Basic Information

Insect: Noctua janthina
Gene Symbol: -
Assembly: GCA_963576755.1
Location: OY755066.1:3065390-3071672[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 3.5e-13 6.4e-10 39.3 0.0 4 39 16 51 13 57 0.86

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	3.5e-13	6.4e-10	39.3	0.0	4	39	16	51	13	57	0.86

Sequence Information

Coding Sequence: ATGGATCACAAAAAGAAGTACAATAGGTTTCAATACAGTCAACAAGCACTTGAAGCAGCTCTTAAATCAATTGCTAATGGAGAACTAAGTATCAATAAAGCAAGCAATGTGTACAAGATACCAAAATCgactttacataataaaatcacaaacaagGTACCTTTGCAAAGAAAAATGGGCCCTCAGTCCGAGCTTACTGTAGATGAAGAAGCTAAGATTTCTGACTGGATTATAAATAAAGCTAAATTAGGTTTTCCAATGCACCCAGAAGAAGTTTTCGATACTGTTGAAAATTTTATGACCACTAATAATAGGAAAAATAAGTTCATCGGGAATAGACCAGGAAAAAAGTGGCTTAGTTTATTCTTAAAAAGGCATCCTGAGATTACAAAAAGGAATGCGGAGATTATTTCCAAAGGCAGAGCCGCAGTTACTGAACAAGCTATCAGAGCTTGGTTCAAGGAACTCGAAGAGTTTTTAACAGAAGAACAAGCATTGGATATAAAAGACGACCCCAGTCGCATATTTAATGCCGACGAAACAGGTGTAATGACCTGCCCGAAAACCGGAATAATATTGGGGCCCAAAAATTACAGAAACACTTACGAGATTTCGGGTGGGAAAGAAAAAGAATCACTTACAGTTCTATGTAATTTTGCAGCAGATGGGAGGAATGTTCCTCCATTTGTCATATACCCTTACAAACGAATGCCTCCGGCTGTGATACAAAATTTTCCAGATACCTGGTTTATGGGGCGATCAGACAGTGGATGGATGGTGTCcaacacttttttttcatacatacaAATGTTTTACGATTGGCTGGTTAAGAATGAAATACAATTACCGGTTTTACTTTTTCTTGATGGCCACAAATCTCATATAAACCAGGAAATGTTTACGTTTTGTCAGGAAAAGCGAATATTAATATTCTGCTTATATCCGAATGCCACGCACATATTACAGCCCTGTGATGTCGGCATTTTTGGCCCCATAAAAAAGTGTTGGCGGAAAATCGTgcgcaaaaataaacaaaattctacAGCATccataacaaaacataatttcgcaataaaatttaaagaagCCTACACCAGTGGATTAAAAGTTGAAACCATAAAACATGCTTTTAGGGCATGTGGACTATATCTTTTAAATGCAGACGGAGTTGACTATTCAAAATGCATTAGCACTCGAAGAGAGGAAATTAATGGGCAAATTGCTCTTAATCGTGATAACCGAATTCTAGAGGAGAGAAAGGACGATATGAGGAgcactattaaaataattgaaacagaAGTAGGTCAAAGTATCAGAAACGAATTCGTTCAGGCTTACTTGACCAAGAATACGCATCAGCATGCATATTTTTCACTCTGGTTCAAATGTCGCAAAGAACTCGATGGTGTTAGAGATGTGTCTAGAGGAGCATCAATGGAGGCACCAGATGCTAACAATTGCTCCCAAAATGCTCCTCTCGATTTATCCAATACGTCGACTTCTATACTTCAATCATTATCTAACACACAATTATTGCTTGGAGACATACAACCCGTCATTAATTCCGAAGCAGACCCGTGCTCCATCACATTTCATGACCAAGATTTGACAAATTTTATCGTTCCTAGTCTGAcggattttaataatatttctaattGTTCAGAATATCTTAAAGACTATACGGAAAATCTAAATGAAACCACCGAAATAGTAGAGTTTATAATTAATAGTGAATTGAATCCACCAACCGTAATTCCTCTTCCATGGTATGATACTCCACAAGCTGGTACATCGTTAGACATTAGAACAGAATTGTTTCTAAGCGATGGACCTTCTACATCTTCTACtcctatattatttattgaaagtaATCCAGAAATTGAAAACAATAGTTCTATGAATGTGTGTACAATCACGGAGGACGATATTCAGCCAGTTGCTAACTCAAATAAAATCGACAGCTTTCTGGGGTATCCAAAAATCGCTTCGGAAAAAAAAGCAGCCAAAGTAAAAAAACCTAATCCCATGCCGTTTGGATTAACAGGCCAACGATACAAAGCGTATGTAGAAAAGATACAAGAAGAAAAGAGAtcaaaagaagaagacaaaatcaatgaaaaaaaaaggaaattagaggcaaaagaaaatgaaaaacgaagaaaactggaagaaaaagaaaacaaaaagaaggaTAGAGAAGAAAAGCTTTTACAAAAACGCAAAGAACAGAACAAAACTGAGAAACACTTACAAACACGTAGTCCgGGCCGGTGCACATGGTGCGTTGCGCTGGTGGTGTCGCAGCGGCGTCCAGCTTATAAAAATCCAAGGTGTGGTGGTGCCGCCGCCGCGCTGCACGCACACCGGACATGCTACCTGCGAGACGAGGCGAGAGATGTATGCGTTGCGACGCCGCAGCGGCACCGCTCAGTTGTTTATGTGGCAAAAGCTCTGTTCGTCTGTCAGCAACTCTCTATATTCTTGATGAATGAACTGTCTAACAACTAA
Protein Sequence: MDHKKKYNRFQYSQQALEAALKSIANGELSINKASNVYKIPKSTLHNKITNKVPLQRKMGPQSELTVDEEAKISDWIINKAKLGFPMHPEEVFDTVENFMTTNNRKNKFIGNRPGKKWLSLFLKRHPEITKRNAEIISKGRAAVTEQAIRAWFKELEEFLTEEQALDIKDDPSRIFNADETGVMTCPKTGIILGPKNYRNTYEISGGKEKESLTVLCNFAADGRNVPPFVIYPYKRMPPAVIQNFPDTWFMGRSDSGWMVSNTFFSYIQMFYDWLVKNEIQLPVLLFLDGHKSHINQEMFTFCQEKRILIFCLYPNATHILQPCDVGIFGPIKKCWRKIVRKNKQNSTASITKHNFAIKFKEAYTSGLKVETIKHAFRACGLYLLNADGVDYSKCISTRREEINGQIALNRDNRILEERKDDMRSTIKIIETEVGQSIRNEFVQAYLTKNTHQHAYFSLWFKCRKELDGVRDVSRGASMEAPDANNCSQNAPLDLSNTSTSILQSLSNTQLLLGDIQPVINSEADPCSITFHDQDLTNFIVPSLTDFNNISNCSEYLKDYTENLNETTEIVEFIINSELNPPTVIPLPWYDTPQAGTSLDIRTELFLSDGPSTSSTPILFIESNPEIENNSSMNVCTITEDDIQPVANSNKIDSFLGYPKIASEKKAAKVKKPNPMPFGLTGQRYKAYVEKIQEEKRSKEEDKINEKKRKLEAKENEKRRKLEEKENKKKDREEKLLQKRKEQNKTEKHLQTRSPGRCTWCVALVVSQRRPAYKNPRCGGAAAALHAHRTCYLRDEARDVCVATPQRHRSVVYVAKALFVCQQLSIFLMNELSNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00147234;
90% Identity: iTF_00888180; iTF_00888161; iTF_00906977; iTF_01025962; iTF_00685355; iTF_00685356; iTF_01119246; iTF_01119247; iTF_00851697; iTF_01025969; iTF_00851698; iTF_00888179; iTF_00042552; iTF_01533852; iTF_00888160; iTF_00071318; iTF_00040723; iTF_00071316; iTF_00071317; iTF_01533851; iTF_01440924; iTF_00147234; iTF_00147233; iTF_01439822; iTF_01439823; iTF_01439825; iTF_01440925; iTF_01440926; iTF_01439824; iTF_01440927; iTF_00850551;
80% Identity: -