Basic Information

Insect: Diarsia brunnea
Gene Symbol: -
Assembly: GCA_949774965.1
Location: OX459021.1:7035949-7038555[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.7e-12 7e-10 39.5 0.0 4 39 16 51 13 57 0.86

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.7e-12	7e-10	39.5	0.0	4	39	16	51	13	57	0.86

Sequence Information

Coding Sequence: ATGGATCACAAAAAGAAGTACAATAGGTTTCAATACAGTCAACAAGCACTTGAAGCAGCTCTTAAGTCAATTGCTAATGGAGAACTAAGTATCAATAAAGCAAGCAATGTGTACAAGATACCAAAATCgactttacataataaaatcacaaacaaGGTACCTTTGCAAAGAAAAATGGGCCCTCAGTCCGAGCTTACTGTAGATGAAGAAGCTAAGATTTCTGACTGGATTATAAATAAAGCTAAATTAGGTTTTCCAATGCACCCAGATGAAGTTTTCGATACTGTTGAAAATTTTATGACCACTAATAATAGgaaaaataagtttatcggGAATAGACCAGGAAAAAAGTGGCTTAGTTTATTCTTAAAAAGGCATCCTGAGATTACAAAAAGGAATGCGGAGATTATATCCAAAGGCAGAGCCGCAGTTACTGAACAAGCTATCAGAGCTTGGTTCAAGGAACTTGAAGAGTTTTTAACAGAAGAACAAGCATTGGATATAAAAGACGACCCTAGTCGCATATTTAATGCCGACGAAACAGGTGTAATGACCTGCCCGAAAACCGGAATAATATTGGGGCCCAAAAATTACAGAAACACTTACGAGATTTCGGGTGGGAAAGAAAAAGAATCACTTACAGTTCTATGTAACTTTGCAGCAGATGGGAGAGATGTTCCTCCATTTGTCATATACCCTTACAAACGAATGCCTCCGGCTGTGATACAAAATTTTCCAGATACCTGGGCATGTGGACTATATCCTTTAAATGCAGACGGAGTTGAGTATTCAAAATGCATTAGCACTCGACGAGAGGAAATTAATGGGCAAATTGCTCTTAATCGTGATAACCTAATTCTAGAGGAGAGAAAGGACGATATGAGGAGCActattaaaattattgaaacaGAAGTAGGTCAAAGTATCAGAAACGAATTCGTTCAGGCTTACTTGACCAAGAATACGCATCAGCATGCATATTTTTCACTCTGGTTCAAATGTCGCAAAGAACTCGATGGTGTTAGAGATGTGTCTAGAGGACCATCAATGGATGCACCAGATGCTAACAATTCCTCCCAAAATGCTCCTCTCGATTTATCCAATACGTCGACTTCTATACTTCAATCATTATCTAACACACAATTATTGGATGGAGACATACAACCCGTCATTAATTCCGAAGCAGACCCGTGCTCCATCACATTTCATGACCAAGATTTGACAAATTTTATCGTTCCTAGTCTGacggattttaataatatttctaattGTTCAGAATATCTTAAAGACTATACGGAAAATCTAAATGAAACCACCGAAATAGTAGAGTTTATAATTAATAGTGAATTGAATCCACCAACCGTAATTCCTCTTCCATGGTATGATACTCCACAAGCTGGTACATCGTTAGACATTAGAACAGAATTGTTTCTAAGCGATGGACCTTCTACATCTTCTACtcctatattatttattgaaagtaatcCAGAAATTGAAAACAATAGTTCTATGAATGTGTGTACAATCACGGAGGACGATATTCAGCCAGTTGTTAACTCAAATAAAATCGACAGCTTTCTGGGGTATCCAAAAATCGCTTCGGAAAAAAAAGCAGCCAAAGTAAAAAAACCTAATCCCATGCCGTTTGGATTAACAGGCCAACGATACAAAGCGTATGTAGAAAAGATACAAGAAGAAAAGAGATCAAAAGAAGAAgataaaatcaatgaaaaaaaaaggaaattagaggcaaaagaaaatgaaaaacgaAGAAAActggaagaaaaagaaaacaaaaagaaggATAGAGAAGAAAAGCTTTCACAAAAACGCAAAGAACAGAACAAAACTGAGAAACACTTACAAACACCTAGTCCGGTAAATGAAGATAAACAAAATGATGAAATTGGAATGAATGACTTACCAGTGTCAACTAAGGATCTTCACGGAAAATATGTTATGGCCAAATTCAAAACTGATAAAAGAACACGTCACTATGTAGGCAAAGTCCTTATGGTAAACGATCAAGAAAAGAAATGTAAGATAgattttctaagaaaaaaagCGGTATGTGATAACATTGTTAGTTTCGTAAAACCAAATGTACCTGATGTGTCTGAAGTAGATTTTGAAGACATAGAACGTGTATTAAGTGAGCCTGCTTATTCCAGACGTGGATTGATCTCTTTTAATAATGTAACATTTAGCGATATAGaataa
Protein Sequence: MDHKKKYNRFQYSQQALEAALKSIANGELSINKASNVYKIPKSTLHNKITNKVPLQRKMGPQSELTVDEEAKISDWIINKAKLGFPMHPDEVFDTVENFMTTNNRKNKFIGNRPGKKWLSLFLKRHPEITKRNAEIISKGRAAVTEQAIRAWFKELEEFLTEEQALDIKDDPSRIFNADETGVMTCPKTGIILGPKNYRNTYEISGGKEKESLTVLCNFAADGRDVPPFVIYPYKRMPPAVIQNFPDTWACGLYPLNADGVEYSKCISTRREEINGQIALNRDNLILEERKDDMRSTIKIIETEVGQSIRNEFVQAYLTKNTHQHAYFSLWFKCRKELDGVRDVSRGPSMDAPDANNSSQNAPLDLSNTSTSILQSLSNTQLLDGDIQPVINSEADPCSITFHDQDLTNFIVPSLTDFNNISNCSEYLKDYTENLNETTEIVEFIINSELNPPTVIPLPWYDTPQAGTSLDIRTELFLSDGPSTSSTPILFIESNPEIENNSSMNVCTITEDDIQPVVNSNKIDSFLGYPKIASEKKAAKVKKPNPMPFGLTGQRYKAYVEKIQEEKRSKEEDKINEKKRKLEAKENEKRRKLEEKENKKKDREEKLSQKRKEQNKTEKHLQTPSPVNEDKQNDEIGMNDLPVSTKDLHGKYVMAKFKTDKRTRHYVGKVLMVNDQEKKCKIDFLRKKAVCDNIVSFVKPNVPDVSEVDFEDIERVLSEPAYSRRGLISFNNVTFSDIE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00147234;
90% Identity: iTF_00147231;
80% Identity: iTF_00445044;