Taur027460.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Tiliacea aurago
Gene Symbol
-
Assembly
GCA_948098905.1
Location
OX402602.1:15938823-15941429[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.8e-12 6.5e-10 39.2 0.0 4 39 16 51 13 57 0.86

Sequence Information

Coding Sequence
ATGGATCACAAAAAGAAGTACAATAGGTTTCAATACAGTCAACAAGCACTTGAAGCAGCTCTTAAGTCAATTGCTAATGGAGAACTAAGTATCAATAAAGCAAGCAATGTGTACAAGATACCAAAATCGACTTTACATAATAAAATCACAAACAAGGTACCTTTGCAAAGAAAAATGGGCCCTCAGTCCGAGCTTACTGTAGATGAAGAAGCTAAGATTTCTGACTGGATTATAAATAAAGCTAAATTAGGTTTTCCAATGCACCCAGAAGAAGTTTTCGATACTGTTGAAAATTTTATGACCACTAATAATAGGAAAAATAAGTTTATCGGGAATAGACCAGGAAAAAAGTGGCTTAGTTTATTCTTAAAAAGGCATCCTGAGATTACAAAAAGGAATGCGGAGATTATATCCAAAGGTAGAGCCGCAGTTACTGAACAAGCTATCAGAGCTTGGTTCAAGGAACTCGAAGAGTTTTTAACAGAAGAACAAGCATTGGATATAAAAGACGACCCCAGTCGCATATTTAATGCCGACGAAACAGGTGTAATGACCTGCCCGAAAACCGGAATAATATTGGGGCCCAAAAATTACAGAAACACTTACGAGATTTCGGGTGGGAAAGAAAAAGAATCACTTACAGTTCTATGTAATTTTGCAGCAGATGGGAGGGATGTTCCTCCATTTGTCATATACCCTTACAAACGAATGCCTCCGGCTGTGATACAAAATTTTCCAGATACCTGGTTTATGGGGCGATCAGACAGTGGATGGATGGTGTCCAACACTTTTTTTTCATACATACAAATGTTTTACGATTGGCTGGTTCAGAATGAAATACAATTACCGGTTTTACTTTTTCTTGATGGCCACAAATCTCATATAAACCAGGAAATGTTTACGTTTTGTCAGGAAAAGCGAATATTAATATTCTGCTTATATCCGAATGCCACGCACATATTACAGCCCTGTGATGTCGGCATTTTTGGCCCCATAAAAAAGAGTTGGCGGAAAATCGTGCGCAAAAATAAACAAAATTCTACAGCATCCATAACAAAACATAATTTCGCAATAAAATTTAAAGAAGCCTACACCAGTGGATTAAAAGTTGAAACCATAAAACATGCTTTTAGGGCATGTGGACTATATCCTTTAAATGCAGACGGAGTTGACTATTCAAAATGCATTAGCACTCGAAGAGAGGAAATTAATGGGCAAATTGCTCTTAATCGTGATAACCGAATTCTAGAGGAGAGAAAGGACGATATGAGGAGCACTATTAAAATAATTGAAACAGAAGTAGGTCAAAGTATCAGAAACGAATTCGTTCAGGCTTACTTGACCAAGAATACGCATCAGCATGCATATTTTTCACTCTGGTTCAAATGTCGCATAGAACTCGATGGTGTTAGAGATGTGTCTAGAGGAGCATCAATGGAGGCACCAGATGCTAACAATTCCTCCCAAAATGCTCCTCTTGATTTATCCAATACGTCGACTTCTATACTTCAATCATTATCTAACACACAATTATTGCATGGAGACATGCAACCCGTCATTAATTCCGAAGCAGATCCGTGCTCCATCACATTTCATGACCAAGATTTGACAAATTTTAGCGTTCCTAGTCTGACGGATTTTAATAATATTTCTAATTGTTCAGAATATCTTAAACACTATACGGAAAATCTAAATGAAACCACCGAAATAGTAGAGTTTATAATTAATAGTGAATTGAATCCACCAACCGTAATTCCTCTTCCATGGTATGATACTCCACAAGCTGGTACATCGTTAGACATTAGAACAGAATTGTTTCTAAGCGATGGACCTTCTACATCTTCTACTCCTATATTATTTATTGAAAGTAATCCAGAAATTGAAAACAATAGTTCTATGAATGTGTGTACAATCACGGAGGACGATATTCAGCCAGTTGTTAACTCAAATAAAATCGACAGCTTTCTGGGGTATCCAAAAATGGCTTCGGAAAAAAAAGCAGCCAAAGTAAAAAAACCTAATCCCATGCCGTTTGGATTAACAGGCCAACGATACAAAGCGTATGTAGAAAAGATACAAGAAGAAAAGAGATCAAAAGAAGAAGACAAAATCAATGAAAAAAAAAGGAAATTAGAGGCAAAAGAAAATGAAAAACGAAGAAAACTGGAAGAAAAAGAAAACAAAAAGAAGGATAGAGAAGAAAAGCTTTCACAAAAACGCAAAGAACAGAACAAAACTGAGAAACACTTACAAACACCTAGTCCGGTAAATAAAGATAAACAAAATGATGAAATTGGAATGAATGACTTACCAGTGTCAACTAAGGATCTTCACGGAAAATATGTTATGGCCAAATTCAAAACTGATAAAAGAACACGTCACTATGTAGGCAAAGTCCTTATGGTAAACGATCAAGAAAATAAATGTAAGATAGATTTTCTAAGAAAAAAAGCGGTATGTGATAACATTGTTAGTTTCGTAAAACCAAATGTACCTGATGTGTCTGAAGTAGATTTTGAAGACATAGAACGTGTATTAAGTGAGCCTGCTTATTCCAGACGTGGATTGATCTCTTTTAATAATGTAACATTTAGAGATATAGAATAA
Protein Sequence
MDHKKKYNRFQYSQQALEAALKSIANGELSINKASNVYKIPKSTLHNKITNKVPLQRKMGPQSELTVDEEAKISDWIINKAKLGFPMHPEEVFDTVENFMTTNNRKNKFIGNRPGKKWLSLFLKRHPEITKRNAEIISKGRAAVTEQAIRAWFKELEEFLTEEQALDIKDDPSRIFNADETGVMTCPKTGIILGPKNYRNTYEISGGKEKESLTVLCNFAADGRDVPPFVIYPYKRMPPAVIQNFPDTWFMGRSDSGWMVSNTFFSYIQMFYDWLVQNEIQLPVLLFLDGHKSHINQEMFTFCQEKRILIFCLYPNATHILQPCDVGIFGPIKKSWRKIVRKNKQNSTASITKHNFAIKFKEAYTSGLKVETIKHAFRACGLYPLNADGVDYSKCISTRREEINGQIALNRDNRILEERKDDMRSTIKIIETEVGQSIRNEFVQAYLTKNTHQHAYFSLWFKCRIELDGVRDVSRGASMEAPDANNSSQNAPLDLSNTSTSILQSLSNTQLLHGDMQPVINSEADPCSITFHDQDLTNFSVPSLTDFNNISNCSEYLKHYTENLNETTEIVEFIINSELNPPTVIPLPWYDTPQAGTSLDIRTELFLSDGPSTSSTPILFIESNPEIENNSSMNVCTITEDDIQPVVNSNKIDSFLGYPKMASEKKAAKVKKPNPMPFGLTGQRYKAYVEKIQEEKRSKEEDKINEKKRKLEAKENEKRRKLEEKENKKKDREEKLSQKRKEQNKTEKHLQTPSPVNKDKQNDEIGMNDLPVSTKDLHGKYVMAKFKTDKRTRHYVGKVLMVNDQENKCKIDFLRKKAVCDNIVSFVKPNVPDVSEVDFEDIERVLSEPAYSRRGLISFNNVTFRDIE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00147234;
90% Identity
iTF_01063693;
80% Identity
-