Alab035106.1
Basic Information
- Insect
- Apis laboriosa
- Gene Symbol
- SUB1
- Assembly
- GCA_014066325.1
- Location
- JACEOM010004364.1:660103-661251[+]
Transcription Factor Domain
- TF Family
- PC4
- Domain
- PC4 domain
- PFAM
- PF02229
- TF Group
- Unclassified Structure
- Description
- This domain is found at the C-terminal end of Activated RNA polymerase II transcriptional coactivator p15 from humans, YdbC from Lactococcus lactis, and other PC4 family members. p15 has a bipartite structure composed of an N-terminal regulatory domain and a carboxy-terminal cryptic DNA-binding domain [1-4]. Activity is controlled by protein kinases that target the regulatory domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.02 7.6e+02 0.7 0.2 29 37 16 24 7 24 0.87 2 2 2.2e-26 8.3e-22 77.4 0.4 1 51 55 106 55 107 0.96
Sequence Information
- Coding Sequence
- atgccGAAATCAAAGGAATATGTGTCTACGGATGATGACAGTAGTGATgaggaaATGAAACcaaagaaaaagcaaaaaagagaaatagaagataaagaagagaaagtatcaaaaaagttaaaaaatgaatctaaTAAAGATGAATCTAATAAAGATACTGTCTGGGATTTAGGAAATAATCGTCAAATCAGTGTAAGAGActttaaaggaaaattatatgtCGACATCAGAGAAATGTATTATGATAAAGAAGCAAATTTAAAACCTGGAAAAAAAggtaTTTGCTTAAATGTAAcgcaatggaaaaaattactaaatgtTATGGATGATGTGGACAAAGCTGTAAAATCtaaatcttga
- Protein Sequence
- MPKSKEYVSTDDDSSDEEMKPKKKQKREIEDKEEKVSKKLKNESNKDESNKDTVWDLGNNRQISVRDFKGKLYVDIREMYYDKEANLKPGKKGICLNVTQWKKLLNVMDDVDKAVKSKS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01071030;
- 90% Identity
- iTF_00142473; iTF_00141235; iTF_00140597;
- 80% Identity
- iTF_00141235;