Aluc011171.1
Basic Information
- Insect
- Apolygus lucorum
- Gene Symbol
- retn
- Assembly
- GCA_009739505.2
- Location
- CM019167.2:85191057-85236328[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.2e-21 1.6e-17 63.8 0.0 15 89 2 74 1 74 0.95 2 2 3 5.9e+03 -2.1 0.0 26 38 224 236 178 237 0.63
Sequence Information
- Coding Sequence
- ATGCAAGAAGGTACGCCCATAAACCGACTTCCCATCATGGCCAAGTCAGTGCTGGACCTCTACGAACTGTACAATCTGGTCATCCAGCGAGGAGGCCTCGTCGACGTGATCAACAAGAAATTATGGCAGGAAATCATTAAAGGACTCCATCTGCCTTCATCCATCACATCTGCAGCTTTCACACTAAGAACACAGTATATGAAGTACCTCTACCCGTACGAATGCGAGAAGCGGCGGCTAAGCACGCCGGGGGAGCTACAGGCAGCGATCGACGGGAATCGACGGGAGGGGCGGCGCGGGAGCTACGGTACCTACGCGGAGATGATGCAGAGGAGCCCGGGGGCGGCGTTCGGTGGCGGAGGGGGCGGACCGGTCGGGTCTCCTCTCAGCCTTGTGACCGCACGCGCGGCCGCCGCCCTCAACGGATCTCACcaccacaacaacaacaaccacATACCGCCCCACCAGGCGGCCGCCGCCGCTCTCCTCCCACCTCCCATCACCGGATCGGCCGGTATGGCTCCAGCAGAATTTGAGGCCAGGATGGTGGAGTACGTCAAACTGTTGAACAAAGAATTGAGAACTTCGGCTACTACTCCCCCGATAAACAACAGACAAGGTTCGCCCCCGGGTTCTCCTCCCGAAGGCACCGCAGCGGGGATCAACCCTCTGGAGATGTCGAGGCTAACGCTTTGGAACCTGTACCACACGCCAGAGCCCCAAAAAGAGGCTCTCAACCTGGAGAAAAGGGACGaccctctccccccaccaccaccgaAAAGGCACTATCCTGATAATAGTCAGGATGACACGCCTAACAACACTATTAGTGGGACACATATAAAAATATCCAGCAGAGGAGACGGGCGAGGTGGAAACGACAACTCCCTTGTAGTCAGTATGGATATAAACGGGACCATGTATCAAGGCGTCCTGTTCGCACAATCTGCGCGCAGTAATAGGCTACAAtcatga
- Protein Sequence
- MQEGTPINRLPIMAKSVLDLYELYNLVIQRGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKRRLSTPGELQAAIDGNRREGRRGSYGTYAEMMQRSPGAAFGGGGGGPVGSPLSLVTARAAAALNGSHHHNNNNHIPPHQAAAAALLPPPITGSAGMAPAEFEARMVEYVKLLNKELRTSATTPPINNRQGSPPGSPPEGTAAGINPLEMSRLTLWNLYHTPEPQKEALNLEKRDDPLPPPPPKRHYPDNSQDDTPNNTISGTHIKISSRGDGRGGNDNSLVVSMDINGTMYQGVLFAQSARSNRLQS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01365190; iTF_01500133; iTF_00386080; iTF_00930103;
- 90% Identity
- iTF_00930103;
- 80% Identity
- -