Cdil018354.1
Basic Information
- Insect
- Creontiades dilutus
- Gene Symbol
- retn
- Assembly
- GCA_031894815.1
- Location
- JAVIWC010002765.1:3112648-3123555[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.4e-20 9.9e-17 62.4 0.0 16 89 7 78 2 78 0.94 2 2 4.3 1.8e+04 -2.5 0.0 26 38 229 241 185 242 0.66
Sequence Information
- Coding Sequence
- ATGAGTCACTCTTGTGTTTCAGGTACACCCATAAACCGACTACCCATCATGGCCAAGTCGGTCCTGGATCTCTACGAACTTTACAATTTGGTCATCCAACGAGGAGGCCTCGTAGATGTTATAAACAAGAAATTATGGCAAGAAATAATCAAAGGTCTTCACCTCCCTTCTTCCATAACCTCAGCTGCTTTTACGCTACGAACACAATACATGAAATACCTGTACCCGTACGAGTGTGAGAAGCGGCGGTTGAGCACGCCGGGTGAGCTGCAGGCGGCGATCGACGGGAATCGGCGGGAGGGGCGGCGCGGGAGCTACGGCACCTACGCGGAGATGATGCAGAGAAGCCCGGGGGCGGCGTTCGGAGGAGGCGGGGGCGGGCCGGCCGGCTCCGCTCTCAGCCTCGTGACGGCTCGCGCAGCCGCCGCCCTCAACGGCTCTCACCatcacaacaacaacaaccacATACCGCCCCACCAGGCCGCCGCCGCTGCCGCCCTCCTTCCTCCACCCATCACGGggTCTGCTGGCATGGCACCTGCAGAATTCGAGGCGAGAATGGTTGAATATGTTAAACTTTTGAATAAAGAATTGCGGACTTCCGCAACAACACCACCAATAAACAACAGACAAAGTTCACCTCCCGGTTCACCCCCAGAAGGAACTGCTGCGGGGATAAATCCGCTAGAGATGTCAAGGCTCACACTGTGGAACCTGTACCATACTCCCGAGCCCCAAAAAGAGGCGCTCAACCTGGAGAAACGGGATGATCCTCTCCCACCTCCACCACCGAAACGACATTATCCAGATAACAATCAGGATGAGCCACCTAACAATGCTATCAGTGGAGCACATATAAAAATTTCTAGCAGAGGCGATGGGCGCGGTGGGAATGAGAATTCTCTCGTGGTCAGTATGGATATAAATGGGACCATGTACCAAGGTGTACTCTTCGCACAATCTGCGCGCAGTAATAGACTACAATCATGA
- Protein Sequence
- MSHSCVSGTPINRLPIMAKSVLDLYELYNLVIQRGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKRRLSTPGELQAAIDGNRREGRRGSYGTYAEMMQRSPGAAFGGGGGGPAGSALSLVTARAAAALNGSHHHNNNNHIPPHQAAAAAALLPPPITGSAGMAPAEFEARMVEYVKLLNKELRTSATTPPINNRQSSPPGSPPEGTAAGINPLEMSRLTLWNLYHTPEPQKEALNLEKRDDPLPPPPPKRHYPDNNQDEPPNNAISGAHIKISSRGDGRGGNENSLVVSMDINGTMYQGVLFAQSARSNRLQS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00145334;
- 90% Identity
- iTF_00930103;
- 80% Identity
- -