Anig026015.1
Basic Information
- Insect
- Aporophyla nigra
- Gene Symbol
- -
- Assembly
- GCA_947507805.1
- Location
- OX382291.1:34847840-34853734[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.5e-12 6.6e-10 39.2 0.0 4 39 16 51 13 57 0.86
Sequence Information
- Coding Sequence
- ATGGATCACAAAAAGAAGTACAATAGGTTTCAATACAGTCAACAAGCACTAGAAGCAGCTCTTAAGTCAATTGCTAATGGAGAACTAAGTATCAATAAAGCAAGCAATGTGTACAAGATACCAAAATCGACTTTACATAATAAAATCACAAACAAGGTACCTTTGCAAAGAAAAATGGGCCCTCAGTCCGAGCTTACTATAGATGAAGAAGCTAAGATTTCCGACTGGATTATAAATAAAGCTAAATTAGGTTTTCCAATGCACCCAGAAGAAGTTTTCGATACTGTTGAAAATTTTATGACCACTAATAATAGGAAAAATAAGTTTATCGGGAATAGACCAGGAAAAAAGTGGCTTAGTTTATTCTTAAAAAGGCATCCTGAGATTACAAAAAGGAATGCGGAGATTATATCCAAAGGCAGAGCCGCAGTTACTGAACAAGCTATCAGAGCTTGGTTCAAGGAACTCGAAGAGTTTTTAACAGAAGAACAAGCATTGGATATAAAAGACGACCCCAGTCGCATATTTAATGCCGACGAAACAGGTGTAATGACCTGCCCGAAAACCGGAATAATATTGGGGCCCAAAAATTACAGAAACACTTACGAGATTTCGGGTGGGAAAGAAAAAGAATCACTTACAGTTCTATGTAATTTTGCAGCAGATGGGAGGGATGTTCCTCCATTTGTCATATACCCTTACAAACGAATGCCTCCGGCTGTGATACAAAATTTTCCAGATACCTGGTTTATGGGGCGATCAGACAGTGGATGGATGGTGTCCAACACTTTTTTTTCATACATACAAATGTTTTACGATTGGCTGGTTCAGAAAAAAATACAATTACCGGTTTTACTTTTTCTTGATGGCCACAAATCTCATATAAACCAGGAAATGTTTACGTTTTGTCAGGAAAAGCGAATATTAATATTCTGCTTATATCCGAATGCCACGCACATATTACAGCCCTGTGATGTCGGCATTTTTGGCCCCATAAAAAAGAGTTGGCGGAAAATCGTGCGCAAAAATAAACAAAATTCTACAGCATCCATAACAAAACATAATTTCGCAATAAAATTTAAAGAAGCCTACACCAGTGGATTAAAAGTTGAAACCATAAAACATGCTTTTAGGGCATGTGGACTATATCCTTTAAATGCAGACGGAGTTGACTATTCAAAATGCATTAGCACTCGAAGAGAGGAAATTAATGGGCAAATTGCTCTTAATCATGATAACCGAATTCTAGACGAGAGAAAGGACGATATGAGGAGCACTATTAAAATAATTGAAACAGAAGTAGGTCAAAGTATCAGAAACGAATTCGTTCAGGCTTACTTGACCAAGAATAAGCATCAGCATGCATATTTTTCACTCTGGTTCAAATGTCGCAAAGAACTCGATGGTGTTAGAGATGTGTCTAGAGGAGCATCAATGGAGGCACCAGATGCTAACAATTCCTCCCAAAATGCTCCTCTCGATTTATCCAATACGTCGACTTCTATACTTCAATCATTATCTAACACACAATTATTGCATGGAGACATACAACCCGTCATTAATTCCGAAGCAGACCCGTGCTCCATCACATTTCATGACCAAGATTTGACAAATTTTATCGTTCGTTCGTTCGTTCGTTTTAATAATATTTCTAATTGTTCAGAATATCTTAAAGACTATACGGAAAATCTAAACGAAACCACCGAAATAGTAGAGTTTATAATTAATAGTGAATTGAATCCACCAACCGTAATTCCTCTTCCATGGTATGATACTCCACAAGCTGGTACATCGTTAGACATTAGAACAGAATTGTTTCTAAGCGATGGACCTTCTACATCTTCTACTCCTATATTATTTATTGAAAGTAATCCAGAAATTGAAAACAATAGTTCTATGAATGTGTGTACAATCACGGAGGACGATATTCAGCCAGTTGTTAACTCAAATAAAATCGACAGCTTTCTGGGGTATCCAAAAATCGCTTCGGAAAAAAAAGCAGCCAAAGTAAAAAAACCTAATCCCATGCCGTTTGGATTAACAGGCCAACGATACAAAGCGTATGTAGAAAAGATACAAGAAGAAAAGAGATCAAAAGAAGAAGACAAAATCAATGAAAAAAAAAGGAAATTAGAGGCAAAAGAAAATGAAAAACGAAGAAAACTGGAAGAAAAAGAAAACAAAAAGAAGGATAGAGAAGAAAAGCTTTCACAAAAACGCAAAGAACAGAACAAAACTAAGAAACACTTACAAACACCTATTCCGGTAAATAAAGATAAACAAAATGATGAAATTGGAATGAATGACTTACCAGTGTCAACTAAGGATCTTCACGGAAAATATGTTATAGCCAAATTCAAAACTGATAAAAGAACACGTCACTATGTAGGCAAAGTCCTTATGGTAAACGATCAAGAAAAGAAATGTAAGATAGATTTTCTAAGAAAAAAAGCGGTATGTGATAACATTGTTAGTTTCGTAAAACCAAATGTATCTGATGTGTCTGAAGTAGATTTTGAAGACATAGAACGTGTATTAAAGTTCAACCGTCACCGCCTGAAGGTGTATGCTCTTTGCAACAAGCGCGCCATGAGTCACTACCTTCCTCTGGACCGGATGGTCTTCGTGGACTACCCCGAGGACAGTGACTAA
- Protein Sequence
- MDHKKKYNRFQYSQQALEAALKSIANGELSINKASNVYKIPKSTLHNKITNKVPLQRKMGPQSELTIDEEAKISDWIINKAKLGFPMHPEEVFDTVENFMTTNNRKNKFIGNRPGKKWLSLFLKRHPEITKRNAEIISKGRAAVTEQAIRAWFKELEEFLTEEQALDIKDDPSRIFNADETGVMTCPKTGIILGPKNYRNTYEISGGKEKESLTVLCNFAADGRDVPPFVIYPYKRMPPAVIQNFPDTWFMGRSDSGWMVSNTFFSYIQMFYDWLVQKKIQLPVLLFLDGHKSHINQEMFTFCQEKRILIFCLYPNATHILQPCDVGIFGPIKKSWRKIVRKNKQNSTASITKHNFAIKFKEAYTSGLKVETIKHAFRACGLYPLNADGVDYSKCISTRREEINGQIALNHDNRILDERKDDMRSTIKIIETEVGQSIRNEFVQAYLTKNKHQHAYFSLWFKCRKELDGVRDVSRGASMEAPDANNSSQNAPLDLSNTSTSILQSLSNTQLLHGDIQPVINSEADPCSITFHDQDLTNFIVRSFVRFNNISNCSEYLKDYTENLNETTEIVEFIINSELNPPTVIPLPWYDTPQAGTSLDIRTELFLSDGPSTSSTPILFIESNPEIENNSSMNVCTITEDDIQPVVNSNKIDSFLGYPKIASEKKAAKVKKPNPMPFGLTGQRYKAYVEKIQEEKRSKEEDKINEKKRKLEAKENEKRRKLEEKENKKKDREEKLSQKRKEQNKTKKHLQTPIPVNKDKQNDEIGMNDLPVSTKDLHGKYVIAKFKTDKRTRHYVGKVLMVNDQEKKCKIDFLRKKAVCDNIVSFVKPNVSDVSEVDFEDIERVLKFNRHRLKVYALCNKRAMSHYLPLDRMVFVDYPEDSD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00147233; iTF_00888161; iTF_00906977; iTF_01025962; iTF_00685356; iTF_01119246; iTF_01439822; iTF_01119247; iTF_01439823; iTF_01439824; iTF_00851697; iTF_01025969; iTF_01439825; iTF_00851698; iTF_00040723; iTF_00888179; iTF_00888180; iTF_00042552; iTF_01440925; iTF_01440926; iTF_01440927; iTF_00888160; iTF_00071318; iTF_00685355; iTF_01063693; iTF_01063694; iTF_00071316; iTF_00071317; iTF_01533851; iTF_01440924; iTF_01533852; iTF_00445045; iTF_00445044; iTF_00850551;
- 90% Identity
- iTF_01063693;
- 80% Identity
- -