Basic Information

Gene Symbol
znf711
Assembly
GCA_005406045.1
Location
BHDV01071479.1:26-6487[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 12 0.0074 0.42 11.4 2.2 2 23 74 95 73 95 0.96
2 12 0.034 1.9 9.3 0.2 2 23 102 124 101 124 0.95
3 12 0.3 17 6.3 0.1 2 23 132 154 131 154 0.93
4 12 3.6e-05 0.0021 18.6 6.1 1 23 160 182 160 182 0.98
5 12 2.2e-06 0.00012 22.5 2.4 1 23 188 210 188 210 0.98
6 12 0.037 2.1 9.2 1.5 1 20 216 235 216 237 0.92
7 12 0.18 10 7.0 1.8 3 19 256 272 255 277 0.92
8 12 6.5e-05 0.0037 17.8 2.6 1 23 562 584 562 584 0.97
9 12 6.3e-05 0.0036 17.9 4.4 1 23 591 613 591 613 0.98
10 12 0.0009 0.051 14.2 0.3 1 23 621 646 621 646 0.96
11 12 2.1e-05 0.0012 19.4 2.2 1 23 652 676 652 676 0.97
12 12 1.1e-05 0.00062 20.3 1.2 1 22 682 703 682 703 0.96

Sequence Information

Coding Sequence
atGGATTCCAGTCTGTCATTCTTCAGTCTACCATTTGTGGACTCTGAGGCTACTGATTTGGTGCTCAATATCAAGAACGACCGTGGCTGCGGATACGATGAGCTGCACACGAGTTTGCCTTCTCATGGGAACCTGTTGGGATCCGACGATGTTTTGGCCCAGTTTTTGTCCCCAGACGAGCCCTTAGAAGAGCCTGATTTGAACGGACCAACTACTTTGCACTGCGAGATATGTAGAAAGAAGTTTGATAATGCTAAGAAGTATTATGGACACTTGAGAATACATTCCAAGGGCAATGCCTGGGTTTgtgACAAGTGTCCGGAGCAGAAGTTTGCCACCAAGCAGGCCTTGATGAAGCATGGGTTGACGCACGCTCCTCTGGAACGGGTGTGGCGGTGCCCGCAGTGCAGCCTCGCCTTTGAGGCGCTCTGGAGGCTTCAGCAGCACCTCTTCTCTACTCATCTGGAGTACAGgCCTCACAAATGTGATGAATGTGAGAAGTCTTTCCATAAGAAATCAGACTTAAAAAAACATCAGGACATGCACAGCAATGTAAAGAAGTTCCCATGTTCTGTGTGTGGGGTACAGTTTAAAGACAAATGTAATCTCAAGAGGCACATGCTGCGGCACACTAATGAGAAGCCATATTGTTGTGGGGGATGTGGCAATAGGTATAAACAGTTAGCGTCCATGAAGAGGCACAGTCAGAAGTGCCCAAAGAACCAGTTCAGCAACAACCTGGACCCCAAGACGCGCAAGAACCACTGCCGGGTCTGCGGTATGGTCTTCCAGTACAAGAGTGCTCTGCTGGAACATTGTGTCAGgcaACACACTAACTCACCTAGCAATATTACCAACAATAATGTAGAAAAAGAAGACAAACCGCTACAAACCACAATTAATATAGACCACAGCAGAACAGTAGATAACATTGTTGATGACATCCTTTCTGCAGAAGACGACTACATGACAATGTCTACACAAAACGAAATATTAAATGTGTACAACAATCAGACTGAAACAGACAATAACAATGATAATCTAATGCACGTGGAGTTCCTTAAAGCAATGAACCAATTGCACAGTTTAGATGATGAATTATTTTACAATGATCTAGACTTAGATAATTTCCAAGCAAACCACATATTTAACATGAACACCAACGACATGGATTATGGCGACAAAAACGCTGAAATACTATTCGATTTCGCTGATAGTGGCCGAAGCATGGATCAAGATATTATGAACGTTCTATCAGAAGTTGGTCCATCATTCACAGAGCCGATTAAGCCTGAACCTGTAAACAATCCTCCAGTTTCCGTGAACGAATGCGCAACTATTTTCGAAAGTGATGTAGACTTGGAAGCCAGTACGAATTTAGCTGCTAATCTAAATCAGTTGATAGGAGAAAACAATGTTCAGTACATTTCAACTGAGGATGACGACACGTTTATTATAAGTTTGAACAGCGCCATAGACGCAGAGCAGTTGACAGACATGTTGAATATAGGAGTTGAATTagttgaaaataataatgaagaaGAAAAAGTACCTGAGGTTGCTAACGCAGAGGTGGACAGCGAACCGATAGTAATTAAGATTCAAGAGCCTGCTGTGGATAAAGATGTTACGAGTGATAAGGAAAACGCTACAGTAAAACcgaaaataaagaaatgtacTCTATTTGTTTGCCGCACATGTAACAAAGTTTTTAAGAAGAAGGATAATTATAAATCTCATAAAGCAATCCACAACCCGTCACTTCGCTCGCACCGCTGCCGAACGTGCGGCGAGCGCTTCAGCTACCGCTCAACGCTCAACAAGCACAGCCGGGTGCACGACTCGAAGCCCGCTAAGCGATTCCCCTGCACGCACTTGGGCTGTGACAAAGTTTACAGCGCCGCTTGGATGTTGAAAAATCACATGGAGCGCGACCATGAGAAACTGATGCCGTTCAAATGCGACAGGAATGATTGCGGGAAGAGATTCTACAAACAGTCAGATCTAGTCAAGCATGAGAGGTTCCATTCCGGGTCGAGACCGTACTCGTGCGACATCTGCCACCGCGCTTTCCCTCAGATCTCACACCTCAAGCGGCACGAACGGACCGTCGACTGCACTAAACAtgTACAGAGTTCACAGTGA
Protein Sequence
MDSSLSFFSLPFVDSEATDLVLNIKNDRGCGYDELHTSLPSHGNLLGSDDVLAQFLSPDEPLEEPDLNGPTTLHCEICRKKFDNAKKYYGHLRIHSKGNAWVCDKCPEQKFATKQALMKHGLTHAPLERVWRCPQCSLAFEALWRLQQHLFSTHLEYRPHKCDECEKSFHKKSDLKKHQDMHSNVKKFPCSVCGVQFKDKCNLKRHMLRHTNEKPYCCGGCGNRYKQLASMKRHSQKCPKNQFSNNLDPKTRKNHCRVCGMVFQYKSALLEHCVRQHTNSPSNITNNNVEKEDKPLQTTINIDHSRTVDNIVDDILSAEDDYMTMSTQNEILNVYNNQTETDNNNDNLMHVEFLKAMNQLHSLDDELFYNDLDLDNFQANHIFNMNTNDMDYGDKNAEILFDFADSGRSMDQDIMNVLSEVGPSFTEPIKPEPVNNPPVSVNECATIFESDVDLEASTNLAANLNQLIGENNVQYISTEDDDTFIISLNSAIDAEQLTDMLNIGVELVENNNEEEKVPEVANAEVDSEPIVIKIQEPAVDKDVTSDKENATVKPKIKKCTLFVCRTCNKVFKKKDNYKSHKAIHNPSLRSHRCRTCGERFSYRSTLNKHSRVHDSKPAKRFPCTHLGCDKVYSAAWMLKNHMERDHEKLMPFKCDRNDCGKRFYKQSDLVKHERFHSGSRPYSCDICHRAFPQISHLKRHERTVDCTKHVQSSQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00156531;
80% Identity
-