGAGGTTCATAGTACTGAAGTGGATAGTGAACCAATAGTGATTAAGATTCAAGAGCCTATAGTAGATAAAGACGCTGCTAGTGCTAAAGAAAACGCTGCAGTGAAACCTAAAATAAAGAAATGCACTTTGTTCGTATGCCGCACTTGTAATAAAGTTTTCAAAAAGAAGGATAATTACAAATCGCATAAAGCGATCCACAACCCGTCTTTACGCGCTCATCGGTGTCGTATGTGTGGTGAACGCTTCAGCTACCGTTCAACACTCAACAAGCATCGTAAGACGCATGAATCGGTACCCACCAAGCGCTTCCCTTGCGCACTTGAGGGTTGCGAACGAGTTTATAGCGCTGCTTGGATGTTGAAAAATCACATGGAGCGCGACCACGAGAAACTGATGCCGTATAAATGTGACAAAAAAGACTGCGGGAAAAGATTCTACAAGCAGTCCGACTTGGTCAAACACGAAAGGTTCCACTCTGGCGCACGGCCCTATTCGTGTGACATCTGTCATCGCGCGTTCCCGCAAATTTCACACCTCAAACGACACGAACGGACAGTCGACTGTACCAAACAGTGA
Protein Sequence: MDSNLSFFSLPFVDSETTDLVLNIKNDRCGYDLHTSLPSHGNLLGSDDVLAQFLSPDEPLEEPDLNGPTTLHCEICRKKFDNAKKYYGHLRIHSKGNAWVCDKCPEQKFATKQALMKHGLTHAPLERVWRCPQCSLSFEALWRLQQHLFSTHLEYRPHKCDECEKAFHKKSDLKRHKDMHSNVKKFSCSVCGVQFKDNCNLKRHMLRHTNEKPYCCAGCGNRYKQLASMKRHSQKCPKNQFNHNLDPTTRKNHCRVCGMIFQYKSALLEHCVRQHTNPPNNTTTNIEKVDKPHQATINIDHNRTVDNIVDDILSAEDDYMTMSTQNEILNVYNNHTETDTNNDNLMHFEFLKAMNQLHSLDDELFYNDLDLDNFQANHIFNMNTNDMDYGDKSAEILFDFADNGRSMDQDIMNVLSEVGPSFTETNKPEPAKNPTVSVNECATIFESDVDLEASTNLAANLNQLIGENNVQYISTEDDDTFIISLNSAIDAEQLTDMLNIGVELVENNNEEEKIPEVHSTEVDSEPIVIKIQEPIVDKDAASAKENAAVKPKIKKCTLFVCRTCNKVFKKKDNYKSHKAIHNPSLRAHRCRMCGERFSYRSTLNKHRKTHESVPTKRFPCALEGCERVYSAAWMLKNHMERDHEKLMPYKCDKKDCGKRFYKQSDLVKHERFHSGARPYSCDICHRAFPQISHLKRHERTVDCTKQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00325709; iTF_00155579; iTF_00149794; iTF_00148724; iTF_00342467; iTF_00462691; iTF_01136070; iTF_01135081; iTF_00021575; iTF_00023055; iTF_01463548;
90% Identity: iTF_00021575;
80% Identity: -